RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W RPC10P40422 70 aa1.83□□□□□ -2.12
UBC6YER100W YOR105WQ08504 108 aa1.82□□□□□ -2.12
UBC6YER100W POC4Q12245 148 aaPredicted RBP1.82□□□□□ -2.12
UBC6YER100W SPO14P36126 1683 aa1.82□□□□□ -2.12
UBC6YER100W IML1P47170 1584 aa1.81□□□□□ -2.12
UBC6YER100W CHC1P22137 1653 aaKnown RBP1.81□□□□□ -2.12
UBC6YER100W YAL065CO13511 128 aa1.81□□□□□ -2.12
UBC6YER100W VMR1P38735 1592 aa1.81□□□□□ -2.12
UBC6YER100W COX7P10174 60 aa1.8□□□□□ -2.12
UBC6YER100W RPL38P49167 78 aaKnown RBP1.8□□□□□ -2.12
UBC6YER100W POL2P21951 2222 aaKnown RBP1.8□□□□□ -2.12
UBC6YER100W YPR145C-AQ2V2P0 78 aa1.79□□□□□ -2.12
UBC6YER100W YMR122W-AQ3E842 84 aa1.79□□□□□ -2.12
UBC6YER100W DNF2Q12675 1612 aa1.79□□□□□ -2.12
UBC6YER100W SNF2P22082 1703 aa1.79□□□□□ -2.12
UBC6YER100W MLP1Q02455 1875 aaKnown RBP1.78□□□□□ -2.12
UBC6YER100W NUP188P52593 1655 aaKnown RBP1.78□□□□□ -2.12
UBC6YER100W YJR107C-AP0CT86 78 aa1.78□□□□□ -2.12
UBC6YER100W TOM6P33448 61 aa1.78□□□□□ -2.12
UBC6YER100W DOP1Q03921 1698 aa1.77□□□□□ -2.13
UBC6YER100W BCK1Q01389 1478 aa1.77□□□□□ -2.13
UBC6YER100W NOP10Q6Q547 58 aaPredicted RBP1.76□□□□□ -2.13
UBC6YER100W NUP192P47054 1683 aa1.76□□□□□ -2.13
UBC6YER100W HAP1P0CE41 1502 aa1.76□□□□□ -2.13
UBC6YER100W YNL198CP40166 100 aa1.75□□□□□ -2.13
UBC6YER100W ATP18P81450 59 aa1.75□□□□□ -2.13
UBC6YER100W DNF3Q12674 1656 aa1.74□□□□□ -2.13
UBC6YER100W YNL190WP53872 204 aa1.73□□□□□ -2.13
UBC6YER100W YKL065W-AQ2V2P2 73 aa1.72□□□□□ -2.13
UBC6YER100W YIL156W-BQ2V2P4 73 aa1.72□□□□□ -2.13
UBC6YER100W YDR381C-AQ3E6R5 114 aa1.72□□□□□ -2.13
UBC6YER100W USO1P25386 1790 aa1.72□□□□□ -2.13
UBC6YER100W YOR314WQ12506 109 aa1.7□□□□□ -2.14
UBC6YER100W SDH6Q3E785 79 aa1.7□□□□□ -2.14
UBC6YER100W YRF1-2P40105 1681 aa1.7□□□□□ -2.14
UBC6YER100W RIM15P43565 1770 aa1.69□□□□□ -2.14
UBC6YER100W LSM2P38203 95 aaKnown RBP1.68□□□□□ -2.14
UBC6YER100W SGF11Q03067 99 aa1.68□□□□□ -2.14
UBC6YER100W APC1P53886 1748 aa1.68□□□□□ -2.14
UBC6YER100W TY1B-NL2Q99337 1749 aaKnown RBP1.66□□□□□ -2.14
UBC6YER100W FKS3Q04952 1785 aa1.64□□□□□ -2.15
UBC6YER100W RRP5Q05022 1729 aaKnown RBP1.64□□□□□ -2.15
UBC6YER100W YHR213W-AQ8TGT4 77 aa1.64□□□□□ -2.15
UBC6YER100W SWM2P40342 146 aa1.63□□□□□ -2.15
UBC6YER100W RPS29BP41058 56 aaKnown RBP1.62□□□□□ -2.15
UBC6YER100W YOL097W-AQ3E7Y9 61 aa1.62□□□□□ -2.15
UBC6YER100W BLM10P43583 2143 aa1.61□□□□□ -2.15
UBC6YER100W QCR9P22289 66 aa1.6□□□□□ -2.15
UBC6YER100W YPR108W-AQ3E7B3 70 aa1.6□□□□□ -2.15
UBC6YER100W YIL134C-AQ45U18 67 aa1.6□□□□□ -2.15
UBC6YER100W PRP8P33334 2413 aaKnown RBP1.59□□□□□ -2.16
UBC6YER100W UTP10P42945 1769 aaKnown RBP1.59□□□□□ -2.16
UBC6YER100W ECM29P38737 1868 aa1.58□□□□□ -2.16
UBC6YER100W YDR119W-AQ2V2P9 66 aa1.58□□□□□ -2.16
UBC6YER100W YFR009W-AP0C5M9 85 aa1.57□□□□□ -2.16
UBC6YER100W SMX2P40204 77 aaKnown RBP1.57□□□□□ -2.16
UBC6YER100W FAS2P19097 1887 aaKnown RBP1.56□□□□□ -2.16
UBC6YER100W YGR121W-AQ3E816 71 aa1.55□□□□□ -2.16
UBC6YER100W YDL022C-AP0C5L6 82 aa1.53□□□□□ -2.16
UBC6YER100W FIG2P25653 1609 aa1.53□□□□□ -2.16
UBC6YER100W YBR032WP38223 100 aa1.53□□□□□ -2.16
UBC6YER100W ATX1P38636 73 aa1.53□□□□□ -2.16
UBC6YER100W FLO1P32768 1537 aa1.52□□□□□ -2.17
UBC6YER100W TIM12P32830 109 aa1.52□□□□□ -2.17
UBC6YER100W PAI3P01094 68 aa1.51□□□□□ -2.17
UBC6YER100W YBR016WP38216 128 aa1.5□□□□□ -2.17
UBC6YER100W MOT1P32333 1867 aa1.5□□□□□ -2.17
UBC6YER100W PMD1P32634 1753 aa1.49□□□□□ -2.17
UBC6YER100W HKR1P41809 1802 aa1.49□□□□□ -2.17
UBC6YER100W YGR035W-AQ45U48 73 aa1.47□□□□□ -2.17
UBC6YER100W STT4P37297 1900 aa1.45□□□□□ -2.18
UBC6YER100W PAU7P39545 55 aa1.45□□□□□ -2.18
UBC6YER100W EDC1P53080 175 aaPredicted RBP1.45□□□□□ -2.18
UBC6YER100W ATP17Q06405 101 aa1.45□□□□□ -2.18
UBC6YER100W YOL131WQ08270 108 aa1.45□□□□□ -2.18
UBC6YER100W YKL018C-AQ3E7A7 99 aa1.43□□□□□ -2.18
UBC6YER100W YLR146W-AQ2V2P1 62 aa1.41□□□□□ -2.18
UBC6YER100W YOR032W-AQ8TGS1 66 aa1.41□□□□□ -2.18
UBC6YER100W YFL041W-AQ3E817 63 aa1.39□□□□□ -2.19
UBC6YER100W YDR524C-BQ3E6R4 66 aa1.38□□□□□ -2.19
UBC6YER100W COX9P07255 59 aa1.37□□□□□ -2.19
UBC6YER100W SSS1P35179 80 aa1.37□□□□□ -2.19
UBC6YER100W VMA9Q3E7B6 73 aa1.36□□□□□ -2.19
UBC6YER100W YFR010W-AP0C5N0 62 aa1.34□□□□□ -2.19
UBC6YER100W NCE101Q02820 53 aa1.33□□□□□ -2.2
UBC6YER100W ERI1P62651 68 aaKnown RBP1.32□□□□□ -2.2
UBC6YER100W SPI1P40092 148 aa1.31□□□□□ -2.2
UBC6YER100W RPS27AP35997 82 aaKnown RBP1.29□□□□□ -2.2
UBC6YER100W RPS27BP38711 82 aa1.29□□□□□ -2.2
UBC6YER100W COA2Q3E823 68 aa1.29□□□□□ -2.2
UBC6YER100W BPH1P25356 2167 aa1.28□□□□□ -2.2
UBC6YER100W TAO3P40468 2376 aa1.28□□□□□ -2.2
UBC6YER100W YGR025WP53216 100 aa1.27□□□□□ -2.21
UBC6YER100W YGL258W-AQ3E740 77 aa1.27□□□□□ -2.21
UBC6YER100W HUB1Q6Q546 73 aa1.27□□□□□ -2.21
UBC6YER100W YOR192C-CQ3E736 78 aa1.26□□□□□ -2.21
UBC6YER100W OLI1P61829 76 aa1.25□□□□□ -2.21
UBC6YER100W SIP18P50263 79 aa1.24□□□□□ -2.21
UBC6YER100W TOM7P53507 60 aa1.24□□□□□ -2.21
UBC6YER100W YBR200W-AQ3E755 54 aa1.24□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms