RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeastyeast

Gene UBC8, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC8YEL012W YFL065CP43539 102 aa2.35□□□□□ -2.03
UBC8YEL012W RPL37BP51402 88 aaKnown RBP2.35□□□□□ -2.03
UBC8YEL012W CUE4Q04201 117 aaPredicted RBP2.35□□□□□ -2.03
UBC8YEL012W YPR203WQ08994 102 aa2.35□□□□□ -2.03
UBC8YEL012W COA6Q3E846 104 aa2.35□□□□□ -2.03
UBC8YEL012W YIL134C-AQ45U18 67 aa2.35□□□□□ -2.03
UBC8YEL012W YDL022C-AP0C5L6 82 aa2.34□□□□□ -2.03
UBC8YEL012W RGM1Q00453 211 aa2.34□□□□□ -2.03
UBC8YEL012W KSH1Q8TGJ3 72 aa2.34□□□□□ -2.03
UBC8YEL012W MRPL11P36521 249 aaPredicted RBP2.33□□□□□ -2.04
UBC8YEL012W ATG8P38182 117 aaRIP-Chip data2.33□□□□□ -2.04not detected
UBC8YEL012W YER181CP40097 107 aa2.33□□□□□ -2.04
UBC8YEL012W SPG1P50088 95 aa2.33□□□□□ -2.04
UBC8YEL012W YGR164WP53291 111 aa2.33□□□□□ -2.04
UBC8YEL012W EMC6Q12431 108 aa2.33□□□□□ -2.04
UBC8YEL012W YKL023C-AQ2V2P3 75 aa2.33□□□□□ -2.04
UBC8YEL012W TSC3Q3E790 80 aa2.33□□□□□ -2.04
UBC8YEL012W RPS22BQ3E7Y3 130 aaKnown RBP2.33□□□□□ -2.04
UBC8YEL012W YLL006W-AQ3E814 58 aa2.33□□□□□ -2.04
UBC8YEL012W YER134CP40081 178 aa2.32□□□□□ -2.04
UBC8YEL012W DDR2P89113 61 aa2.32□□□□□ -2.04
UBC8YEL012W CYT2Q00873 224 aa2.32□□□□□ -2.04
UBC8YEL012W MBF1O14467 151 aaKnown RBP2.31□□□□□ -2.04
UBC8YEL012W PAU23Q07987 124 aa2.31□□□□□ -2.04
UBC8YEL012W NAT5Q08689 176 aa2.31□□□□□ -2.04
UBC8YEL012W PAU17Q12370 124 aa2.31□□□□□ -2.04
UBC8YEL012W MSL1P40567 111 aaPredicted RBP2.3□□□□□ -2.04
UBC8YEL012W YNL190WP53872 204 aa2.3□□□□□ -2.04
UBC8YEL012W YML079WQ03629 201 aa2.3□□□□□ -2.04
UBC8YEL012W YGR121W-AQ3E816 71 aa2.3□□□□□ -2.04
UBC8YEL012W TDA8Q6B2U8 126 aa2.3□□□□□ -2.04
UBC8YEL012W YBR027CP38220 110 aa2.29□□□□□ -2.04
UBC8YEL012W FYV4P38783 130 aaPredicted RBP2.29□□□□□ -2.04
UBC8YEL012W MRPS12P53732 153 aa2.29□□□□□ -2.04
UBC8YEL012W POP3P53833 195 aaPredicted RBP2.29□□□□□ -2.04
UBC8YEL012W YCR050CP25630 102 aa2.28□□□□□ -2.04
UBC8YEL012W YCR085WP25650 117 aa2.28□□□□□ -2.04
UBC8YEL012W ATX1P38636 73 aa2.28□□□□□ -2.04
UBC8YEL012W YNL198CP40166 100 aa2.28□□□□□ -2.04
UBC8YEL012W BSC4P53841 131 aa2.28□□□□□ -2.04
UBC8YEL012W YOR376W-AQ3E805 51 aa2.28□□□□□ -2.04
UBC8YEL012W RPL29P05747 59 aaPredicted RBP2.27□□□□□ -2.05
UBC8YEL012W HPA2Q06592 156 aa2.27□□□□□ -2.05
UBC8YEL012W YNL042W-BQ3E7Z2 85 aa2.27□□□□□ -2.05
UBC8YEL012W YEL067CP39978 195 aa2.26□□□□□ -2.05
UBC8YEL012W SKI6P46948 246 aaPredicted RBP2.26□□□□□ -2.05
UBC8YEL012W YHR007C-AQ07074 71 aa2.26□□□□□ -2.05
UBC8YEL012W YPL261CQ08976 102 aa2.26□□□□□ -2.05
UBC8YEL012W YBR230W-AQ3E762 66 aa2.26□□□□□ -2.05
UBC8YEL012W MIC10Q96VH5 97 aa2.26□□□□□ -2.05
UBC8YEL012W RPA12P32529 125 aaKnown RBP2.25□□□□□ -2.05
UBC8YEL012W YHL018WP38744 120 aaPredicted RBP2.25□□□□□ -2.05
UBC8YEL012W YDR119W-AQ2V2P9 66 aa2.25□□□□□ -2.05
UBC8YEL012W QCR8P08525 94 aa2.24□□□□□ -2.05
UBC8YEL012W YDL157CQ12082 118 aa2.24□□□□□ -2.05
UBC8YEL012W YJL127C-BQ3E828 52 aa2.24□□□□□ -2.05
UBC8YEL012W YFR032C-BQ8TGU2 87 aa2.24□□□□□ -2.05
UBC8YEL012W TOM6P33448 61 aa2.22□□□□□ -2.05
UBC8YEL012W TDA2P40045 126 aa2.22□□□□□ -2.05
UBC8YEL012W YOL014WQ08110 124 aa2.22□□□□□ -2.05
UBC8YEL012W SCS22Q6Q595 175 aa2.22□□□□□ -2.05
UBC8YEL012W BET1P22804 142 aa2.21□□□□□ -2.06
UBC8YEL012W YHL005CP38752 130 aa2.21□□□□□ -2.06
UBC8YEL012W RSM19P53733 91 aaPredicted RBP2.21□□□□□ -2.06
UBC8YEL012W YNR077CP53758 84 aa2.21□□□□□ -2.06
UBC8YEL012W YNL122CP53921 115 aaPredicted RBP2.21□□□□□ -2.06
UBC8YEL012W IRC21Q04772 201 aa2.21□□□□□ -2.06
UBC8YEL012W YLR296WQ05898 108 aa2.21□□□□□ -2.06
UBC8YEL012W YOR072WQ08486 104 aa2.21□□□□□ -2.06
UBC8YEL012W YIL102C-AQ2V2P5 75 aa2.21□□□□□ -2.06
UBC8YEL012W YHR086W-AQ3E746 53 aa2.21□□□□□ -2.06
UBC8YEL012W YLR363W-AQ3E747 85 aa2.21□□□□□ -2.06
UBC8YEL012W YML100W-AQ8TGT0 57 aa2.21□□□□□ -2.06
UBC8YEL012W YOR034C-AQ3E735 80 aa2.2□□□□□ -2.06
UBC8YEL012W YFL041W-AQ3E817 63 aa2.2□□□□□ -2.06
UBC8YEL012W FYV5P25585 152 aa2.19□□□□□ -2.06
UBC8YEL012W YKL044WP36092 106 aa2.19□□□□□ -2.06
UBC8YEL012W YHL042WP38729 150 aa2.19□□□□□ -2.06
UBC8YEL012W NHP2P32495 156 aaPredicted RBP2.18□□□□□ -2.06
UBC8YEL012W ICY1Q04329 127 aa2.18□□□□□ -2.06
UBC8YEL012W FYV12Q08559 129 aa2.18□□□□□ -2.06
UBC8YEL012W HUR1P45820 110 aa2.17□□□□□ -2.06
UBC8YEL012W YDR381C-AQ3E6R5 114 aa2.17□□□□□ -2.06
UBC8YEL012W YPL038W-AQ3E7B4 63 aa2.17□□□□□ -2.06
UBC8YEL012W YLR236CA0A023PZG4 107 aa2.16□□□□□ -2.06
UBC8YEL012W RPL36BO14455 100 aaKnown RBP2.16□□□□□ -2.06
UBC8YEL012W RSM18P40033 138 aa2.15□□□□□ -2.07
UBC8YEL012W YER187WP40102 141 aa2.15□□□□□ -2.07
UBC8YEL012W ICS3P47034 131 aa2.15□□□□□ -2.07
UBC8YEL012W ATP20Q12233 115 aa2.15□□□□□ -2.07
UBC8YEL012W SEC11P15367 167 aa2.14□□□□□ -2.07
UBC8YEL012W QCR10P37299 77 aa2.14□□□□□ -2.07
UBC8YEL012W LIP1Q03579 150 aa2.14□□□□□ -2.07
UBC8YEL012W COX7P10174 60 aa2.13□□□□□ -2.07
UBC8YEL012W DSE2P38844 325 aa2.13□□□□□ -2.07
UBC8YEL012W MPC3P53311 146 aa2.13□□□□□ -2.07
UBC8YEL012W SOM1Q05676 74 aa2.13□□□□□ -2.07
UBC8YEL012W LSM6Q06406 86 aaKnown RBP2.13□□□□□ -2.07
UBC8YEL012W YOR381W-AQ3E804 55 aa2.1□□□□□ -2.07
UBC8YEL012W OST5Q92316 86 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms