RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH5	YDL154W	YOL097W-A	Q3E7Y9	61 aa		0.84	□□□□□ -2.28
MSH5	YDL154W	YGR035W-A	Q45U48	73 aa		0.84	□□□□□ -2.28
MSH5	YDL154W	RRT1	P38192	103 aa		0.83	□□□□□ -2.28
MSH5	YDL154W	CWP2	P43497	92 aa		0.83	□□□□□ -2.28
MSH5	YDL154W	IMP2	P46972	177 aa		0.83	□□□□□ -2.28
MSH5	YDL154W	IRC19	Q07843	230 aa		0.83	□□□□□ -2.28
MSH5	YDL154W	HUB1	Q6Q546	73 aa		0.83	□□□□□ -2.28
MSH5	YDL154W	CDC39	P25655	2108 aa	Known RBP	0.83	□□□□□ -2.28
MSH5	YDL154W	YBR027C	P38220	110 aa		0.83	□□□□□ -2.28
MSH5	YDL154W	TDA2	P40045	126 aa		0.83	□□□□□ -2.28
MSH5	YDL154W	POR2	P40478	281 aa		0.83	□□□□□ -2.28
MSH5	YDL154W	SEN15	Q04675	128 aa		0.83	□□□□□ -2.28
MSH5	YDL154W	YPL261C	Q08976	102 aa		0.83	□□□□□ -2.28
MSH5	YDL154W	YLR307C-A	Q3E825	87 aa		0.83	□□□□□ -2.28
MSH5	YDL154W	CYR1	P08678	2026 aa	Known RBP	0.83	□□□□□ -2.28
MSH5	YDL154W	YER188C-A	P0C0V2	99 aa		0.82	□□□□□ -2.28
MSH5	YDL154W	MRPL31	P14063	131 aa	Predicted RBP	0.82	□□□□□ -2.28
MSH5	YDL154W	HSP150	P32478	413 aa		0.82	□□□□□ -2.28
MSH5	YDL154W	MRX7	P53869	86 aa		0.82	□□□□□ -2.28
MSH5	YDL154W	AIM4	P38305	123 aa	Predicted RBP	0.82	□□□□□ -2.28
MSH5	YDL154W	YEL067C	P39978	195 aa		0.82	□□□□□ -2.28
MSH5	YDL154W	YIR020C	P40575	100 aa		0.82	□□□□□ -2.28
MSH5	YDL154W	Q0297	Q9ZZV8	51 aa		0.82	□□□□□ -2.28
MSH5	YDL154W	RTC6	O14464	93 aa		0.81	□□□□□ -2.28
MSH5	YDL154W	EDC1	P53080	175 aa	Predicted RBP	0.81	□□□□□ -2.28
MSH5	YDL154W	ATP17	Q06405	101 aa		0.81	□□□□□ -2.28
MSH5	YDL154W	YKL018C-A	Q3E7A7	99 aa		0.81	□□□□□ -2.28
MSH5	YDL154W	HMRA2	P0CY13	119 aa		0.81	□□□□□ -2.28
MSH5	YDL154W	PAU24	P38155	120 aa		0.81	□□□□□ -2.28
MSH5	YDL154W	COX23	P38824	151 aa		0.81	□□□□□ -2.28
MSH5	YDL154W	PAU7	P39545	55 aa		0.81	□□□□□ -2.28
MSH5	YDL154W	YJL009W	P47078	108 aa		0.81	□□□□□ -2.28
MSH5	YDL154W	DAD4	P69851	72 aa		0.81	□□□□□ -2.28
MSH5	YDL154W	IRC21	Q04772	201 aa		0.81	□□□□□ -2.28
MSH5	YDL154W	BLM10	P43583	2143 aa		0.81	□□□□□ -2.28
MSH5	YDL154W	YLR194C	Q05777	254 aa		0.8	□□□□□ -2.28
MSH5	YDL154W	YOL166W-A	Q8TGJ1	51 aa		0.8	□□□□□ -2.28
MSH5	YDL154W	YMR141C	P40211	102 aa		0.8	□□□□□ -2.28
MSH5	YDL154W	YIL163C	P40448	117 aa		0.8	□□□□□ -2.28
MSH5	YDL154W	RPS11A	P0CX47	156 aa	Known RBP	0.8	□□□□□ -2.28
MSH5	YDL154W	RPS11B	P0CX48	156 aa	Known RBP	0.8	□□□□□ -2.28
MSH5	YDL154W	BSC4	P53841	131 aa		0.8	□□□□□ -2.28
MSH5	YDL154W	DDR48	P18899	430 aa	Known RBP	0.79	□□□□□ -2.28
MSH5	YDL154W	LCL2	Q08045	131 aa		0.79	□□□□□ -2.28
MSH5	YDL154W	YOR381W-A	Q3E804	55 aa		0.79	□□□□□ -2.28
MSH5	YDL154W	YLR342W-A	Q3E810	57 aa		0.79	□□□□□ -2.28
MSH5	YDL154W	YAL064W	P39711	94 aa		0.79	□□□□□ -2.28
MSH5	YDL154W	YEL014C	P39999	101 aa		0.79	□□□□□ -2.28
MSH5	YDL154W	VPS55	P47111	140 aa		0.79	□□□□□ -2.28
MSH5	YDL154W	YMR122C	Q03879	124 aa		0.79	□□□□□ -2.28
MSH5	YDL154W	YOR072W	Q08486	104 aa		0.79	□□□□□ -2.28
MSH5	YDL154W	YSF3	P0C074	85 aa	Predicted RBP	0.78	□□□□□ -2.28
MSH5	YDL154W	SHU1	P38751	150 aa		0.78	□□□□□ -2.28
MSH5	YDL154W	YLR146W-A	Q2V2P1	62 aa		0.78	□□□□□ -2.28
MSH5	YDL154W	YOR011W-A	Q3E807	68 aa		0.78	□□□□□ -2.28
MSH5	YDL154W	RPL29	P05747	59 aa	Predicted RBP	0.78	□□□□□ -2.29
MSH5	YDL154W	AQY2	P0CD90	149 aa		0.78	□□□□□ -2.29
MSH5	YDL154W	YFL051C	P43552	160 aa		0.78	□□□□□ -2.29
MSH5	YDL154W	ERI1	P62651	68 aa	Known RBP	0.78	□□□□□ -2.29
MSH5	YDL154W	YBR230W-A	Q3E762	66 aa		0.78	□□□□□ -2.29
MSH5	YDL154W	MRPS12	P53732	153 aa		0.77	□□□□□ -2.29
MSH5	YDL154W	SNA2	P56508	79 aa		0.77	□□□□□ -2.29
MSH5	YDL154W	YDR210W	Q03482	75 aa		0.77	□□□□□ -2.29
MSH5	YDL154W	CCW12	Q12127	133 aa		0.77	□□□□□ -2.29
MSH5	YDL154W	MRPL38	P35996	138 aa	Predicted RBP	0.77	□□□□□ -2.29
MSH5	YDL154W	YGL258W-A	Q3E740	77 aa		0.77	□□□□□ -2.29
MSH5	YDL154W	YGL041C-B	Q3E750	60 aa		0.77	□□□□□ -2.29
MSH5	YDL154W	YCR095W-A	Q3E787	52 aa		0.77	□□□□□ -2.29
MSH5	YDL154W	YPR108W-A	Q3E7B3	70 aa		0.77	□□□□□ -2.29
MSH5	YDL154W	COA2	Q3E823	68 aa		0.77	□□□□□ -2.29
MSH5	YDL154W	YHR212W-A	P0CX91	67 aa		0.76	□□□□□ -2.29
MSH5	YDL154W	ATP18	P81450	59 aa		0.76	□□□□□ -2.29
MSH5	YDL154W	YDL241W	Q07738	123 aa		0.76	□□□□□ -2.29
MSH5	YDL154W	MAK31	P23059	88 aa		0.76	□□□□□ -2.29
MSH5	YDL154W	YGR025W	P53216	100 aa		0.76	□□□□□ -2.29
MSH5	YDL154W	YMR007W	Q03675	126 aa		0.76	□□□□□ -2.29
MSH5	YDL154W	YJR107C-A	P0CT86	78 aa		0.75	□□□□□ -2.29
MSH5	YDL154W	RPS29A	P41057	56 aa	Known RBP	0.75	□□□□□ -2.29
MSH5	YDL154W	RRT15	Q3E811	62 aa		0.75	□□□□□ -2.29
MSH5	YDL154W	YEL008W	P40001	126 aa		0.75	□□□□□ -2.29
MSH5	YDL154W	SDH6	Q3E785	79 aa		0.75	□□□□□ -2.29
MSH5	YDL154W	YOR376W-A	Q3E805	51 aa		0.75	□□□□□ -2.29
MSH5	YDL154W	YBL071C	P38185	102 aa		0.74	□□□□□ -2.29
MSH5	YDL154W	YNL190W	P53872	204 aa		0.74	□□□□□ -2.29
MSH5	YDL154W	YNL122C	P53921	115 aa	Predicted RBP	0.74	□□□□□ -2.29
MSH5	YDL154W	YNL042W-B	Q3E7Z2	85 aa		0.74	□□□□□ -2.29
MSH5	YDL154W	NOP10	Q6Q547	58 aa	Predicted RBP	0.74	□□□□□ -2.29
MSH5	YDL154W	TAR1	Q8TGM6	124 aa		0.74	□□□□□ -2.29
MSH5	YDL154W	YGL014C-A	P0C5N1	53 aa		0.73	□□□□□ -2.29
MSH5	YDL154W	RPS30A	P0CX33	63 aa	Known RBP	0.73	□□□□□ -2.29
MSH5	YDL154W	RPS30B	P0CX34	63 aa	Known RBP	0.73	□□□□□ -2.29
MSH5	YDL154W	COX7	P10174	60 aa		0.73	□□□□□ -2.29
MSH5	YDL154W	YIL086C	P40503	102 aa		0.73	□□□□□ -2.29
MSH5	YDL154W	YLR285C-A	Q3E771	56 aa		0.73	□□□□□ -2.29
MSH5	YDL154W	YOR008C-A	Q3E7B9	74 aa		0.73	□□□□□ -2.29
MSH5	YDL154W	YMR001C-A	Q8TGS9	76 aa		0.73	□□□□□ -2.29
MSH5	YDL154W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.73	□□□□□ -2.29
MSH5	YDL154W	HUA1	P40325	198 aa		0.73	□□□□□ -2.29
MSH5	YDL154W	YGR240C-A	Q3E786	66 aa		0.73	□□□□□ -2.29
MSH5	YDL154W	RPL33A	P05744	107 aa	Known RBP	0.73	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms