RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W YBR219CP38317 127 aa1.41□□□□□ -2.18
NUP170YBL079W NSE4P43124 402 aa1.41□□□□□ -2.18
NUP170YBL079W YIL014C-AQ02598 104 aa1.41□□□□□ -2.18
NUP170YBL079W HPA2Q06592 156 aa1.41□□□□□ -2.18
NUP170YBL079W YHR073W-AP0C5N7 58 aa1.41□□□□□ -2.18
NUP170YBL079W YER181CP40097 107 aa1.41□□□□□ -2.18
NUP170YBL079W RGM1Q00453 211 aa1.41□□□□□ -2.18
NUP170YBL079W ELC1Q03071 99 aa1.41□□□□□ -2.18
NUP170YBL079W BSC4P53841 131 aa1.41□□□□□ -2.18
NUP170YBL079W COF1Q03048 143 aaKnown RBP1.41□□□□□ -2.18
NUP170YBL079W YNL162W-AQ3E7A8 72 aa1.41□□□□□ -2.18
NUP170YBL079W YLR255CO13574 117 aa1.4□□□□□ -2.18
NUP170YBL079W RPL37BP51402 88 aaKnown RBP1.4□□□□□ -2.18
NUP170YBL079W PAI3P01094 68 aa1.4□□□□□ -2.19
NUP170YBL079W SMP1P38128 452 aa1.4□□□□□ -2.19
NUP170YBL079W HUR1P45820 110 aa1.4□□□□□ -2.19
NUP170YBL079W RSM19P53733 91 aaPredicted RBP1.4□□□□□ -2.19
NUP170YBL079W MPC3P53311 146 aa1.39□□□□□ -2.19
NUP170YBL079W RPL28P02406 149 aaKnown RBP1.39□□□□□ -2.19
NUP170YBL079W ICS3P47034 131 aa1.39□□□□□ -2.19
NUP170YBL079W ECM19Q06011 112 aa1.39□□□□□ -2.19
NUP170YBL079W HOT13P36078 116 aa1.39□□□□□ -2.19
NUP170YBL079W YNL184CP53876 108 aa1.39□□□□□ -2.19
NUP170YBL079W AIM4P38305 123 aaPredicted RBP1.38□□□□□ -2.19
NUP170YBL079W YHR007C-AQ07074 71 aa1.38□□□□□ -2.19
NUP170YBL079W TDA8Q6B2U8 126 aa1.38□□□□□ -2.19
NUP170YBL079W HUA1P40325 198 aa1.38□□□□□ -2.19
NUP170YBL079W ATP18P81450 59 aa1.37□□□□□ -2.19
NUP170YBL079W Q0142Q9ZZW4 58 aa1.37□□□□□ -2.19
NUP170YBL079W LSM6Q06406 86 aaKnown RBP1.37□□□□□ -2.19
NUP170YBL079W YJL133C-AQ3E7A3 74 aa1.37□□□□□ -2.19
NUP170YBL079W YBR090CP38253 122 aa1.37□□□□□ -2.19
NUP170YBL079W YER187WP40102 141 aa1.37□□□□□ -2.19
NUP170YBL079W YLR363W-AQ3E747 85 aa1.37□□□□□ -2.19
NUP170YBL079W COX23P38824 151 aa1.36□□□□□ -2.19
NUP170YBL079W YCR085WP25650 117 aa1.36□□□□□ -2.19
NUP170YBL079W YHL042WP38729 150 aa1.36□□□□□ -2.19
NUP170YBL079W YBR298C-AQ8TGK4 73 aa1.36□□□□□ -2.19
NUP170YBL079W MRPL44P19956 98 aa1.36□□□□□ -2.19
NUP170YBL079W YCR050CP25630 102 aa1.36□□□□□ -2.19
NUP170YBL079W YDL022C-AP0C5L6 82 aa1.36□□□□□ -2.19
NUP170YBL079W SSS1P35179 80 aa1.36□□□□□ -2.19
NUP170YBL079W LSM8P47093 109 aaKnown RBP1.35□□□□□ -2.19
NUP170YBL079W MRPS12P53732 153 aa1.35□□□□□ -2.19
NUP170YBL079W YJR107C-AP0CT86 78 aa1.35□□□□□ -2.19
NUP170YBL079W SAE3P89114 91 aa1.35□□□□□ -2.19
NUP170YBL079W YLR162WQ06235 118 aa1.35□□□□□ -2.19
NUP170YBL079W YGR164WP53291 111 aa1.34□□□□□ -2.19
NUP170YBL079W YLR296WQ05898 108 aa1.34□□□□□ -2.19
NUP170YBL079W YDR210WQ03482 75 aa1.34□□□□□ -2.2
NUP170YBL079W LIP1Q03579 150 aa1.34□□□□□ -2.2
NUP170YBL079W NAT5Q08689 176 aa1.34□□□□□ -2.2
NUP170YBL079W YFL041W-AQ3E817 63 aa1.33□□□□□ -2.2
NUP170YBL079W UIP3P39547 235 aa1.33□□□□□ -2.2
NUP170YBL079W YDL085C-AQ3E7B7 68 aaKnown RBP1.33□□□□□ -2.2
NUP170YBL079W RPL36AP05745 100 aaPredicted RBP1.32□□□□□ -2.2
NUP170YBL079W YBR027CP38220 110 aa1.32□□□□□ -2.2
NUP170YBL079W INO4P13902 151 aa1.32□□□□□ -2.2
NUP170YBL079W MIC10Q96VH5 97 aa1.32□□□□□ -2.2
NUP170YBL079W YKL183C-AQ3E765 70 aa1.32□□□□□ -2.2
NUP170YBL079W ATP20Q12233 115 aa1.31□□□□□ -2.2
NUP170YBL079W TMA7Q3E764 64 aaKnown RBP1.31□□□□□ -2.2
NUP170YBL079W YHR213W-BQ8TGK1 99 aa1.31□□□□□ -2.2
NUP170YBL079W YBR016WP38216 128 aa1.31□□□□□ -2.2
NUP170YBL079W YJL009WP47078 108 aa1.31□□□□□ -2.2
NUP170YBL079W RSM18P40033 138 aa1.3□□□□□ -2.2
NUP170YBL079W EMC6Q12431 108 aa1.3□□□□□ -2.2
NUP170YBL079W SKI6P46948 246 aaPredicted RBP1.3□□□□□ -2.2
NUP170YBL079W YPR153WQ06537 140 aa1.3□□□□□ -2.2
NUP170YBL079W YDL012CQ12489 107 aa1.29□□□□□ -2.2
NUP170YBL079W OLI1P61829 76 aa1.29□□□□□ -2.2
NUP170YBL079W YIL102C-AQ2V2P5 75 aa1.29□□□□□ -2.2
NUP170YBL079W MID2P36027 376 aa1.28□□□□□ -2.2
NUP170YBL079W DSE2P38844 325 aa1.28□□□□□ -2.2
NUP170YBL079W HHF1P02309 103 aaKnown RBP1.28□□□□□ -2.2
NUP170YBL079W LSO2Q3E772 92 aaKnown RBP1.28□□□□□ -2.2
NUP170YBL079W YIL156W-BQ2V2P4 73 aa1.28□□□□□ -2.2
NUP170YBL079W COX8P04039 78 aa1.27□□□□□ -2.21
NUP170YBL079W YAR064WP39563 99 aa1.27□□□□□ -2.21
NUP170YBL079W YSY6P38374 65 aa1.27□□□□□ -2.21
NUP170YBL079W YIL134C-AQ45U18 67 aa1.27□□□□□ -2.21
NUP170YBL079W YNR077CP53758 84 aa1.26□□□□□ -2.21
NUP170YBL079W MRX7P53869 86 aa1.26□□□□□ -2.21
NUP170YBL079W YOR316C-AQ3E806 69 aa1.26□□□□□ -2.21
NUP170YBL079W YBL008W-AQ3E821 79 aa1.26□□□□□ -2.21
NUP170YBL079W YJR128WP47162 119 aa1.25□□□□□ -2.21
NUP170YBL079W YPL080CQ02826 108 aa1.25□□□□□ -2.21
NUP170YBL079W YOR314WQ12506 109 aa1.25□□□□□ -2.21
NUP170YBL079W YGR039WP53225 103 aa1.24□□□□□ -2.21
NUP170YBL079W YFR009W-AP0C5M9 85 aa1.24□□□□□ -2.21
NUP170YBL079W EDC1P53080 175 aaPredicted RBP1.23□□□□□ -2.21
NUP170YBL079W RPL38P49167 78 aaKnown RBP1.23□□□□□ -2.21
NUP170YBL079W YLR361C-AQ3E795 98 aa1.23□□□□□ -2.21
NUP170YBL079W YGR146C-AQ8TGT9 53 aa1.22□□□□□ -2.21
NUP170YBL079W YER175W-AQ8TGU4 54 aa1.22□□□□□ -2.21
NUP170YBL079W OST5Q92316 86 aa1.21□□□□□ -2.22
NUP170YBL079W ATX1P38636 73 aa1.21□□□□□ -2.22
NUP170YBL079W YDR381C-AQ3E6R5 114 aa1.21□□□□□ -2.22
NUP170YBL079W PBI2P0CT04 75 aaKnown RBP1.21□□□□□ -2.22
NUP170YBL079W YKL065W-AQ2V2P2 73 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms