RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W YLR161WP0CE98 114 aa8.34□□□□□ -1.07
PTP1YDL230W YNL042W-BQ3E7Z2 85 aa8.34□□□□□ -1.07
PTP1YDL230W ECM12O13529 151 aa8.33□□□□□ -1.08
PTP1YDL230W GAT4P40569 121 aa8.33□□□□□ -1.08
PTP1YDL230W YNL184CP53876 108 aa8.33□□□□□ -1.08
PTP1YDL230W YGL041C-BQ3E750 60 aa8.33□□□□□ -1.08
PTP1YDL230W BET1P22804 142 aa8.31□□□□□ -1.08
PTP1YDL230W EMC6Q12431 108 aa8.31□□□□□ -1.08
PTP1YDL230W MRP10O75012 95 aa8.3□□□□□ -1.08
PTP1YDL230W YDR034C-AP0C289 58 aa8.29□□□□□ -1.08
PTP1YDL230W YGL193CP53097 103 aa8.28□□□□□ -1.08
PTP1YDL230W RPL38P49167 78 aaKnown RBP8.27□□□□□ -1.09
PTP1YDL230W SFT1P43682 97 aa8.26□□□□□ -1.09
PTP1YDL230W YAR1P46683 200 aa8.26□□□□□ -1.09
PTP1YDL230W YHL042WP38729 150 aa8.25□□□□□ -1.09
PTP1YDL230W YGR039WP53225 103 aa8.25□□□□□ -1.09
PTP1YDL230W DDR2P89113 61 aa8.24□□□□□ -1.09
PTP1YDL230W YDR119W-AQ2V2P9 66 aa8.24□□□□□ -1.09
PTP1YDL230W RPP2AP05319 106 aaKnown RBP8.23□□□□□ -1.09
PTP1YDL230W SPT4P32914 102 aaPredicted RBP8.23□□□□□ -1.09
PTP1YDL230W ICS3P47034 131 aa8.23□□□□□ -1.09
PTP1YDL230W RSM19P53733 91 aaPredicted RBP8.23□□□□□ -1.09
PTP1YDL230W YLR285C-AQ3E771 56 aa8.23□□□□□ -1.09
PTP1YDL230W BSC4P53841 131 aa8.22□□□□□ -1.09
PTP1YDL230W GIS2P53849 153 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
PTP1YDL230W YHR007C-AQ07074 71 aa8.22□□□□□ -1.09
PTP1YDL230W COF1Q03048 143 aaKnown RBP8.21□□□□□ -1.1
PTP1YDL230W YBL112CQ3E7Y4 105 aa8.21□□□□□ -1.1
PTP1YDL230W TDA2P40045 126 aa8.19□□□□□ -1.1
PTP1YDL230W SHH4Q06236 168 aa8.19□□□□□ -1.1
PTP1YDL230W YHR213W-BQ8TGK1 99 aa8.18□□□□□ -1.1
PTP1YDL230W RPL36BO14455 100 aaKnown RBP8.17□□□□□ -1.1
PTP1YDL230W YSY6P38374 65 aa8.17□□□□□ -1.1
PTP1YDL230W YOL014WQ08110 124 aa8.17□□□□□ -1.1
PTP1YDL230W YHL018WP38744 120 aaPredicted RBP8.16□□□□□ -1.1
PTP1YDL230W RSM18P40033 138 aa8.16□□□□□ -1.1
PTP1YDL230W YOR072WQ08486 104 aa8.15□□□□□ -1.1
PTP1YDL230W YER039C-AP0CD97 72 aa8.14□□□□□ -1.11
PTP1YDL230W EDC2P40023 145 aaPredicted RBP8.14□□□□□ -1.11
PTP1YDL230W COX23P38824 151 aa8.13□□□□□ -1.11
PTP1YDL230W LCL2Q08045 131 aa8.12□□□□□ -1.11
PTP1YDL230W YJL133C-AQ3E7A3 74 aa8.12□□□□□ -1.11
PTP1YDL230W ATP20Q12233 115 aa8.11□□□□□ -1.11
PTP1YDL230W YPL038W-AQ3E7B4 63 aa8.09□□□□□ -1.11
PTP1YDL230W YMR230W-AQ3E7B5 62 aa8.09□□□□□ -1.11
PTP1YDL230W TDA8Q6B2U8 126 aa8.08□□□□□ -1.12
PTP1YDL230W ECM19Q06011 112 aa8.05□□□□□ -1.12
PTP1YDL230W YGR121W-AQ3E816 71 aa8.02□□□□□ -1.13
PTP1YDL230W MIC10Q96VH5 97 aa8.01□□□□□ -1.13
PTP1YDL230W YEL045CP32616 141 aa8□□□□□ -1.13
PTP1YDL230W YLR162WQ06235 118 aa8□□□□□ -1.13
PTP1YDL230W YOR304C-AO14468 76 aa7.99□□□□□ -1.13
PTP1YDL230W YDR246W-AQ3E763 66 aa7.97□□□□□ -1.13
PTP1YDL230W YKL183C-AQ3E765 70 aa7.97□□□□□ -1.13
PTP1YDL230W LCL1Q02786 101 aa7.96□□□□□ -1.14
PTP1YDL230W YJL197C-AP0C5P0 93 aa7.95□□□□□ -1.14
PTP1YDL230W YBR027CP38220 110 aa7.95□□□□□ -1.14
PTP1YDL230W YCR050CP25630 102 aa7.94□□□□□ -1.14
PTP1YDL230W SPG1P50088 95 aa7.94□□□□□ -1.14
PTP1YDL230W YER187WP40102 141 aa7.92□□□□□ -1.14
PTP1YDL230W MMS2P53152 137 aa7.92□□□□□ -1.14
PTP1YDL230W NOP10Q6Q547 58 aaPredicted RBP7.92□□□□□ -1.14
PTP1YDL230W TOM6P33448 61 aa7.91□□□□□ -1.14
PTP1YDL230W YOR314WQ12506 109 aa7.9□□□□□ -1.14
PTP1YDL230W YJR085CP47131 105 aaKnown RBP7.89□□□□□ -1.15
PTP1YDL230W YLR415CO13578 112 aa7.88□□□□□ -1.15
PTP1YDL230W AIM4P38305 123 aaPredicted RBP7.87□□□□□ -1.15
PTP1YDL230W YPL080CQ02826 108 aa7.85□□□□□ -1.15
PTP1YDL230W YCR043CP25361 127 aa7.83□□□□□ -1.16
PTP1YDL230W YOR268CQ08734 132 aa7.82□□□□□ -1.16
PTP1YDL230W YBR182C-AQ8TGU6 64 aa7.82□□□□□ -1.16
PTP1YDL230W DDR48P18899 430 aaKnown RBP7.8□□□□□ -1.16
PTP1YDL230W YAR064WP39563 99 aa7.79□□□□□ -1.16
PTP1YDL230W YIL102CP40488 101 aa7.79□□□□□ -1.16
PTP1YDL230W HOT13P36078 116 aa7.78□□□□□ -1.16
PTP1YDL230W YGL149WP53116 101 aa7.78□□□□□ -1.16
PTP1YDL230W YLR157W-DP0CE99 70 aa7.77□□□□□ -1.17
PTP1YDL230W LIP1Q03579 150 aa7.76□□□□□ -1.17
PTP1YDL230W YOL097W-AQ3E7Y9 61 aa7.76□□□□□ -1.17
PTP1YDL230W YOL166W-AQ8TGJ1 51 aa7.76□□□□□ -1.17
PTP1YDL230W YOL013W-AP0C272 63 aaPredicted RBP7.72□□□□□ -1.17
PTP1YDL230W YIR021W-AQ3E739 70 aa7.72□□□□□ -1.17
PTP1YDL230W RPL36AP05745 100 aaPredicted RBP7.71□□□□□ -1.18
PTP1YDL230W YDR182W-AQ3E796 67 aa7.69□□□□□ -1.18
PTP1YDL230W YDL012CQ12489 107 aa7.67□□□□□ -1.18
PTP1YDL230W YPR153WQ06537 140 aa7.64□□□□□ -1.19
PTP1YDL230W YKL069WP36088 180 aa7.61□□□□□ -1.19
PTP1YDL230W YHL005CP38752 130 aa7.6□□□□□ -1.19
PTP1YDL230W SAP30P38429 201 aa7.59□□□□□ -1.19
PTP1YDL230W RPS30AP0CX33 63 aaKnown RBP7.58□□□□□ -1.2
PTP1YDL230W RPS30BP0CX34 63 aaKnown RBP7.58□□□□□ -1.2
PTP1YDL230W MDN1Q12019 4910 aaKnown RBP7.57□□□□□ -1.2
PTP1YDL230W KTI11Q3E840 82 aa7.55□□□□□ -1.2
PTP1YDL230W YLR361C-AQ3E795 98 aa7.54□□□□□ -1.2
PTP1YDL230W KSH1Q8TGJ3 72 aa7.54□□□□□ -1.2
PTP1YDL230W YFL067WP43537 175 aa7.52□□□□□ -1.21
PTP1YDL230W HHF1P02309 103 aaKnown RBP7.49□□□□□ -1.21
PTP1YDL230W YHR073W-AP0C5N7 58 aa7.48□□□□□ -1.21
PTP1YDL230W YHR125WP38831 101 aa7.48□□□□□ -1.21
PTP1YDL230W YDR010CQ12426 110 aa7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 84.2 ms