RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TNK2Q07912 1038 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 RUNX3Q13761 415 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PDGFRLQ15198 375 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CAMK4Q16566 473 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CCDC40Q4G0X9 1142 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CBWD6Q4V339 395 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 DCAF17Q5H9S7 520 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CBWD3Q5JTY5 395 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CBWD5Q5RIA9 395 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 C6orf132Q5T0Z8 1188 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TTI2Q6NXR4 508 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PDZD8Q8NEN9 1154 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SCAMP5Q8TAC9 235 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TTC8Q8TAM2 541 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 WHAMMQ8TF30 809 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 OVCA2Q8WZ82 227 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FBXO32Q969P5 355 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SLC35C1Q96A29 364 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 HEXIM2Q96MH2 286 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TWNKQ96RR1 684 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PHOX2BQ99453 314 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SMOQ99835 787 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 RNF38Q9H0F5 515 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CSNK1G1Q9HCP0 422 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 DMAP1Q9NPF5 467 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FAM86C1Q9NVL1 165 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SPATA6Q9NWH7 488 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 HMGXB4Q9UGU5 601 aa10.31□□□□□ -0.76
TNFRSF1A-214ENST00000543048 DMDP11532 3685 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 VPS13AQ96RL7 3174 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PROB1E7EW31 1015 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SPECC1L-ADORA2AF8WAN1 911 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TK2O00142 265 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PMM2O15305 246 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 LAMTOR5O43504 91 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 BEST1O76090 585 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 GNA14O95837 355 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FAM200BP0CF97 657 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CHRNB1P11230 501 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TCF3P15923 654 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ADORA2BP29275 332 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CTHP32929 405 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 NBL1P41271 181 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SOX9P48436 509 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 STX17P56962 302 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MAP3K7CLP57077 242 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SLC7A9P82251 487 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CETN1Q12798 172 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 IFRD2Q12894 506 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TSR1Q2NL82 804 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SNX30Q5VWJ9 437 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ZMIZ2Q8NF64 920 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SH3RF2Q8TEC5 729 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 OSCP1Q8WVF1 389 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TMEM176AQ96HP8 235 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SRRTQ9BXP5 876 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 DUSP16Q9BY84 665 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FBXO44Q9H4M3 255 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 EBF3Q9H4W6 596 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 KRT82Q9NSB4 513 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CISHQ9NSE2 258 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FAM49BQ9NUQ9 324 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 DUS2Q9NX74 493 aaKnown RBP10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ARHGAP26Q9UNA1 814 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CTNND2Q9UQB3 1225 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FAM186AA6NE01 2351 aa10.3□□□□□ -0.76
TNFRSF1A-214ENST00000543048 RALGAPA1Q6GYQ0 2036 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 USP34Q70CQ2 3546 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FAM92AA1XBS5 289 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 GOLGA6L22H0YM25 854 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 LEFTY2O00292 366 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 P4HA2O15460 535 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 OAS1P00973 400 aaKnown RBP10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ZDHHC11BP0C7U3 371 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SP9P0CG40 484 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 IFNAR2P48551 515 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FMO5P49326 533 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SLC5A3P53794 718 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 YWHAEP62258 255 aaKnown RBP10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 NR1H3Q13133 447 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PAK1Q13153 545 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 LRRC32Q14392 662 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MTF1Q14872 753 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ZNF77Q15935 545 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ZNF528Q3MIS6 628 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ZNF394Q53GI3 561 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 DGKKQ5KSL6 1271 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 HECTD3Q5T447 861 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PPP1R26Q5T8A7 1209 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TRIM68Q6AZZ1 485 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MAML2Q8IZL2 1156 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SYNPOQ8N3V7 929 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 KIAA1958Q8N8K9 716 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SLC4A11Q8NBS3 891 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TTC16Q8NEE8 873 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 RIN3Q8TB24 985 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 IER2Q9BTL4 223 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 UBXN6Q9BZV1 441 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 LINC00597Q9H2U6 94 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CHRDQ9H2X0 955 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms