RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 SLC35F5Q8WV83 523 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 ZNF606Q8WXB4 792 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 DNASE1L2Q92874 299 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 HSFY1Q96LI6 401 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 CDK5RAP1Q96SZ6 601 aaKnown RBP11.68□□□□□ -0.54
CPSF7-212ENST00000489728 SLC46A2Q9BY10 475 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 TDP1Q9NUW8 608 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 CLIC5Q9NZA1 410 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 MYO6Q9UM54 1294 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 PCDHGC3Q9UN70 934 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 ARHGAP26Q9UNA1 814 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 HELZP42694 1942 aaKnown RBP11.68□□□□□ -0.54
CPSF7-212ENST00000489728 MYO16Q9Y6X6 1858 aa11.68□□□□□ -0.54
CPSF7-212ENST00000489728 M0QYV0 167 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 FOXN3O00409 490 aaPredicted RBP11.67□□□□□ -0.54
CPSF7-212ENST00000489728 DPYSL4O14531 572 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 THAP12O43422 761 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 FBXO21O94952 628 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 SERPINC1P01008 464 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 CKMP06732 381 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 ACADSBP45954 432 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 RPL34P49207 117 aaKnown RBP11.67□□□□□ -0.54
CPSF7-212ENST00000489728 MLLT6P55198 1093 aaPredicted RBP11.67□□□□□ -0.54
CPSF7-212ENST00000489728 JAM2P57087 298 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 SLC7A9P82251 487 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 APBA1Q02410 837 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 HECTD3Q5T447 861 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 TXNDC8Q6A555 127 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 PM20D1Q6GTS8 502 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 TANGO2Q6ICL3 276 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 GPRIN1Q7Z2K8 1008 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 ZNF677Q86XU0 584 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 MAB21L3Q8N8X9 362 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 RSAD2Q8WXG1 361 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 IRGQQ8WZA9 623 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 KHSRPQ92945 711 aaKnown RBP eCLIP11.67□□□□□ -0.54
CPSF7-212ENST00000489728 IQCDQ96DY2 449 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 KXD1Q9BQD3 176 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 ZSWIM1Q9BR11 485 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 TRMT61BQ9BVS5 477 aaKnown RBP11.67□□□□□ -0.54
CPSF7-212ENST00000489728 C1QTNF1Q9BXJ1 281 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 LHX5Q9H2C1 402 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 LRRC4Q9HBW1 653 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 CNGB3Q9NQW8 809 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 FAM207AQ9NSI2 230 aaPredicted RBP11.67□□□□□ -0.54
CPSF7-212ENST00000489728 THG1LQ9NWX6 298 aaKnown RBP11.67□□□□□ -0.54
CPSF7-212ENST00000489728 WNT16Q9UBV4 365 aa11.67□□□□□ -0.54
CPSF7-212ENST00000489728 AJAP1Q9UKB5 411 aaPredicted RBP11.67□□□□□ -0.54
CPSF7-212ENST00000489728 C2orf78A6NCI8 922 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 HEPACAM2A8MVW5 462 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 CHADO15335 359 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 CYP26A1O43174 497 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 SART1O43290 800 aaKnown RBP11.66□□□□□ -0.54
CPSF7-212ENST00000489728 PRAMEF12O95522 483 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 LSM8O95777 96 aaKnown RBP11.66□□□□□ -0.54
CPSF7-212ENST00000489728 ZBED1O96006 694 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 TPM3P06753 285 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 HDCP19113 662 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 CLCN1P35523 988 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 USP8P40818 1118 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 GPD2P43304 727 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 TKTL1P51854 596 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 SNX16P57768 344 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 POLR2FP61218 127 aaKnown RBP11.66□□□□□ -0.54
CPSF7-212ENST00000489728 IFRD2Q12894 506 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-212ENST00000489728 USP4Q13107 963 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 ARHGAP29Q52LW3 1261 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 FIGNQ5HY92 759 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 VITQ6UXI7 678 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 TRIM67Q6ZTA4 783 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 BMP8AQ7Z5Y6 402 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 YAF2Q8IY57 180 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 SIX6OS1Q8N1H7 587 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 BPIFB1Q8TDL5 484 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 IRF7Q92985 503 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 USP13Q92995 863 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-212ENST00000489728 SECISBP2LQ93073 1101 aaKnown RBP11.66□□□□□ -0.54
CPSF7-212ENST00000489728 MSANTD3Q96H12 275 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 PCMTD1Q96MG8 357 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-212ENST00000489728 NOX5Q96PH1 765 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 SPAG5Q96R06 1193 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 TRIM62Q9BVG3 475 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 EDEM3Q9BZQ6 932 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 TRPC7Q9HCX4 862 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 GMIPQ9P107 970 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 CEP83Q9Y592 693 aa11.66□□□□□ -0.54
CPSF7-212ENST00000489728 MYO10Q9HD67 2058 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 ZNF263O14978 683 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 TLR5O60602 858 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 GPR37L1O60883 481 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 CCDC172P0C7W6 258 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 RALAP11233 206 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 GLULP15104 373 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 CYP11B1P15538 503 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 KRT9P35527 623 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 SOX5P35711 763 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 VIPR2P41587 438 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 STAT1P42224 750 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 FANCCQ00597 558 aa11.65□□□□□ -0.54
CPSF7-212ENST00000489728 NR1I3Q14994 352 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms