RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeastyeast

Gene TFB3, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB3YDR460W RPS27BP38711 82 aa3.41□□□□□ -1.86
TFB3YDR460W YNL208WP40159 199 aaKnown RBP3.41□□□□□ -1.86
TFB3YDR460W MRPS8Q03799 155 aa3.41□□□□□ -1.86
TFB3YDR460W YOL160WQ08321 113 aa3.41□□□□□ -1.86
TFB3YDR460W YOL166W-AQ8TGJ1 51 aa3.41□□□□□ -1.86
TFB3YDR460W RPL15AP05748 204 aaKnown RBP3.4□□□□□ -1.87
TFB3YDR460W YBL081WP38180 368 aaKnown RBP3.4□□□□□ -1.87
TFB3YDR460W CCW12Q12127 133 aa3.4□□□□□ -1.87
TFB3YDR460W RPS30AP0CX33 63 aaKnown RBP3.39□□□□□ -1.87
TFB3YDR460W RPS30BP0CX34 63 aaKnown RBP3.39□□□□□ -1.87
TFB3YDR460W FYV5P25585 152 aa3.39□□□□□ -1.87
TFB3YDR460W COX14P39103 70 aa3.39□□□□□ -1.87
TFB3YDR460W YAL064WP39711 94 aa3.39□□□□□ -1.87
TFB3YDR460W YER135CP40082 130 aa3.39□□□□□ -1.87
TFB3YDR460W YJL027CP47063 138 aaPredicted RBP3.39□□□□□ -1.87
TFB3YDR460W RPL38P49167 78 aaKnown RBP3.39□□□□□ -1.87
TFB3YDR460W SED1Q01589 338 aa3.39□□□□□ -1.87
TFB3YDR460W YPR153WQ06537 140 aa3.39□□□□□ -1.87
TFB3YDR460W YBR200W-AQ3E755 54 aa3.39□□□□□ -1.87
TFB3YDR460W YOR376W-AQ3E805 51 aa3.39□□□□□ -1.87
TFB3YDR460W DDR48P18899 430 aaKnown RBP3.38□□□□□ -1.87
TFB3YDR460W KRE9P39005 276 aa3.38□□□□□ -1.87
TFB3YDR460W YEL008WP40001 126 aa3.38□□□□□ -1.87
TFB3YDR460W SPC1P46965 94 aa3.38□□□□□ -1.87
TFB3YDR460W NCE102Q12207 173 aaRIP-Chip data3.38□□□□□ -1.87not detected
TFB3YDR460W FAS1P07149 2051 aaKnown RBP3.38□□□□□ -1.87
TFB3YDR460W RPL29P05747 59 aaPredicted RBP3.37□□□□□ -1.87
TFB3YDR460W YCR001WP25347 104 aa3.37□□□□□ -1.87
TFB3YDR460W YDR114CQ04597 100 aa3.37□□□□□ -1.87
TFB3YDR460W YCR095W-AQ3E787 52 aa3.37□□□□□ -1.87
TFB3YDR460W YLR307C-AQ3E825 87 aa3.37□□□□□ -1.87
TFB3YDR460W COX23P38824 151 aa3.36□□□□□ -1.87
TFB3YDR460W YIL086CP40503 102 aa3.36□□□□□ -1.87
TFB3YDR460W BLM10P43583 2143 aa3.35□□□□□ -1.87
TFB3YDR460W YFR009W-AP0C5M9 85 aa3.35□□□□□ -1.87
TFB3YDR460W QCR10P37299 77 aa3.35□□□□□ -1.87
TFB3YDR460W YER084WP40057 128 aa3.35□□□□□ -1.87
TFB3YDR460W SIP18P50263 79 aa3.35□□□□□ -1.87
TFB3YDR460W PMP3P87284 55 aa3.35□□□□□ -1.87
TFB3YDR460W YDL241WQ07738 123 aa3.35□□□□□ -1.87
TFB3YDR460W EDC2P40023 145 aaPredicted RBP3.34□□□□□ -1.87
TFB3YDR460W EDC1P53080 175 aaPredicted RBP3.34□□□□□ -1.87
TFB3YDR460W YGL149WP53116 101 aa3.34□□□□□ -1.87
TFB3YDR460W SNA2P56508 79 aa3.34□□□□□ -1.87
TFB3YDR460W LIP1Q03579 150 aa3.34□□□□□ -1.87
TFB3YDR460W SDH6Q3E785 79 aa3.34□□□□□ -1.87
TFB3YDR460W YLL006W-AQ3E814 58 aa3.34□□□□□ -1.87
TFB3YDR460W MRPL38P35996 138 aaPredicted RBP3.32□□□□□ -1.88
TFB3YDR460W BSC4P53841 131 aa3.32□□□□□ -1.88
TFB3YDR460W VAM10Q08474 114 aa3.32□□□□□ -1.88
TFB3YDR460W YNL146C-AQ3E7Z1 64 aa3.32□□□□□ -1.88
TFB3YDR460W YPR010C-AA5Z2X5 72 aa3.31□□□□□ -1.88
TFB3YDR460W YBR219CP38317 127 aa3.31□□□□□ -1.88
TFB3YDR460W MRX7P53869 86 aa3.31□□□□□ -1.88
TFB3YDR460W ATP17Q06405 101 aa3.31□□□□□ -1.88
TFB3YDR460W YCL048W-AQ2V2Q2 79 aa3.31□□□□□ -1.88
TFB3YDR460W YMR001C-AQ8TGS9 76 aa3.31□□□□□ -1.88
TFB3YDR460W YIL102CP40488 101 aa3.3□□□□□ -1.88
TFB3YDR460W YOR034C-AQ3E735 80 aa3.3□□□□□ -1.88
TFB3YDR460W DYN1P36022 4092 aa3.29□□□□□ -1.88
TFB3YDR460W YLR157W-DP0CE99 70 aa3.29□□□□□ -1.88
TFB3YDR460W SOM1Q05676 74 aa3.29□□□□□ -1.88
TFB3YDR460W ECM19Q06011 112 aa3.29□□□□□ -1.88
TFB3YDR460W YOL014WQ08110 124 aa3.29□□□□□ -1.88
TFB3YDR460W YMR122W-AQ3E842 84 aa3.29□□□□□ -1.88
TFB3YDR460W RPS11AP0CX47 156 aaKnown RBP3.28□□□□□ -1.88
TFB3YDR460W RPS11BP0CX48 156 aaKnown RBP3.28□□□□□ -1.88
TFB3YDR460W HOR7Q05827 59 aa3.28□□□□□ -1.88
TFB3YDR460W YMR105W-AQ8TGS8 64 aa3.28□□□□□ -1.88
TFB3YDR460W MDN1Q12019 4910 aaKnown RBP3.28□□□□□ -1.88
TFB3YDR460W YOL013W-AP0C272 63 aaPredicted RBP3.27□□□□□ -1.89
TFB3YDR460W YBL008W-AQ3E821 79 aa3.27□□□□□ -1.89
TFB3YDR460W YJL197C-AP0C5P0 93 aa3.26□□□□□ -1.89
TFB3YDR460W YHR125WP38831 101 aa3.26□□□□□ -1.89
TFB3YDR460W YPR013CQ12145 317 aa3.26□□□□□ -1.89
TFB3YDR460W YDR010CQ12426 110 aa3.26□□□□□ -1.89
TFB3YDR460W YNL042W-BQ3E7Z2 85 aa3.26□□□□□ -1.89
TFB3YDR460W YHR213W-BQ8TGK1 99 aa3.26□□□□□ -1.89
TFB3YDR460W YFR032C-BQ8TGU2 87 aa3.26□□□□□ -1.89
TFB3YDR460W YAR023CD6VPM8 179 aa3.25□□□□□ -1.89
TFB3YDR460W YNL122CP53921 115 aaPredicted RBP3.25□□□□□ -1.89
TFB3YDR460W YBL039W-BP0C268 59 aa3.24□□□□□ -1.89
TFB3YDR460W YBR027CP38220 110 aa3.24□□□□□ -1.89
TFB3YDR460W MVB12P42939 101 aa3.24□□□□□ -1.89
TFB3YDR460W YJL133C-AQ3E7A3 74 aa3.24□□□□□ -1.89
TFB3YDR460W YOL097W-AQ3E7Y9 61 aa3.24□□□□□ -1.89
TFB3YDR460W AQY2P0CD90 149 aa3.22□□□□□ -1.89
TFB3YDR460W WWM1P43582 211 aaKnown RBP3.22□□□□□ -1.89
TFB3YDR460W YGR025WP53216 100 aa3.22□□□□□ -1.89
TFB3YDR460W DDR2P89113 61 aa3.22□□□□□ -1.89
TFB3YDR460W YJL127C-BQ3E828 52 aa3.22□□□□□ -1.89
TFB3YDR460W BPH1P25356 2167 aa3.22□□□□□ -1.89
TFB3YDR460W RPL39P04650 51 aa3.21□□□□□ -1.9
TFB3YDR460W YIL156W-BQ2V2P4 73 aa3.2□□□□□ -1.9
TFB3YDR460W YGR240C-AQ3E786 66 aa3.2□□□□□ -1.9
TFB3YDR460W YOL085CQ99345 113 aa3.2□□□□□ -1.9
TFB3YDR460W URA2P07259 2214 aaKnown RBP3.2□□□□□ -1.9
TFB3YDR460W YBR230W-AQ3E762 66 aa3.19□□□□□ -1.9
TFB3YDR460W RPC10P40422 70 aa3.18□□□□□ -1.9
TFB3YDR460W RTC6O14464 93 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms