RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 USP34Q70CQ2 3546 aa20.4■□□□□ 0.86
TCF3-219ENST00000610756 COL4A2P08572 1712 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 LEFTY2O00292 366 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 SP9P0CG40 484 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 ARSAP15289 507 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 TBXAS1P24557 533 aaPredicted RBP20.39■□□□□ 0.85
TCF3-219ENST00000610756 YWHAEP62258 255 aaKnown RBP20.39■□□□□ 0.85
TCF3-219ENST00000610756 KCNH2Q12809 1159 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 MTAPQ13126 283 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 DGKKQ5KSL6 1271 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 HECTD3Q5T447 861 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 ARHGAP17Q68EM7 881 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 LMO3Q8TAP4 145 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 ATP2A3Q93084 1043 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 LINC00597Q9H2U6 94 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 ECT2Q9H8V3 914 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 SCML2Q9UQR0 700 aa20.39■□□□□ 0.85
TCF3-219ENST00000610756 VPS13AQ96RL7 3174 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 TRDMT1O14717 391 aaKnown RBP20.38■□□□□ 0.85
TCF3-219ENST00000610756 COCHO43405 550 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 CCDC192P0DO97 292 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 IFNAR2P48551 515 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 LRRC32Q14392 662 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 EML3Q32P44 896 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 SYNPOQ8N3V7 929 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 MED15Q96RN5 788 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 TLR8Q9NR97 1041 aaKnown RBP20.38■□□□□ 0.85
TCF3-219ENST00000610756 LMBRD1Q9NUN5 540 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 GMIPQ9P107 970 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 KIAA1257Q9ULG3 409 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 CPQQ9Y646 472 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 WNT6Q9Y6F9 365 aa20.38■□□□□ 0.85
TCF3-219ENST00000610756 ZFHX2Q9C0A1 2572 aaPredicted RBP20.37■□□□□ 0.85
TCF3-219ENST00000610756 ACO1P21399 889 aaKnown RBP20.37■□□□□ 0.85
TCF3-219ENST00000610756 KIF11P52732 1056 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 LRMPQ12912 555 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 NR1H3Q13133 447 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 CCINQ13939 588 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 PON2Q15165 354 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 GPRIN1Q7Z2K8 1008 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 DDX42Q86XP3 938 aaKnown RBP eCLIP20.37■□□□□ 0.85
TCF3-219ENST00000610756 ADGRG2Q8IZP9 1017 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 CPA6Q8N4T0 437 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 UBR7Q8N806 425 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 ANKRD52Q8NB46 1076 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 EHBP1Q8NDI1 1231 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 TTC16Q8NEE8 873 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 CHFRQ96EP1 664 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 NT5C1BQ96P26 610 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 SEMA4AQ9H3S1 761 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.37■□□□□ 0.85
TCF3-219ENST00000610756 OBSL1O75147 1896 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 TICRRQ7Z2Z1 1910 aa20.37■□□□□ 0.85
TCF3-219ENST00000610756 CACNA1IQ9P0X4 2223 aa20.36■□□□□ 0.85
TCF3-219ENST00000610756 MBL2P11226 248 aaPredicted RBP20.36■□□□□ 0.85
TCF3-219ENST00000610756 GJA4P35212 333 aa20.36■□□□□ 0.85
TCF3-219ENST00000610756 PGFP49763 221 aa20.36■□□□□ 0.85
TCF3-219ENST00000610756 TMEM196Q5HYL7 178 aa20.36■□□□□ 0.85
TCF3-219ENST00000610756 CCSER2Q9H7U1 834 aa20.36■□□□□ 0.85
TCF3-219ENST00000610756 SMPD4Q9NXE4 827 aa20.36■□□□□ 0.85
TCF3-219ENST00000610756 USP3Q9Y6I4 520 aa20.36■□□□□ 0.85
TCF3-219ENST00000610756 ANAPC1Q9H1A4 1944 aa20.36■□□□□ 0.85
TCF3-219ENST00000610756 SLC9A3R1O14745 358 aaPredicted RBP20.35■□□□□ 0.85
TCF3-219ENST00000610756 AFPP02771 609 aaKnown RBP20.35■□□□□ 0.85
TCF3-219ENST00000610756 CSTF1Q05048 431 aaKnown RBP20.35■□□□□ 0.85
TCF3-219ENST00000610756 GRSF1Q12849 480 aaKnown RBP eCLIP20.35■□□□□ 0.85
TCF3-219ENST00000610756 GAS6Q14393 721 aa20.35■□□□□ 0.85
TCF3-219ENST00000610756 SPEM1Q8N4L4 309 aa20.35■□□□□ 0.85
TCF3-219ENST00000610756 NELL1Q92832 810 aa20.35■□□□□ 0.85
TCF3-219ENST00000610756 EXOC4Q96A65 974 aa20.35■□□□□ 0.85
TCF3-219ENST00000610756 ZFRQ96KR1 1074 aaKnown RBP20.35■□□□□ 0.85
TCF3-219ENST00000610756 PRMT8Q9NR22 394 aaPredicted RBP20.35■□□□□ 0.85
TCF3-219ENST00000610756 RBM12Q9NTZ6 932 aaKnown RBP20.35■□□□□ 0.85
TCF3-219ENST00000610756 CFAP97Q9P2B7 532 aa20.35■□□□□ 0.85
TCF3-219ENST00000610756 E2F8A0AVK6 867 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 TLR5O60602 858 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 NFATC1O95644 943 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 VDRP11473 427 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 PSEN1P49768 467 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 GALK1P51570 392 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 SLC8A3P57103 927 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 SGO2Q562F6 1265 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 ZC3H14Q6PJT7 736 aaKnown RBP20.34■□□□□ 0.85
TCF3-219ENST00000610756 CCDC186Q7Z3E2 898 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 ZNF276Q8N554 614 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 NKD2Q969F2 451 aaPredicted RBP20.34■□□□□ 0.85
TCF3-219ENST00000610756 JAKMIP2Q96AA8 810 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 NUP62CLQ9H1M0 184 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 FBRSL1Q9HCM7 1045 aaKnown RBP20.34■□□□□ 0.85
TCF3-219ENST00000610756 CYLDQ9NQC7 956 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 TBC1D14Q9P2M4 693 aa20.34■□□□□ 0.85
TCF3-219ENST00000610756 PAEPP09466 180 aa20.33■□□□□ 0.85
TCF3-219ENST00000610756 DRD1P21728 446 aa20.33■□□□□ 0.85
TCF3-219ENST00000610756 ATP5C1P36542 298 aaKnown RBP20.33■□□□□ 0.85
TCF3-219ENST00000610756 CXCL12P48061 93 aa20.33■□□□□ 0.85
TCF3-219ENST00000610756 CCR3P51677 355 aa20.33■□□□□ 0.85
TCF3-219ENST00000610756 GCNT1Q02742 428 aa20.33■□□□□ 0.85
TCF3-219ENST00000610756 PPP2R5DQ14738 602 aa20.33■□□□□ 0.85
TCF3-219ENST00000610756 RAB41Q5JT25 222 aa20.33■□□□□ 0.85
TCF3-219ENST00000610756 KLHDC10Q6PID8 442 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms