RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	RPS23B	P0CX30	145 aa		2.88	□□□□□ -1.95
PIM1	YBL022C	VAM10	Q08474	114 aa		2.88	□□□□□ -1.95
PIM1	YBL022C	RPS11A	P0CX47	156 aa	Known RBP	2.87	□□□□□ -1.95
PIM1	YBL022C	RPS11B	P0CX48	156 aa	Known RBP	2.87	□□□□□ -1.95
PIM1	YBL022C	YNL162W-A	Q3E7A8	72 aa		2.87	□□□□□ -1.95
PIM1	YBL022C	FAB1	P34756	2278 aa		2.87	□□□□□ -1.95
PIM1	YBL022C	YBR144C	P34215	104 aa		2.86	□□□□□ -1.95
PIM1	YBL022C	COX23	P38824	151 aa		2.86	□□□□□ -1.95
PIM1	YBL022C	YGL088W	P53151	121 aa		2.86	□□□□□ -1.95
PIM1	YBL022C	YLR307C-A	Q3E825	87 aa		2.86	□□□□□ -1.95
PIM1	YBL022C	MRPS8	Q03799	155 aa		2.85	□□□□□ -1.95
PIM1	YBL022C	YPR153W	Q06537	140 aa		2.85	□□□□□ -1.95
PIM1	YBL022C	YPR010C-A	A5Z2X5	72 aa		2.84	□□□□□ -1.95
PIM1	YBL022C	RDS3	Q06835	107 aa	Predicted RBP	2.84	□□□□□ -1.95
PIM1	YBL022C	POL2	P21951	2222 aa	Known RBP	2.84	□□□□□ -1.96
PIM1	YBL022C	DIF1	O13577	133 aa		2.83	□□□□□ -1.96
PIM1	YBL022C	YER135C	P40082	130 aa		2.83	□□□□□ -1.96
PIM1	YBL022C	YDR034W-B	Q6Q5X2	51 aa		2.83	□□□□□ -1.96
PIM1	YBL022C	OST5	Q92316	86 aa		2.83	□□□□□ -1.96
PIM1	YBL022C	YER145C-A	A0A023PYF4	145 aa		2.82	□□□□□ -1.96
PIM1	YBL022C	YIL156W-B	Q2V2P4	73 aa		2.82	□□□□□ -1.96
PIM1	YBL022C	YGR045C	P53229	120 aa		2.81	□□□□□ -1.96
PIM1	YBL022C	TAR1	Q8TGM6	124 aa		2.81	□□□□□ -1.96
PIM1	YBL022C	YIR020C	P40575	100 aa		2.81	□□□□□ -1.96
PIM1	YBL022C	YCL048W-A	Q2V2Q2	79 aa		2.81	□□□□□ -1.96
PIM1	YBL022C	YBR126W-A	Q8TGU7	68 aa		2.81	□□□□□ -1.96
PIM1	YBL022C	YOL013W-A	P0C272	63 aa	Predicted RBP	2.8	□□□□□ -1.96
PIM1	YBL022C	YJL197C-A	P0C5P0	93 aa		2.8	□□□□□ -1.96
PIM1	YBL022C	IGD1	P43598	195 aa		2.8	□□□□□ -1.96
PIM1	YBL022C	LIP1	Q03579	150 aa		2.8	□□□□□ -1.96
PIM1	YBL022C	YDL241W	Q07738	123 aa		2.8	□□□□□ -1.96
PIM1	YBL022C	HOT13	P36078	116 aa		2.79	□□□□□ -1.96
PIM1	YBL022C	YCR001W	P25347	104 aa		2.79	□□□□□ -1.96
PIM1	YBL022C	EDC2	P40023	145 aa	Predicted RBP	2.79	□□□□□ -1.96
PIM1	YBL022C	FYV5	P25585	152 aa		2.78	□□□□□ -1.96
PIM1	YBL022C	YGL149W	P53116	101 aa		2.78	□□□□□ -1.96
PIM1	YBL022C	RPL38	P49167	78 aa	Known RBP	2.78	□□□□□ -1.96
PIM1	YBL022C	ECM19	Q06011	112 aa		2.78	□□□□□ -1.96
PIM1	YBL022C	TDA2	P40045	126 aa		2.77	□□□□□ -1.97
PIM1	YBL022C	YDR010C	Q12426	110 aa		2.77	□□□□□ -1.97
PIM1	YBL022C	YNL042W-B	Q3E7Z2	85 aa		2.77	□□□□□ -1.97
PIM1	YBL022C	YHR213W-B	Q8TGK1	99 aa		2.77	□□□□□ -1.97
PIM1	YBL022C	YBR230W-A	Q3E762	66 aa		2.77	□□□□□ -1.97
PIM1	YBL022C	TSC3	Q3E790	80 aa		2.77	□□□□□ -1.97
PIM1	YBL022C	YOR011W-A	Q3E807	68 aa		2.77	□□□□□ -1.97
PIM1	YBL022C	DYN1	P36022	4092 aa		2.76	□□□□□ -1.97
PIM1	YBL022C	YHR125W	P38831	101 aa		2.75	□□□□□ -1.97
PIM1	YBL022C	TMC1	Q08422	150 aa	Predicted RBP	2.74	□□□□□ -1.97
PIM1	YBL022C	YAL064W	P39711	94 aa		2.74	□□□□□ -1.97
PIM1	YBL022C	MVB12	P42939	101 aa		2.74	□□□□□ -1.97
PIM1	YBL022C	SPG1	P50088	95 aa		2.74	□□□□□ -1.97
PIM1	YBL022C	PMP3	P87284	55 aa		2.74	□□□□□ -1.97
PIM1	YBL022C	AQY2	P0CD90	149 aa		2.73	□□□□□ -1.97
PIM1	YBL022C	YCR043C	P25361	127 aa		2.73	□□□□□ -1.97
PIM1	YBL022C	COX17	Q12287	69 aa		2.73	□□□□□ -1.97
PIM1	YBL022C	YJL133C-A	Q3E7A3	74 aa		2.73	□□□□□ -1.97
PIM1	YBL022C	BPH1	P25356	2167 aa		2.73	□□□□□ -1.97
PIM1	YBL022C	AUA1	P32450	94 aa		2.73	□□□□□ -1.97
PIM1	YBL022C	RPC10	P40422	70 aa		2.73	□□□□□ -1.97
PIM1	YBL022C	MRX7	P53869	86 aa		2.72	□□□□□ -1.97
PIM1	YBL022C	HOR7	Q05827	59 aa		2.71	□□□□□ -1.98
PIM1	YBL022C	YMR001C-A	Q8TGS9	76 aa		2.71	□□□□□ -1.98
PIM1	YBL022C	YBR027C	P38220	110 aa		2.7	□□□□□ -1.98
PIM1	YBL022C	BSC4	P53841	131 aa		2.7	□□□□□ -1.98
PIM1	YBL022C	ATP17	Q06405	101 aa		2.7	□□□□□ -1.98
PIM1	YBL022C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
PIM1	YBL022C	YDL012C	Q12489	107 aa		2.7	□□□□□ -1.98
PIM1	YBL022C	YDR115W	Q04598	105 aa		2.69	□□□□□ -1.98
PIM1	YBL022C	LCL2	Q08045	131 aa		2.69	□□□□□ -1.98
PIM1	YBL022C	FYV12	Q08559	129 aa		2.69	□□□□□ -1.98
PIM1	YBL022C	HUB1	Q6Q546	73 aa		2.69	□□□□□ -1.98
PIM1	YBL022C	YJL127C-B	Q3E828	52 aa		2.68	□□□□□ -1.98
PIM1	YBL022C	RPL33A	P05744	107 aa	Known RBP	2.68	□□□□□ -1.98
PIM1	YBL022C	RPL33B	P41056	107 aa	Known RBP	2.68	□□□□□ -1.98
PIM1	YBL022C	YLL066W-B	Q8TGJ7	56 aa		2.67	□□□□□ -1.98
PIM1	YBL022C	HFA1	P32874	2273 aa		2.67	□□□□□ -1.98
PIM1	YBL022C	SPC1	P46965	94 aa		2.67	□□□□□ -1.98
PIM1	YBL022C	YGR240C-A	Q3E786	66 aa		2.67	□□□□□ -1.98
PIM1	YBL022C	YAR023C	D6VPM8	179 aa		2.67	□□□□□ -1.98
PIM1	YBL022C	YBL039W-B	P0C268	59 aa		2.67	□□□□□ -1.98
PIM1	YBL022C	YLR157W-D	P0CE99	70 aa		2.67	□□□□□ -1.98
PIM1	YBL022C	SDH6	Q3E785	79 aa		2.67	□□□□□ -1.98
PIM1	YBL022C	YCR095W-A	Q3E787	52 aa		2.66	□□□□□ -1.98
PIM1	YBL022C	QCR10	P37299	77 aa		2.66	□□□□□ -1.98
PIM1	YBL022C	YBR056W-A	I2HB52	66 aa		2.65	□□□□□ -1.98
PIM1	YBL022C	DDR2	P89113	61 aa		2.65	□□□□□ -1.99
PIM1	YBL022C	YAR064W	P39563	99 aa		2.65	□□□□□ -1.99
PIM1	YBL022C	YIL102C	P40488	101 aa		2.64	□□□□□ -1.99
PIM1	YBL022C	YFR032C-B	Q8TGU2	87 aa		2.64	□□□□□ -1.99
PIM1	YBL022C	DDR48	P18899	430 aa	Known RBP	2.64	□□□□□ -1.99
PIM1	YBL022C	YNL122C	P53921	115 aa	Predicted RBP	2.64	□□□□□ -1.99
PIM1	YBL022C	YLR255C	O13574	117 aa		2.63	□□□□□ -1.99
PIM1	YBL022C	SOM1	Q05676	74 aa		2.62	□□□□□ -1.99
PIM1	YBL022C	RTC6	O14464	93 aa		2.61	□□□□□ -1.99
PIM1	YBL022C	YDR210W	Q03482	75 aa		2.61	□□□□□ -1.99
PIM1	YBL022C	YBR182C-A	Q8TGU6	64 aa		2.61	□□□□□ -1.99
PIM1	YBL022C	YBL008W-A	Q3E821	79 aa		2.6	□□□□□ -1.99
PIM1	YBL022C	YMR230W-A	Q3E7B5	62 aa		2.58	□□□□□ -2
PIM1	YBL022C	YHR007C-A	Q07074	71 aa		2.58	□□□□□ -2
PIM1	YBL022C	YCL042W	P25572	119 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms