RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W TY1B-PR1P0C2I9 1755 aaKnown RBP0.65□□□□□ -2.31
CIC1YHR052W TY2B-CP25384 1770 aa0.65□□□□□ -2.31
CIC1YHR052W TY1B-JR1P47098 1755 aa0.65□□□□□ -2.31
CIC1YHR052W TY1B-ML2Q03434 1755 aaKnown RBP0.65□□□□□ -2.31
CIC1YHR052W TY1B-ER1Q03612 1755 aa0.65□□□□□ -2.31
CIC1YHR052W TY1B-ER2Q03619 1755 aa0.65□□□□□ -2.31
CIC1YHR052W TY1B-ML1Q04711 1755 aaKnown RBP0.65□□□□□ -2.31
CIC1YHR052W TY1B-LR1Q12088 1755 aaKnown RBP0.65□□□□□ -2.31
CIC1YHR052W TY1B-GR2Q12269 1755 aa0.65□□□□□ -2.31
CIC1YHR052W TY1B-OLQ12273 1755 aa0.65□□□□□ -2.31
CIC1YHR052W TY2B-DR1Q12472 1770 aa0.65□□□□□ -2.31
CIC1YHR052W PDR5P33302 1511 aaKnown RBP0.64□□□□□ -2.31
CIC1YHR052W RPC10P40422 70 aa0.64□□□□□ -2.31
CIC1YHR052W PMD1P32634 1753 aa0.64□□□□□ -2.31
CIC1YHR052W HKR1P41809 1802 aa0.64□□□□□ -2.31
CIC1YHR052W BRR2P32639 2163 aaKnown RBP0.63□□□□□ -2.31
CIC1YHR052W SPI1P40092 148 aa0.63□□□□□ -2.31
CIC1YHR052W EDC1P53080 175 aaPredicted RBP0.63□□□□□ -2.31
CIC1YHR052W YOL131WQ08270 108 aa0.63□□□□□ -2.31
CIC1YHR052W YIL102C-AQ2V2P5 75 aa0.63□□□□□ -2.31
CIC1YHR052W YGR035W-AQ45U48 73 aa0.63□□□□□ -2.31
CIC1YHR052W DNF2Q12675 1612 aa0.63□□□□□ -2.31
CIC1YHR052W SEC16P48415 2195 aaKnown RBP0.63□□□□□ -2.31
CIC1YHR052W TY3B-GQ99315 1547 aa0.63□□□□□ -2.31
CIC1YHR052W TY2B-LR1P0C2J3 1770 aa0.62□□□□□ -2.31
CIC1YHR052W TY2B-FP0CX63 1770 aa0.62□□□□□ -2.31
CIC1YHR052W TY2B-GR2P0CX64 1770 aa0.62□□□□□ -2.31
CIC1YHR052W TY2B-DR2Q03494 1770 aa0.62□□□□□ -2.31
CIC1YHR052W TY2B-OR1Q12113 1770 aa0.62□□□□□ -2.31
CIC1YHR052W TY2B-BQ12491 1770 aa0.62□□□□□ -2.31
CIC1YHR052W TY2B-OR2Q12501 1770 aa0.62□□□□□ -2.31
CIC1YHR052W ARO1P08566 1588 aaKnown RBP0.62□□□□□ -2.31
CIC1YHR052W VMR1P38735 1592 aa0.62□□□□□ -2.31
CIC1YHR052W RPO21P04050 1733 aaKnown RBP0.62□□□□□ -2.31
CIC1YHR052W AUA1P32450 94 aa0.62□□□□□ -2.31
CIC1YHR052W VMA9Q3E7B6 73 aa0.62□□□□□ -2.31
CIC1YHR052W FKS3Q04952 1785 aa0.62□□□□□ -2.31
CIC1YHR052W TY2B-DR3Q07791 1770 aaKnown RBP0.62□□□□□ -2.31
CIC1YHR052W YDL022C-AP0C5L6 82 aa0.61□□□□□ -2.31
CIC1YHR052W YFR009W-AP0C5M9 85 aa0.61□□□□□ -2.31
CIC1YHR052W YDR182W-AQ3E796 67 aa0.61□□□□□ -2.31
CIC1YHR052W YKL018C-AQ3E7A7 99 aa0.61□□□□□ -2.31
CIC1YHR052W YOR032W-AQ8TGS1 66 aa0.61□□□□□ -2.31
CIC1YHR052W BCK1Q01389 1478 aa0.61□□□□□ -2.31
CIC1YHR052W STT4P37297 1900 aa0.6□□□□□ -2.31
CIC1YHR052W YFR010W-AP0C5N0 62 aa0.6□□□□□ -2.31
CIC1YHR052W RPS29BP41058 56 aaKnown RBP0.6□□□□□ -2.31
CIC1YHR052W YNL190WP53872 204 aa0.6□□□□□ -2.31
CIC1YHR052W ERI1P62651 68 aaKnown RBP0.6□□□□□ -2.31
CIC1YHR052W HFA1P32874 2273 aa0.6□□□□□ -2.31
CIC1YHR052W IRC20Q06554 1556 aa0.6□□□□□ -2.31
CIC1YHR052W SNF2P22082 1703 aa0.59□□□□□ -2.31
CIC1YHR052W YBL039W-BP0C268 59 aa0.59□□□□□ -2.31
CIC1YHR052W RPS30AP0CX33 63 aaKnown RBP0.59□□□□□ -2.31
CIC1YHR052W RPS30BP0CX34 63 aaKnown RBP0.59□□□□□ -2.31
CIC1YHR052W SIP18P50263 79 aa0.59□□□□□ -2.31
CIC1YHR052W MON2P48563 1636 aaPredicted RBP0.59□□□□□ -2.32
CIC1YHR052W SNQ2P32568 1501 aaKnown RBP0.59□□□□□ -2.32
CIC1YHR052W PDR12Q02785 1511 aa0.59□□□□□ -2.32
CIC1YHR052W SSK2P53599 1579 aa0.58□□□□□ -2.32
CIC1YHR052W YOR011W-AQ3E807 68 aa0.58□□□□□ -2.32
CIC1YHR052W YCF1P39109 1515 aaKnown RBP0.58□□□□□ -2.32
CIC1YHR052W VTH1P40438 1549 aa0.58□□□□□ -2.32
CIC1YHR052W VTH2P40890 1549 aa0.58□□□□□ -2.32
CIC1YHR052W USO1P25386 1790 aa0.57□□□□□ -2.32
CIC1YHR052W YBT1P32386 1661 aa0.57□□□□□ -2.32
CIC1YHR052W YLR157W-DP0CE99 70 aa0.57□□□□□ -2.32
CIC1YHR052W YGR025WP53216 100 aa0.57□□□□□ -2.32
CIC1YHR052W YKL023C-AQ2V2P3 75 aa0.57□□□□□ -2.32
CIC1YHR052W YOR008C-AQ3E7B9 74 aa0.57□□□□□ -2.32
CIC1YHR052W YMR001C-AQ8TGS9 76 aa0.57□□□□□ -2.32
CIC1YHR052W CDC25P04821 1589 aa0.57□□□□□ -2.32
CIC1YHR052W TY1B-DR4Q07793 1604 aa0.56□□□□□ -2.32
CIC1YHR052W SPT6P23615 1451 aaKnown RBP0.56□□□□□ -2.32
CIC1YHR052W PDR15Q04182 1529 aaKnown RBP0.56□□□□□ -2.32
CIC1YHR052W YBR230W-AQ3E762 66 aa0.56□□□□□ -2.32
CIC1YHR052W COA2Q3E823 68 aa0.56□□□□□ -2.32
CIC1YHR052W YOR394C-AQ8TGJ0 55 aa0.56□□□□□ -2.32
CIC1YHR052W POL2P21951 2222 aaKnown RBP0.56□□□□□ -2.32
CIC1YHR052W YBR200W-AQ3E755 54 aa0.55□□□□□ -2.32
CIC1YHR052W NUP188P52593 1655 aaKnown RBP0.54□□□□□ -2.32
CIC1YHR052W YDR246W-AQ3E763 66 aa0.54□□□□□ -2.32
CIC1YHR052W ULS1Q08562 1619 aa0.53□□□□□ -2.32
CIC1YHR052W YBR016WP38216 128 aa0.53□□□□□ -2.32
CIC1YHR052W HAP1P0CE41 1502 aa0.53□□□□□ -2.33
CIC1YHR052W RKR1Q04781 1562 aa0.53□□□□□ -2.33
CIC1YHR052W BLM10P43583 2143 aa0.52□□□□□ -2.33
CIC1YHR052W YOR093CQ12275 1648 aa0.52□□□□□ -2.33
CIC1YHR052W RPS27AP35997 82 aaKnown RBP0.51□□□□□ -2.33
CIC1YHR052W YBL044WP38194 122 aa0.51□□□□□ -2.33
CIC1YHR052W NUP192P47054 1683 aa0.51□□□□□ -2.33
CIC1YHR052W YOL166W-AQ8TGJ1 51 aa0.5□□□□□ -2.33
CIC1YHR052W URA2P07259 2214 aaKnown RBP0.5□□□□□ -2.33
CIC1YHR052W THO2P53552 1597 aaKnown RBP0.49□□□□□ -2.33
CIC1YHR052W NUP170P38181 1502 aa0.49□□□□□ -2.33
CIC1YHR052W STU1P38198 1513 aa0.49□□□□□ -2.33
CIC1YHR052W TOS6P48560 102 aa0.49□□□□□ -2.33
CIC1YHR052W YGL258W-AQ3E740 77 aa0.49□□□□□ -2.33
CIC1YHR052W YCR108CQ3E819 63 aa0.49□□□□□ -2.33
CIC1YHR052W BUD3P25558 1636 aa0.49□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms