RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CHGBP05060 677 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 HEXBP07686 556 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 SNRPAP09012 282 aaKnown RBP7.86□□□□□ -1.15
HDAC3-216ENST00000523088 ACTN1P12814 892 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 CYP3A7P24462 503 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 IDUAP35475 653 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 MAPK9P45984 424 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 RPIAP49247 311 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 TMED10P49755 219 aaKnown RBP7.86□□□□□ -1.15
HDAC3-216ENST00000523088 CHMP4BP1P59074 171 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 MYL6P60660 151 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 USP46P62068 366 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 APOBRQ0VD83 1088 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 SMAD4Q13485 552 aaKnown RBP7.86□□□□□ -1.15
HDAC3-216ENST00000523088 CUL2Q13617 745 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 COTL1Q14019 142 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 ELOAQ14241 798 aaKnown RBP7.86□□□□□ -1.15
HDAC3-216ENST00000523088 HIC1Q14526 733 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 MLC1Q15049 377 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 TSC22D1Q15714 1073 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 LRIT3Q3SXY7 679 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 ODF2Q5BJF6 829 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 SPDYAQ5MJ70 313 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 CLVS2Q5SYC1 327 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 SYDE2Q5VT97 1194 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 FYB2Q5VWT5 728 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 XKR5Q6UX68 686 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 MAMDC4Q6UXC1 1216 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 ZYG11AQ6WRX3 759 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 BNC2Q6ZN30 1099 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-216ENST00000523088 CHD1LQ86WJ1 897 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 NRSN1Q8IZ57 195 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 EHBP1Q8NDI1 1231 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 ZNF680Q8NEM1 530 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 GRK7Q8WTQ7 553 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 NLRP7Q8WX94 980 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 SEPT1Q8WYJ6 367 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 AZIN2Q96A70 460 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 TTC17Q96AE7 1141 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 FGD4Q96M96 766 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 CMTM3Q96MX0 182 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 TSNARE1Q96NA8 513 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 HAPLN3Q96S86 360 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 LBHD1Q9BQE6 289 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-216ENST00000523088 SIKE1Q9BRV8 207 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 UNKQ9C0B0 810 aaKnown RBP7.86□□□□□ -1.15
HDAC3-216ENST00000523088 CCSER1Q9C0I3 900 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 LSG1Q9H089 658 aaKnown RBP7.86□□□□□ -1.15
HDAC3-216ENST00000523088 NTN4Q9HB63 628 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 TRPC7Q9HCX4 862 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 TM9SF3Q9HD45 589 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 SLC40A1Q9NP59 571 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 FBXO28Q9NVF7 368 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 MRPL39Q9NYK5 338 aaKnown RBP7.86□□□□□ -1.15
HDAC3-216ENST00000523088 KCNN3Q9UGI6 736 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 AGAP1Q9UPQ3 857 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 DNAJC16Q9Y2G8 782 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 SSUH2Q9Y2M2 353 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 TRPV2Q9Y5S1 764 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 LTBP2Q14767 1821 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 MROH7Q68CQ1 1323 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 DNAJC25-GNG10A0A024R161 153 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-216ENST00000523088 A0A0B4J269 797 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 PVALEFA0A1B0GWK0 134 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 SERTM1A2A2V5 107 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 MOXD2PA6NHM9 499 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 NDUFS8O00217 210 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 PIK3CDO00329 1044 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 BET1O15155 118 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 RAD51BO15315 384 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 RIPK2O43353 540 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 AKAP10O43572 662 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 PRDM1O75626 825 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 KLHL18O94889 574 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 CRYZL1O95825 349 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 F13A1P00488 732 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 ASGR1P07306 291 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 ABCB1P08183 1280 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-216ENST00000523088 NOVP48745 357 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 TKTL1P51854 596 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 ARFIP1P53367 373 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 SRP54P61011 504 aaKnown RBP7.85□□□□□ -1.15
HDAC3-216ENST00000523088 TSPAN5P62079 268 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 CENPCQ03188 943 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 ENPEPQ07075 957 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 LGALS3BPQ08380 585 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 SCRN3Q0VDG4 424 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 CSTF3Q12996 717 aaKnown RBP7.85□□□□□ -1.15
HDAC3-216ENST00000523088 STK4Q13043 487 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 KCNAB2Q13303 367 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 LSAMPQ13449 338 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 DOC2AQ14183 400 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 PTK2BQ14289 1009 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 SNX17Q15036 470 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 AAGABQ6PD74 315 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 HDXQ7Z353 690 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 HOMER1Q86YM7 354 aa7.85□□□□□ -1.15
HDAC3-216ENST00000523088 CLVS1Q8IUQ0 354 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-216ENST00000523088 TDHQ8IZJ6 230 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms