RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEM1YHR004C PDR5P33302 1511 aaKnown RBP1.65□□□□□ -2.15
NEM1YHR004C DNF3Q12674 1656 aa1.65□□□□□ -2.15
NEM1YHR004C YLR146W-AQ2V2P1 62 aa1.65□□□□□ -2.15
NEM1YHR004C POL2P21951 2222 aaKnown RBP1.64□□□□□ -2.15
NEM1YHR004C YNL190WP53872 204 aa1.64□□□□□ -2.15
NEM1YHR004C YLR307C-AQ3E825 87 aa1.64□□□□□ -2.15
NEM1YHR004C TY2B-CP25384 1770 aa1.62□□□□□ -2.15
NEM1YHR004C PMD1P32634 1753 aa1.62□□□□□ -2.15
NEM1YHR004C TY2B-DR1Q12472 1770 aa1.62□□□□□ -2.15
NEM1YHR004C SPT6P23615 1451 aaKnown RBP1.62□□□□□ -2.15
NEM1YHR004C RPS30AP0CX33 63 aaKnown RBP1.62□□□□□ -2.15
NEM1YHR004C RPS30BP0CX34 63 aaKnown RBP1.62□□□□□ -2.15
NEM1YHR004C RRP5Q05022 1729 aaKnown RBP1.61□□□□□ -2.15
NEM1YHR004C TY1B-GR3Q12316 1755 aa1.61□□□□□ -2.15
NEM1YHR004C TY1B-ORQ92393 1755 aa1.61□□□□□ -2.15
NEM1YHR004C BPH1P25356 2167 aa1.61□□□□□ -2.15
NEM1YHR004C YLR157W-EP0CF00 54 aa1.61□□□□□ -2.15
NEM1YHR004C YOR011W-AQ3E807 68 aa1.61□□□□□ -2.15
NEM1YHR004C BCK1Q01389 1478 aa1.61□□□□□ -2.15
NEM1YHR004C UTP10P42945 1769 aaKnown RBP1.6□□□□□ -2.15
NEM1YHR004C YCF1P39109 1515 aaKnown RBP1.6□□□□□ -2.15
NEM1YHR004C STT4P37297 1900 aa1.6□□□□□ -2.15
NEM1YHR004C TY1B-DR5P0C2I2 1755 aa1.6□□□□□ -2.15
NEM1YHR004C TY1B-DR6P0C2I3 1755 aa1.6□□□□□ -2.15
NEM1YHR004C TY1B-LR2P0C2I5 1755 aa1.6□□□□□ -2.15
NEM1YHR004C TY1B-PR1P0C2I9 1755 aaKnown RBP1.6□□□□□ -2.15
NEM1YHR004C TY1B-JR1P47098 1755 aa1.6□□□□□ -2.15
NEM1YHR004C TY1B-ML2Q03434 1755 aaKnown RBP1.6□□□□□ -2.15
NEM1YHR004C TY1B-ER1Q03612 1755 aa1.6□□□□□ -2.15
NEM1YHR004C TY1B-ML1Q04711 1755 aaKnown RBP1.6□□□□□ -2.15
NEM1YHR004C TY1B-GR2Q12269 1755 aa1.6□□□□□ -2.15
NEM1YHR004C TY1B-OLQ12273 1755 aa1.6□□□□□ -2.15
NEM1YHR004C TY1B-PLQ12414 1755 aaKnown RBP1.6□□□□□ -2.15
NEM1YHR004C RPL37BP51402 88 aaKnown RBP1.59□□□□□ -2.16
NEM1YHR004C TY3B-GQ99315 1547 aa1.58□□□□□ -2.16
NEM1YHR004C BLM10P43583 2143 aa1.58□□□□□ -2.16
NEM1YHR004C YBL039W-BP0C268 59 aa1.58□□□□□ -2.16
NEM1YHR004C YBR200W-AQ3E755 54 aa1.58□□□□□ -2.16
NEM1YHR004C URA2P07259 2214 aaKnown RBP1.58□□□□□ -2.16
NEM1YHR004C SNQ2P32568 1501 aaKnown RBP1.58□□□□□ -2.16
NEM1YHR004C TY2B-LR1P0C2J3 1770 aa1.57□□□□□ -2.16
NEM1YHR004C TY2B-FP0CX63 1770 aa1.57□□□□□ -2.16
NEM1YHR004C TY2B-GR2P0CX64 1770 aa1.57□□□□□ -2.16
NEM1YHR004C TY2B-DR2Q03494 1770 aa1.57□□□□□ -2.16
NEM1YHR004C TY2B-OR1Q12113 1770 aa1.57□□□□□ -2.16
NEM1YHR004C TY2B-BQ12491 1770 aa1.57□□□□□ -2.16
NEM1YHR004C TY2B-OR2Q12501 1770 aa1.57□□□□□ -2.16
NEM1YHR004C YOL164W-AQ3E7A5 60 aa1.57□□□□□ -2.16
NEM1YHR004C YOL166W-AQ8TGJ1 51 aa1.57□□□□□ -2.16
NEM1YHR004C HIR3P47171 1648 aa1.56□□□□□ -2.16
NEM1YHR004C TY1B-BLQ12490 1755 aa1.56□□□□□ -2.16
NEM1YHR004C DNF2Q12675 1612 aa1.56□□□□□ -2.16
NEM1YHR004C CDC25P04821 1589 aa1.55□□□□□ -2.16
NEM1YHR004C IRC20Q06554 1556 aa1.55□□□□□ -2.16
NEM1YHR004C TY2B-DR3Q07791 1770 aaKnown RBP1.55□□□□□ -2.16
NEM1YHR004C VTH1P40438 1549 aa1.54□□□□□ -2.16
NEM1YHR004C VTH2P40890 1549 aa1.54□□□□□ -2.16
NEM1YHR004C SSK2P53599 1579 aa1.54□□□□□ -2.16
NEM1YHR004C OLI1P61829 76 aa1.54□□□□□ -2.16
NEM1YHR004C YMR001C-AQ8TGS9 76 aa1.54□□□□□ -2.16
NEM1YHR004C RIM15P43565 1770 aa1.53□□□□□ -2.16
NEM1YHR004C ARO1P08566 1588 aaKnown RBP1.53□□□□□ -2.17
NEM1YHR004C APC1P53886 1748 aa1.52□□□□□ -2.17
NEM1YHR004C FKS3Q04952 1785 aa1.52□□□□□ -2.17
NEM1YHR004C YOR394C-AQ8TGJ0 55 aa1.52□□□□□ -2.17
NEM1YHR004C ATG2P53855 1592 aa1.52□□□□□ -2.17
NEM1YHR004C TY1B-JR2P47100 1755 aaKnown RBP1.49□□□□□ -2.17
NEM1YHR004C TY1B-ER2Q03619 1755 aa1.49□□□□□ -2.17
NEM1YHR004C TY1B-MR1Q04214 1755 aa1.49□□□□□ -2.17
NEM1YHR004C TY1B-MR2Q04670 1755 aaKnown RBP1.49□□□□□ -2.17
NEM1YHR004C TY1B-NL1Q12112 1755 aa1.49□□□□□ -2.17
NEM1YHR004C TY1B-GR1Q12141 1755 aa1.49□□□□□ -2.17
NEM1YHR004C RKR1Q04781 1562 aa1.49□□□□□ -2.17
NEM1YHR004C TY1B-LR1Q12088 1755 aaKnown RBP1.49□□□□□ -2.17
NEM1YHR004C YLR157W-DP0CE99 70 aa1.48□□□□□ -2.17
NEM1YHR004C YBR016WP38216 128 aa1.47□□□□□ -2.17
NEM1YHR004C YGR025WP53216 100 aa1.47□□□□□ -2.17
NEM1YHR004C PDR15Q04182 1529 aaKnown RBP1.47□□□□□ -2.17
NEM1YHR004C YBR230W-AQ3E762 66 aa1.47□□□□□ -2.17
NEM1YHR004C YFR009W-AP0C5M9 85 aa1.46□□□□□ -2.18
NEM1YHR004C YOR093CQ12275 1648 aa1.46□□□□□ -2.18
NEM1YHR004C VMR1P38735 1592 aa1.45□□□□□ -2.18
NEM1YHR004C RPO21P04050 1733 aaKnown RBP1.44□□□□□ -2.18
NEM1YHR004C HAP1P0CE41 1502 aa1.44□□□□□ -2.18
NEM1YHR004C SPO14P36126 1683 aa1.44□□□□□ -2.18
NEM1YHR004C RPS27AP35997 82 aaKnown RBP1.43□□□□□ -2.18
NEM1YHR004C YOR192C-CQ3E736 78 aa1.43□□□□□ -2.18
NEM1YHR004C RPS29BP41058 56 aaKnown RBP1.41□□□□□ -2.18
NEM1YHR004C HKR1P41809 1802 aa1.41□□□□□ -2.18
NEM1YHR004C BUD3P25558 1636 aa1.4□□□□□ -2.18
NEM1YHR004C NUP170P38181 1502 aa1.39□□□□□ -2.19
NEM1YHR004C YBL044WP38194 122 aa1.39□□□□□ -2.19
NEM1YHR004C SIP18P50263 79 aa1.38□□□□□ -2.19
NEM1YHR004C STU1P38198 1513 aa1.35□□□□□ -2.19
NEM1YHR004C YBT1P32386 1661 aa1.34□□□□□ -2.19
NEM1YHR004C YOR008C-AQ3E7B9 74 aa1.34□□□□□ -2.2
NEM1YHR004C ULS1Q08562 1619 aa1.34□□□□□ -2.2
NEM1YHR004C SNF2P22082 1703 aa1.31□□□□□ -2.2
NEM1YHR004C NUP188P52593 1655 aaKnown RBP1.3□□□□□ -2.2
NEM1YHR004C RPS27BP38711 82 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms