RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C HUR1P45820 110 aa7.71□□□□□ -1.18
SHU1YHL006C YAL063C-AQ3E791 96 aa7.71□□□□□ -1.18
SHU1YHL006C NHP2P32495 156 aaPredicted RBP7.7□□□□□ -1.18
SHU1YHL006C YLR363W-AQ3E747 85 aa7.69□□□□□ -1.18
SHU1YHL006C YHL018WP38744 120 aaPredicted RBP7.68□□□□□ -1.18
SHU1YHL006C YHL005CP38752 130 aa7.66□□□□□ -1.18
SHU1YHL006C PAI3P01094 68 aa7.65□□□□□ -1.18
SHU1YHL006C LSM6Q06406 86 aaKnown RBP7.65□□□□□ -1.18
SHU1YHL006C POP7P38291 140 aa7.64□□□□□ -1.19
SHU1YHL006C RSM18P40033 138 aa7.64□□□□□ -1.19
SHU1YHL006C OST2P46964 130 aa7.63□□□□□ -1.19
SHU1YHL006C SAE3P89114 91 aa7.62□□□□□ -1.19
SHU1YHL006C YDL085C-AQ3E7B7 68 aaKnown RBP7.62□□□□□ -1.19
SHU1YHL006C DSE2P38844 325 aa7.6□□□□□ -1.19
SHU1YHL006C RPL37BP51402 88 aaKnown RBP7.6□□□□□ -1.19
SHU1YHL006C LSM8P47093 109 aaKnown RBP7.58□□□□□ -1.2
SHU1YHL006C YLR296WQ05898 108 aa7.58□□□□□ -1.2
SHU1YHL006C TDA8Q6B2U8 126 aa7.57□□□□□ -1.2
SHU1YHL006C YAR1P46683 200 aa7.55□□□□□ -1.2
SHU1YHL006C YNL122CP53921 115 aaPredicted RBP7.52□□□□□ -1.21
SHU1YHL006C YJR107C-AP0CT86 78 aa7.5□□□□□ -1.21
SHU1YHL006C CWC27Q02770 301 aa7.5□□□□□ -1.21
SHU1YHL006C TSC3Q3E790 80 aa7.5□□□□□ -1.21
SHU1YHL006C YLR157W-DP0CE99 70 aa7.49□□□□□ -1.21
SHU1YHL006C YEL045CP32616 141 aa7.49□□□□□ -1.21
SHU1YHL006C UIP3P39547 235 aa7.49□□□□□ -1.21
SHU1YHL006C COX7P10174 60 aa7.48□□□□□ -1.21
SHU1YHL006C RSM19P53733 91 aaPredicted RBP7.47□□□□□ -1.21
SHU1YHL006C YOL097W-AQ3E7Y9 61 aa7.47□□□□□ -1.21
SHU1YHL006C YFR009W-AP0C5M9 85 aa7.45□□□□□ -1.22
SHU1YHL006C ATP18P81450 59 aa7.44□□□□□ -1.22
SHU1YHL006C YHR213W-BQ8TGK1 99 aa7.43□□□□□ -1.22
SHU1YHL006C YLR162WQ06235 118 aa7.41□□□□□ -1.22
SHU1YHL006C YIL102C-AQ2V2P5 75 aa7.41□□□□□ -1.22
SHU1YHL006C MIC10Q96VH5 97 aa7.41□□□□□ -1.22
SHU1YHL006C YJL133C-AQ3E7A3 74 aa7.39□□□□□ -1.23
SHU1YHL006C GLC8P41818 229 aa7.38□□□□□ -1.23
SHU1YHL006C ECM19Q06011 112 aa7.37□□□□□ -1.23
SHU1YHL006C ICS3P47034 131 aa7.35□□□□□ -1.23
SHU1YHL006C YNL198CP40166 100 aa7.33□□□□□ -1.24
SHU1YHL006C SHH4Q06236 168 aa7.29□□□□□ -1.24
SHU1YHL006C YCR043CP25361 127 aa7.26□□□□□ -1.25
SHU1YHL006C YKL069WP36088 180 aa7.25□□□□□ -1.25
SHU1YHL006C COX23P38824 151 aa7.25□□□□□ -1.25
SHU1YHL006C YDR381C-AQ3E6R5 114 aa7.24□□□□□ -1.25
SHU1YHL006C YPR170W-BP0C5R9 85 aa7.23□□□□□ -1.25
SHU1YHL006C YOL014WQ08110 124 aa7.22□□□□□ -1.25
SHU1YHL006C EDC1P53080 175 aaPredicted RBP7.2□□□□□ -1.26
SHU1YHL006C COF1Q03048 143 aaKnown RBP7.17□□□□□ -1.26
SHU1YHL006C YBR182C-AQ8TGU6 64 aa7.14□□□□□ -1.27
SHU1YHL006C RPL38P49167 78 aaKnown RBP7.13□□□□□ -1.27
SHU1YHL006C ISD11Q6Q560 94 aa7.13□□□□□ -1.27
SHU1YHL006C YER187WP40102 141 aa7.12□□□□□ -1.27
SHU1YHL006C YHR073W-AP0C5N7 58 aa7.11□□□□□ -1.27
SHU1YHL006C YLR361C-AQ3E795 98 aa7.1□□□□□ -1.27
SHU1YHL006C TDA2P40045 126 aa7.09□□□□□ -1.27
SHU1YHL006C PBI2P0CT04 75 aaKnown RBP7.07□□□□□ -1.28
SHU1YHL006C SOH1P38633 127 aa7.07□□□□□ -1.28
SHU1YHL006C YDL012CQ12489 107 aa7.07□□□□□ -1.28
SHU1YHL006C FYV12Q08559 129 aa7.06□□□□□ -1.28
SHU1YHL006C RPA12P32529 125 aaKnown RBP7.03□□□□□ -1.28
SHU1YHL006C RPL36AP05745 100 aaPredicted RBP7.02□□□□□ -1.29
SHU1YHL006C YHL042WP38729 150 aa7.02□□□□□ -1.29
SHU1YHL006C Q0017Q9ZZX8 53 aa7.01□□□□□ -1.29
SHU1YHL006C YAR064WP39563 99 aa6.99□□□□□ -1.29
SHU1YHL006C YJR128WP47162 119 aa6.98□□□□□ -1.29
SHU1YHL006C YOR304C-AO14468 76 aa6.96□□□□□ -1.3
SHU1YHL006C YCR050CP25630 102 aa6.96□□□□□ -1.3
SHU1YHL006C YGR164WP53291 111 aa6.96□□□□□ -1.3
SHU1YHL006C ATP20Q12233 115 aa6.94□□□□□ -1.3
SHU1YHL006C YOR316C-AQ3E806 69 aa6.94□□□□□ -1.3
SHU1YHL006C RPP2AP05319 106 aaKnown RBP6.9□□□□□ -1.3
SHU1YHL006C RAD6P06104 172 aa6.9□□□□□ -1.3
SHU1YHL006C YPR153WQ06537 140 aa6.9□□□□□ -1.3
SHU1YHL006C SKI6P46948 246 aaPredicted RBP6.89□□□□□ -1.31
SHU1YHL006C TMA7Q3E764 64 aaKnown RBP6.88□□□□□ -1.31
SHU1YHL006C YJL144WP47009 104 aa6.85□□□□□ -1.31
SHU1YHL006C YJL009WP47078 108 aa6.85□□□□□ -1.31
SHU1YHL006C YPL080CQ02826 108 aa6.82□□□□□ -1.32
SHU1YHL006C YDR210WQ03482 75 aa6.82□□□□□ -1.32
SHU1YHL006C YCR085WP25650 117 aa6.81□□□□□ -1.32
SHU1YHL006C LSO2Q3E772 92 aaKnown RBP6.8□□□□□ -1.32
SHU1YHL006C YLR285C-AQ3E771 56 aa6.71□□□□□ -1.34
SHU1YHL006C ATX1P38636 73 aa6.68□□□□□ -1.34
SHU1YHL006C EMC6Q12431 108 aa6.68□□□□□ -1.34
SHU1YHL006C YGL034CP53186 121 aa6.66□□□□□ -1.34
SHU1YHL006C HHF1P02309 103 aaKnown RBP6.65□□□□□ -1.34
SHU1YHL006C LIP1Q03579 150 aa6.65□□□□□ -1.34
SHU1YHL006C INO4P13902 151 aa6.64□□□□□ -1.35
SHU1YHL006C YGR039WP53225 103 aa6.6□□□□□ -1.35
SHU1YHL006C YSY6P38374 65 aa6.58□□□□□ -1.36
SHU1YHL006C YOL013W-AP0C272 63 aaPredicted RBP6.55□□□□□ -1.36
SHU1YHL006C YBR016WP38216 128 aa6.53□□□□□ -1.36
SHU1YHL006C YBL008W-AQ3E821 79 aa6.51□□□□□ -1.37
SHU1YHL006C YKL183C-AQ3E765 70 aa6.5□□□□□ -1.37
SHU1YHL006C YFL041W-AQ3E817 63 aa6.5□□□□□ -1.37
SHU1YHL006C YGR146C-AQ8TGT9 53 aa6.5□□□□□ -1.37
SHU1YHL006C YLR255CO13574 117 aa6.48□□□□□ -1.37
SHU1YHL006C YIL102CP40488 101 aa6.47□□□□□ -1.37
SHU1YHL006C COX8P04039 78 aa6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms