RNA–Protein interactions for RNA: YDR083W

RRP8, Transcript of Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase, yeastyeast

Gene RRP8, Length 1,179 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP8YDR083W RPL37BP51402 88 aaKnown RBP1.5□□□□□ -2.17
RRP8YDR083W YOR343CQ12484 108 aa1.5□□□□□ -2.17
RRP8YDR083W IML1P47170 1584 aa1.49□□□□□ -2.17
RRP8YDR083W FPR2P32472 135 aa1.48□□□□□ -2.17
RRP8YDR083W TOM6P33448 61 aa1.48□□□□□ -2.17
RRP8YDR083W POC4Q12245 148 aaPredicted RBP1.48□□□□□ -2.17
RRP8YDR083W YLR307C-AQ3E825 87 aa1.48□□□□□ -2.17
RRP8YDR083W BLM10P43583 2143 aa1.48□□□□□ -2.17
RRP8YDR083W VMR1P38735 1592 aa1.47□□□□□ -2.17
RRP8YDR083W YDR010CQ12426 110 aa1.47□□□□□ -2.17
RRP8YDR083W YRF1-2P40105 1681 aa1.47□□□□□ -2.17
RRP8YDR083W RIM15P43565 1770 aa1.47□□□□□ -2.17
RRP8YDR083W BCK1Q01389 1478 aa1.46□□□□□ -2.18
RRP8YDR083W YER188C-AP0C0V2 99 aa1.46□□□□□ -2.18
RRP8YDR083W AUA1P32450 94 aa1.46□□□□□ -2.18
RRP8YDR083W PDX3P38075 228 aaKnown RBP1.46□□□□□ -2.18
RRP8YDR083W PAU23Q07987 124 aa1.46□□□□□ -2.18
RRP8YDR083W YOR105WQ08504 108 aa1.46□□□□□ -2.18
RRP8YDR083W PAU17Q12370 124 aa1.46□□□□□ -2.18
RRP8YDR083W YNL042W-BQ3E7Z2 85 aa1.46□□□□□ -2.18
RRP8YDR083W YLR157W-EP0CF00 54 aa1.45□□□□□ -2.18
RRP8YDR083W YHR214C-DP0CX93 97 aa1.45□□□□□ -2.18
RRP8YDR083W APC1P53886 1748 aa1.45□□□□□ -2.18
RRP8YDR083W FAS2P19097 1887 aaKnown RBP1.45□□□□□ -2.18
RRP8YDR083W NUP192P47054 1683 aa1.45□□□□□ -2.18
RRP8YDR083W YPR145C-AQ2V2P0 78 aa1.44□□□□□ -2.18
RRP8YDR083W Q0032Q9ZZX7 96 aa1.44□□□□□ -2.18
RRP8YDR083W STT4P37297 1900 aa1.43□□□□□ -2.18
RRP8YDR083W YAL065CO13511 128 aa1.43□□□□□ -2.18
RRP8YDR083W YDR381C-AQ3E6R5 114 aa1.43□□□□□ -2.18
RRP8YDR083W YHR213W-AQ8TGT4 77 aa1.43□□□□□ -2.18
RRP8YDR083W TOM1Q03280 3268 aa1.42□□□□□ -2.18
RRP8YDR083W LSM2P38203 95 aaKnown RBP1.42□□□□□ -2.18
RRP8YDR083W SMX2P40204 77 aaKnown RBP1.42□□□□□ -2.18
RRP8YDR083W YKL065W-AQ2V2P2 73 aa1.42□□□□□ -2.18
RRP8YDR083W YBR201C-AQ2V2Q3 67 aa1.42□□□□□ -2.18
RRP8YDR083W SWM2P40342 146 aa1.41□□□□□ -2.18
RRP8YDR083W FKS3Q04952 1785 aa1.4□□□□□ -2.19
RRP8YDR083W COX7P10174 60 aa1.4□□□□□ -2.19
RRP8YDR083W YOR314WQ12506 109 aa1.4□□□□□ -2.19
RRP8YDR083W YMR122W-AQ3E842 84 aa1.4□□□□□ -2.19
RRP8YDR083W NOP10Q6Q547 58 aaPredicted RBP1.4□□□□□ -2.19
RRP8YDR083W YBR032WP38223 100 aa1.39□□□□□ -2.19
RRP8YDR083W RPC10P40422 70 aa1.39□□□□□ -2.19
RRP8YDR083W RPL38P49167 78 aaKnown RBP1.39□□□□□ -2.19
RRP8YDR083W SSS1P35179 80 aa1.38□□□□□ -2.19
RRP8YDR083W ATP18P81450 59 aa1.38□□□□□ -2.19
RRP8YDR083W YIL156W-BQ2V2P4 73 aa1.37□□□□□ -2.19
RRP8YDR083W YOL164W-AQ3E7A5 60 aa1.37□□□□□ -2.19
RRP8YDR083W VPS13Q07878 3144 aa1.35□□□□□ -2.19
RRP8YDR083W YFR010W-AP0C5N0 62 aa1.35□□□□□ -2.19
RRP8YDR083W YJR107C-AP0CT86 78 aa1.35□□□□□ -2.19
RRP8YDR083W YDR119W-AQ2V2P9 66 aa1.34□□□□□ -2.19
RRP8YDR083W VMA9Q3E7B6 73 aa1.34□□□□□ -2.19
RRP8YDR083W SGF11Q03067 99 aa1.33□□□□□ -2.2
RRP8YDR083W YOL131WQ08270 108 aa1.33□□□□□ -2.2
RRP8YDR083W SDH6Q3E785 79 aa1.33□□□□□ -2.2
RRP8YDR083W BPH1P25356 2167 aa1.32□□□□□ -2.2
RRP8YDR083W PAI3P01094 68 aa1.32□□□□□ -2.2
RRP8YDR083W QCR9P22289 66 aa1.32□□□□□ -2.2
RRP8YDR083W YNL198CP40166 100 aa1.32□□□□□ -2.2
RRP8YDR083W YNL190WP53872 204 aa1.32□□□□□ -2.2
RRP8YDR083W YOL097W-AQ3E7Y9 61 aa1.32□□□□□ -2.2
RRP8YDR083W YIL134C-AQ45U18 67 aa1.32□□□□□ -2.2
RRP8YDR083W HKR1P41809 1802 aa1.31□□□□□ -2.2
RRP8YDR083W YGR121W-AQ3E816 71 aa1.29□□□□□ -2.2
RRP8YDR083W YPR117WQ06116 2489 aa1.29□□□□□ -2.2
RRP8YDR083W PMD1P32634 1753 aa1.29□□□□□ -2.2
RRP8YDR083W ATX1P38636 73 aa1.28□□□□□ -2.2
RRP8YDR083W FIG2P25653 1609 aa1.27□□□□□ -2.21
RRP8YDR083W FLO1P32768 1537 aa1.27□□□□□ -2.21
RRP8YDR083W TIM12P32830 109 aa1.27□□□□□ -2.21
RRP8YDR083W YLR146W-AQ2V2P1 62 aa1.27□□□□□ -2.21
RRP8YDR083W YPR108W-AQ3E7B3 70 aa1.27□□□□□ -2.21
RRP8YDR083W YIL102C-AQ2V2P5 75 aa1.26□□□□□ -2.21
RRP8YDR083W COX9P07255 59 aa1.25□□□□□ -2.21
RRP8YDR083W YDL022C-AP0C5L6 82 aa1.25□□□□□ -2.21
RRP8YDR083W YDR034W-BQ6Q5X2 51 aa1.25□□□□□ -2.21
RRP8YDR083W NUM1Q00402 2748 aa1.25□□□□□ -2.21
RRP8YDR083W PRP8P33334 2413 aaKnown RBP1.24□□□□□ -2.21
RRP8YDR083W TAO3P40468 2376 aa1.24□□□□□ -2.21
RRP8YDR083W YKL023C-AQ2V2P3 75 aa1.24□□□□□ -2.21
RRP8YDR083W YKL018C-AQ3E7A7 99 aa1.24□□□□□ -2.21
RRP8YDR083W YGR035W-AQ45U48 73 aa1.24□□□□□ -2.21
RRP8YDR083W TEL1P38110 2787 aa1.22□□□□□ -2.21
RRP8YDR083W PAU7P39545 55 aa1.22□□□□□ -2.21
RRP8YDR083W YFL041W-AQ3E817 63 aa1.22□□□□□ -2.21
RRP8YDR083W TOR1P35169 2470 aa1.21□□□□□ -2.22
RRP8YDR083W ATP17Q06405 101 aa1.21□□□□□ -2.22
RRP8YDR083W RPS29BP41058 56 aaKnown RBP1.2□□□□□ -2.22
RRP8YDR083W YFR009W-AP0C5M9 85 aa1.19□□□□□ -2.22
RRP8YDR083W TOR2P32600 2474 aaKnown RBP1.18□□□□□ -2.22
RRP8YDR083W IRA2P19158 3079 aa1.18□□□□□ -2.22
RRP8YDR083W YSY6P38374 65 aa1.18□□□□□ -2.22
RRP8YDR083W EDC1P53080 175 aaPredicted RBP1.18□□□□□ -2.22
RRP8YDR083W COA2Q3E823 68 aa1.18□□□□□ -2.22
RRP8YDR083W YOR032W-AQ8TGS1 66 aa1.18□□□□□ -2.22
RRP8YDR083W IRA1P18963 3092 aa1.16□□□□□ -2.22
RRP8YDR083W CUP1-1P0CX80 61 aa1.15□□□□□ -2.23
RRP8YDR083W CUP1-2P0CX81 61 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms