RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W YPR145C-AQ2V2P0 78 aa2.54□□□□□ -2
DEG1YFL001W DCV1P43595 202 aa2.53□□□□□ -2
DEG1YFL001W VPS55P47111 140 aa2.53□□□□□ -2
DEG1YFL001W BRP1P53194 125 aa2.53□□□□□ -2
DEG1YFL001W YIL014C-AQ02598 104 aa2.53□□□□□ -2
DEG1YFL001W HOR7Q05827 59 aa2.53□□□□□ -2
DEG1YFL001W RPL36BO14455 100 aaKnown RBP2.52□□□□□ -2.01
DEG1YFL001W RPL36AP05745 100 aaPredicted RBP2.52□□□□□ -2.01
DEG1YFL001W YJL197C-AP0C5P0 93 aa2.52□□□□□ -2.01
DEG1YFL001W PAU19P0CE85 124 aa2.52□□□□□ -2.01
DEG1YFL001W PAU3P25610 124 aa2.52□□□□□ -2.01
DEG1YFL001W PAU4P53427 120 aa2.52□□□□□ -2.01
DEG1YFL001W YGR035W-AQ45U48 73 aa2.52□□□□□ -2.01
DEG1YFL001W AQY2P0CD90 149 aa2.51□□□□□ -2.01
DEG1YFL001W POR2P40478 281 aa2.51□□□□□ -2.01
DEG1YFL001W IMP2P46972 177 aa2.51□□□□□ -2.01
DEG1YFL001W YMR007WQ03675 126 aa2.51□□□□□ -2.01
DEG1YFL001W YKL065W-AQ2V2P2 73 aa2.51□□□□□ -2.01
DEG1YFL001W YKL023C-AQ2V2P3 75 aa2.51□□□□□ -2.01
DEG1YFL001W COX19Q3E731 98 aa2.51□□□□□ -2.01
DEG1YFL001W PAU1P0CE88 120 aa2.5□□□□□ -2.01
DEG1YFL001W PAU14P0CE89 120 aa2.5□□□□□ -2.01
DEG1YFL001W PAU6P0CE90 120 aa2.5□□□□□ -2.01
DEG1YFL001W PAU18P0CE91 120 aa2.5□□□□□ -2.01
DEG1YFL001W PAU8P0CE92 120 aa2.5□□□□□ -2.01
DEG1YFL001W PAU11P0CE93 120 aa2.5□□□□□ -2.01
DEG1YFL001W PAU16P35994 123 aa2.5□□□□□ -2.01
DEG1YFL001W PAU13P38725 120 aa2.5□□□□□ -2.01
DEG1YFL001W PAU10Q03050 120 aa2.5□□□□□ -2.01
DEG1YFL001W PAU20Q08322 120 aa2.5□□□□□ -2.01
DEG1YFL001W PAU9Q3E770 120 aa2.5□□□□□ -2.01
DEG1YFL001W LSM6Q06406 86 aaKnown RBP2.49□□□□□ -2.01
DEG1YFL001W HPA2Q06592 156 aa2.49□□□□□ -2.01
DEG1YFL001W RTC6O14464 93 aa2.48□□□□□ -2.01
DEG1YFL001W RPS22AP0C0W1 130 aaKnown RBP2.48□□□□□ -2.01
DEG1YFL001W YHR173CP38864 112 aa2.48□□□□□ -2.01
DEG1YFL001W YOR314WQ12506 109 aa2.48□□□□□ -2.01
DEG1YFL001W YHR212W-AP0CX91 67 aa2.47□□□□□ -2.01
DEG1YFL001W YAL065CO13511 128 aa2.46□□□□□ -2.02
DEG1YFL001W YBR027CP38220 110 aa2.46□□□□□ -2.02
DEG1YFL001W MRPL31P14063 131 aaPredicted RBP2.45□□□□□ -2.02
DEG1YFL001W MPC2P38857 129 aa2.45□□□□□ -2.02
DEG1YFL001W YIL163CP40448 117 aa2.45□□□□□ -2.02
DEG1YFL001W PAU5P43575 122 aa2.45□□□□□ -2.02
DEG1YFL001W YSY6P38374 65 aa2.44□□□□□ -2.02
DEG1YFL001W COX23P38824 151 aa2.44□□□□□ -2.02
DEG1YFL001W TOM7P53507 60 aa2.44□□□□□ -2.02
DEG1YFL001W SNA2P56508 79 aa2.44□□□□□ -2.02
DEG1YFL001W YLR194CQ05777 254 aa2.44□□□□□ -2.02
DEG1YFL001W YOR011W-AQ3E807 68 aa2.44□□□□□ -2.02
DEG1YFL001W PFY1P07274 126 aa2.43□□□□□ -2.02
DEG1YFL001W SPI1P40092 148 aa2.43□□□□□ -2.02
DEG1YFL001W VAM10Q08474 114 aa2.43□□□□□ -2.02
DEG1YFL001W YCR095W-AQ3E787 52 aa2.43□□□□□ -2.02
DEG1YFL001W YLR342W-AQ3E810 57 aa2.43□□□□□ -2.02
DEG1YFL001W HUA1P40325 198 aa2.42□□□□□ -2.02
DEG1YFL001W AIM19P40502 157 aa2.42□□□□□ -2.02
DEG1YFL001W IRC21Q04772 201 aa2.42□□□□□ -2.02
DEG1YFL001W CCW12Q12127 133 aa2.42□□□□□ -2.02
DEG1YFL001W YER188C-AP0C0V2 99 aa2.42□□□□□ -2.02
DEG1YFL001W YMR141CP40211 102 aa2.42□□□□□ -2.02
DEG1YFL001W RPS22BQ3E7Y3 130 aaKnown RBP2.42□□□□□ -2.02
DEG1YFL001W HMRA2P0CY13 119 aa2.41□□□□□ -2.02
DEG1YFL001W PAU7P39545 55 aa2.41□□□□□ -2.02
DEG1YFL001W YGR025WP53216 100 aa2.41□□□□□ -2.02
DEG1YFL001W MRX7P53869 86 aa2.41□□□□□ -2.02
DEG1YFL001W YGR121W-AQ3E816 71 aa2.41□□□□□ -2.02
DEG1YFL001W RPS11AP0CX47 156 aaKnown RBP2.4□□□□□ -2.03
DEG1YFL001W RPS11BP0CX48 156 aaKnown RBP2.4□□□□□ -2.03
DEG1YFL001W RPL33AP05744 107 aaKnown RBP2.39□□□□□ -2.03
DEG1YFL001W YGL014C-AP0C5N1 53 aa2.39□□□□□ -2.03
DEG1YFL001W AIM4P38305 123 aaPredicted RBP2.39□□□□□ -2.03
DEG1YFL001W BSC4P53841 131 aa2.39□□□□□ -2.03
DEG1YFL001W SPC1P46965 94 aa2.38□□□□□ -2.03
DEG1YFL001W YMR122CQ03879 124 aa2.38□□□□□ -2.03
DEG1YFL001W SGF11Q03067 99 aa2.37□□□□□ -2.03
DEG1YFL001W YBR200W-AQ3E755 54 aa2.37□□□□□ -2.03
DEG1YFL001W DYN1P36022 4092 aa2.36□□□□□ -2.03
DEG1YFL001W YCR001WP25347 104 aa2.35□□□□□ -2.03
DEG1YFL001W ERI1P62651 68 aaKnown RBP2.35□□□□□ -2.03
DEG1YFL001W YGL041C-BQ3E750 60 aa2.35□□□□□ -2.03
DEG1YFL001W YLR285C-AQ3E771 56 aa2.35□□□□□ -2.03
DEG1YFL001W YGR240C-AQ3E786 66 aa2.35□□□□□ -2.03
DEG1YFL001W YDR182W-AQ3E796 67 aa2.35□□□□□ -2.03
DEG1YFL001W AUA1P32450 94 aa2.34□□□□□ -2.04
DEG1YFL001W PMP3P87284 55 aa2.34□□□□□ -2.04
DEG1YFL001W YDR010CQ12426 110 aa2.33□□□□□ -2.04
DEG1YFL001W YDR246W-AQ3E763 66 aa2.33□□□□□ -2.04
DEG1YFL001W MGR2Q02889 113 aa2.31□□□□□ -2.04
DEG1YFL001W YOR008C-AQ3E7B9 74 aa2.31□□□□□ -2.04
DEG1YFL001W YPR010C-AA5Z2X5 72 aa2.3□□□□□ -2.04
DEG1YFL001W TOS6P48560 102 aa2.3□□□□□ -2.04
DEG1YFL001W YMR122W-AQ3E842 84 aa2.3□□□□□ -2.04
DEG1YFL001W HUB1Q6Q546 73 aa2.3□□□□□ -2.04
DEG1YFL001W NOP10Q6Q547 58 aaPredicted RBP2.3□□□□□ -2.04
DEG1YFL001W YAR064WP39563 99 aa2.29□□□□□ -2.04
DEG1YFL001W YIL156W-BQ2V2P4 73 aa2.28□□□□□ -2.04
DEG1YFL001W LCL2Q08045 131 aa2.27□□□□□ -2.05
DEG1YFL001W YDR210WQ03482 75 aa2.26□□□□□ -2.05
DEG1YFL001W YNL122CP53921 115 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms