RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	HHY1	P39982	102 aa		2.39	□□□□□ -2.03
SMP1	YBR182C	YHR213W-B	Q8TGK1	99 aa		2.39	□□□□□ -2.03
SMP1	YBR182C	URB1	P34241	1764 aa	Known RBP	2.39	□□□□□ -2.03
SMP1	YBR182C	FKS3	Q04952	1785 aa		2.39	□□□□□ -2.03
SMP1	YBR182C	APC1	P53886	1748 aa		2.39	□□□□□ -2.03
SMP1	YBR182C	SWM2	P40342	146 aa		2.37	□□□□□ -2.03
SMP1	YBR182C	YDR010C	Q12426	110 aa		2.37	□□□□□ -2.03
SMP1	YBR182C	BRR2	P32639	2163 aa	Known RBP	2.36	□□□□□ -2.03
SMP1	YBR182C	SHU1	P38751	150 aa		2.36	□□□□□ -2.03
SMP1	YBR182C	YJR128W	P47162	119 aa		2.36	□□□□□ -2.03
SMP1	YBR182C	YOR105W	Q08504	108 aa		2.36	□□□□□ -2.03
SMP1	YBR182C	YAL065C	O13511	128 aa		2.36	□□□□□ -2.03
SMP1	YBR182C	PDX3	P38075	228 aa	Known RBP	2.36	□□□□□ -2.03
SMP1	YBR182C	ATX1	P38636	73 aa		2.36	□□□□□ -2.03
SMP1	YBR182C	PAU23	Q07987	124 aa		2.35	□□□□□ -2.03
SMP1	YBR182C	PAU17	Q12370	124 aa		2.35	□□□□□ -2.03
SMP1	YBR182C	ECM29	P38737	1868 aa		2.33	□□□□□ -2.04
SMP1	YBR182C	FPR2	P32472	135 aa		2.33	□□□□□ -2.04
SMP1	YBR182C	YGR121W-A	Q3E816	71 aa		2.33	□□□□□ -2.04
SMP1	YBR182C	YMR141C	P40211	102 aa		2.32	□□□□□ -2.04
SMP1	YBR182C	YFL041W-A	Q3E817	63 aa		2.32	□□□□□ -2.04
SMP1	YBR182C	NOP10	Q6Q547	58 aa	Predicted RBP	2.32	□□□□□ -2.04
SMP1	YBR182C	YFR010W-A	P0C5N0	62 aa		2.31	□□□□□ -2.04
SMP1	YBR182C	YIL156W-B	Q2V2P4	73 aa		2.31	□□□□□ -2.04
SMP1	YBR182C	QCR9	P22289	66 aa		2.3	□□□□□ -2.04
SMP1	YBR182C	RIM15	P43565	1770 aa		2.3	□□□□□ -2.04
SMP1	YBR182C	SSS1	P35179	80 aa		2.29	□□□□□ -2.04
SMP1	YBR182C	YNL042W-B	Q3E7Z2	85 aa		2.29	□□□□□ -2.04
SMP1	YBR182C	SEC16	P48415	2195 aa	Known RBP	2.27	□□□□□ -2.05
SMP1	YBR182C	TIM12	P32830	109 aa		2.27	□□□□□ -2.05
SMP1	YBR182C	YHR173C	P38864	112 aa		2.27	□□□□□ -2.05
SMP1	YBR182C	RPL37A	P49166	88 aa	Known RBP	2.26	□□□□□ -2.05
SMP1	YBR182C	UTP10	P42945	1769 aa	Known RBP	2.26	□□□□□ -2.05
SMP1	YBR182C	YMR122W-A	Q3E842	84 aa		2.25	□□□□□ -2.05
SMP1	YBR182C	YOL131W	Q08270	108 aa		2.24	□□□□□ -2.05
SMP1	YBR182C	YOR034C-A	Q3E735	80 aa		2.24	□□□□□ -2.05
SMP1	YBR182C	YGR035W-A	Q45U48	73 aa		2.24	□□□□□ -2.05
SMP1	YBR182C	YBR201C-A	Q2V2Q3	67 aa		2.23	□□□□□ -2.05
SMP1	YBR182C	Q0032	Q9ZZX7	96 aa		2.22	□□□□□ -2.05
SMP1	YBR182C	PMD1	P32634	1753 aa		2.21	□□□□□ -2.06
SMP1	YBR182C	MOT1	P32333	1867 aa		2.21	□□□□□ -2.06
SMP1	YBR182C	SPI1	P40092	148 aa		2.21	□□□□□ -2.06
SMP1	YBR182C	FIG2	P25653	1609 aa		2.2	□□□□□ -2.06
SMP1	YBR182C	STT4	P37297	1900 aa		2.2	□□□□□ -2.06
SMP1	YBR182C	YDL022C-A	P0C5L6	82 aa		2.2	□□□□□ -2.06
SMP1	YBR182C	YNL198C	P40166	100 aa		2.19	□□□□□ -2.06
SMP1	YBR182C	VMA9	Q3E7B6	73 aa		2.19	□□□□□ -2.06
SMP1	YBR182C	FLO1	P32768	1537 aa		2.19	□□□□□ -2.06
SMP1	YBR182C	COX7	P10174	60 aa		2.18	□□□□□ -2.06
SMP1	YBR182C	YBR072C-A	Q3E794	53 aa		2.18	□□□□□ -2.06
SMP1	YBR182C	HKR1	P41809	1802 aa		2.18	□□□□□ -2.06
SMP1	YBR182C	ATP18	P81450	59 aa		2.17	□□□□□ -2.06
SMP1	YBR182C	POL2	P21951	2222 aa	Known RBP	2.16	□□□□□ -2.06
SMP1	YBR182C	YIL134C-A	Q45U18	67 aa		2.16	□□□□□ -2.06
SMP1	YBR182C	ERI1	P62651	68 aa	Known RBP	2.15	□□□□□ -2.07
SMP1	YBR182C	YIL102C-A	Q2V2P5	75 aa		2.15	□□□□□ -2.07
SMP1	YBR182C	YOL097W-A	Q3E7Y9	61 aa		2.15	□□□□□ -2.07
SMP1	YBR182C	RPL43A	P0CX25	92 aa	Known RBP	2.14	□□□□□ -2.07
SMP1	YBR182C	RPL43B	P0CX26	92 aa		2.14	□□□□□ -2.07
SMP1	YBR182C	PAU7	P39545	55 aa		2.14	□□□□□ -2.07
SMP1	YBR182C	SGF11	Q03067	99 aa		2.14	□□□□□ -2.07
SMP1	YBR182C	URA2	P07259	2214 aa	Known RBP	2.13	□□□□□ -2.07
SMP1	YBR182C	ATP17	Q06405	101 aa		2.11	□□□□□ -2.07
SMP1	YBR182C	YDR246W-A	Q3E763	66 aa		2.11	□□□□□ -2.07
SMP1	YBR182C	YSY6	P38374	65 aa		2.1	□□□□□ -2.07
SMP1	YBR182C	RPL38	P49167	78 aa	Known RBP	2.1	□□□□□ -2.07
SMP1	YBR182C	AUA1	P32450	94 aa		2.1	□□□□□ -2.07
SMP1	YBR182C	RPL37B	P51402	88 aa	Known RBP	2.1	□□□□□ -2.07
SMP1	YBR182C	YOR032W-A	Q8TGS1	66 aa		2.1	□□□□□ -2.07
SMP1	YBR182C	YDR524C-B	Q3E6R4	66 aa		2.08	□□□□□ -2.08
SMP1	YBR182C	YKL018C-A	Q3E7A7	99 aa		2.08	□□□□□ -2.08
SMP1	YBR182C	SDH6	Q3E785	79 aa		2.07	□□□□□ -2.08
SMP1	YBR182C	YLR307C-A	Q3E825	87 aa		2.07	□□□□□ -2.08
SMP1	YBR182C	TOM1	Q03280	3268 aa		2.06	□□□□□ -2.08
SMP1	YBR182C	RPC10	P40422	70 aa		2.06	□□□□□ -2.08
SMP1	YBR182C	YLR157W-E	P0CF00	54 aa		2.05	□□□□□ -2.08
SMP1	YBR182C	BPH1	P25356	2167 aa		2.04	□□□□□ -2.08
SMP1	YBR182C	SMX2	P40204	77 aa	Known RBP	2.04	□□□□□ -2.08
SMP1	YBR182C	YKL023C-A	Q2V2P3	75 aa		2.04	□□□□□ -2.08
SMP1	YBR182C	YPR108W-A	Q3E7B3	70 aa		2.03	□□□□□ -2.08
SMP1	YBR182C	BLM10	P43583	2143 aa		2.03	□□□□□ -2.09
SMP1	YBR182C	YDR182W-A	Q3E796	67 aa		2.02	□□□□□ -2.09
SMP1	YBR182C	YNL190W	P53872	204 aa		2.01	□□□□□ -2.09
SMP1	YBR182C	YBR032W	P38223	100 aa		1.99	□□□□□ -2.09
SMP1	YBR182C	HUB1	Q6Q546	73 aa		1.98	□□□□□ -2.09
SMP1	YBR182C	YJR107C-A	P0CT86	78 aa		1.98	□□□□□ -2.09
SMP1	YBR182C	RPS30A	P0CX33	63 aa	Known RBP	1.95	□□□□□ -2.1
SMP1	YBR182C	RPS30B	P0CX34	63 aa	Known RBP	1.95	□□□□□ -2.1
SMP1	YBR182C	VPS13	Q07878	3144 aa		1.94	□□□□□ -2.1
SMP1	YBR182C	EDC1	P53080	175 aa	Predicted RBP	1.93	□□□□□ -2.1
SMP1	YBR182C	TAO3	P40468	2376 aa		1.92	□□□□□ -2.1
SMP1	YBR182C	YLR146W-A	Q2V2P1	62 aa		1.91	□□□□□ -2.1
SMP1	YBR182C	YOL164W-A	Q3E7A5	60 aa		1.91	□□□□□ -2.1
SMP1	YBR182C	YDR034W-B	Q6Q5X2	51 aa		1.88	□□□□□ -2.11
SMP1	YBR182C	YOL166W-A	Q8TGJ1	51 aa		1.87	□□□□□ -2.11
SMP1	YBR182C	YBL039W-B	P0C268	59 aa		1.86	□□□□□ -2.11
SMP1	YBR182C	YBR200W-A	Q3E755	54 aa		1.85	□□□□□ -2.11
SMP1	YBR182C	YOR011W-A	Q3E807	68 aa		1.85	□□□□□ -2.11
SMP1	YBR182C	RPS27A	P35997	82 aa	Known RBP	1.84	□□□□□ -2.12
SMP1	YBR182C	RPS27B	P38711	82 aa		1.84	□□□□□ -2.12

Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms