RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ZSCAN32Q9NX65 697 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 SMPD4Q9NXE4 827 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 GMIPQ9P107 970 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 ARMCX3Q9UH62 379 aaPredicted RBP10.77□□□□□ -0.69
SF3A3-204ENST00000462258 CTNND2Q9UQB3 1225 aa10.77□□□□□ -0.69
SF3A3-204ENST00000462258 FAM92AA1XBS5 289 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 BIN1O00499 593 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 BMP6P22004 513 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 GJA4P35212 333 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 TUBP50607 506 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 GRSF1Q12849 480 aaKnown RBP eCLIP10.76□□□□□ -0.69
SF3A3-204ENST00000462258 MORC3Q14149 939 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 CCDC40Q4G0X9 1142 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 ZNF394Q53GI3 561 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 TMEM196Q5HYL7 178 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 HECTD3Q5T447 861 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 FSTL4Q6MZW2 842 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 MAMSTRQ6ZN01 415 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 GPRIN1Q7Z2K8 1008 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 FILIP1Q7Z7B0 1213 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 DDX42Q86XP3 938 aaKnown RBP eCLIP10.76□□□□□ -0.69
SF3A3-204ENST00000462258 SYNPOQ8N3V7 929 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 SPEM1Q8N4L4 309 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 TTC39CQ8N584 583 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 WHAMMQ8TF30 809 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 NELFBQ8WX92 580 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 ATRIPQ8WXE1 791 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 NELL1Q92832 810 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 EXOC4Q96A65 974 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 CYFIP2Q96F07 1278 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 CEP63Q96MT8 703 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 HNRNPABQ99729 332 aaKnown RBP10.76□□□□□ -0.69
SF3A3-204ENST00000462258 FAM126AQ9BYI3 521 aaPredicted RBP10.76□□□□□ -0.69
SF3A3-204ENST00000462258 RNF38Q9H0F5 515 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 FBXO44Q9H4M3 255 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 FAM124BQ9H5Z6 455 aaPredicted RBP10.76□□□□□ -0.69
SF3A3-204ENST00000462258 CCSER2Q9H7U1 834 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 METTL14Q9HCE5 456 aaKnown RBP10.76□□□□□ -0.69
SF3A3-204ENST00000462258 PNPLA8Q9NP80 782 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 CISHQ9NSE2 258 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 COMMD8Q9NX08 183 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 IL37Q9NZH6 218 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 CHMP5Q9NZZ3 219 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 OTOGLQ3ZCN5 2332 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 ZNF292O60281 2723 aa10.76□□□□□ -0.69
SF3A3-204ENST00000462258 BICDL2A1A5D9 508 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 TRDMT1O14717 391 aaKnown RBP10.75□□□□□ -0.69
SF3A3-204ENST00000462258 SCAMP3O14828 347 aaKnown RBP10.75□□□□□ -0.69
SF3A3-204ENST00000462258 CYP26A1O43174 497 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 COCHO43405 550 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 RNF40O75150 1001 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 PAPSS2O95340 614 aaPredicted RBP10.75□□□□□ -0.69
SF3A3-204ENST00000462258 EGFP01133 1207 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 CYP17A1P05093 508 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 ZDHHC11BP0C7U3 371 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 CXCL12P48061 93 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 NRLP54845 237 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 UBE2HP62256 183 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 PAK1Q13153 545 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 CUL2Q13617 745 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 PPP1R26Q5T8A7 1209 aaPredicted RBP10.75□□□□□ -0.69
SF3A3-204ENST00000462258 SNX30Q5VWJ9 437 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 NAIF1Q69YI7 327 aaPredicted RBP10.75□□□□□ -0.69
SF3A3-204ENST00000462258 TTI2Q6NXR4 508 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 KIAA1958Q8N8K9 716 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 CD101Q93033 1021 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 ZFRQ96KR1 1074 aaKnown RBP10.75□□□□□ -0.69
SF3A3-204ENST00000462258 P2RY13Q9BPV8 354 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 HINFPQ9BQA5 517 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 NACA2Q9H009 215 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 TLR8Q9NR97 1041 aaKnown RBP10.75□□□□□ -0.69
SF3A3-204ENST00000462258 CFAP97Q9P2B7 532 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 SMG5Q9UPR3 1016 aaKnown RBP10.75□□□□□ -0.69
SF3A3-204ENST00000462258 COQ4Q9Y3A0 265 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 FRYLO94915 3013 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 ATG2BQ96BY7 2078 aa10.75□□□□□ -0.69
SF3A3-204ENST00000462258 EML5Q05BV3 1969 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 MYOFQ9NZM1 2061 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 HHLA1C9JL84 531 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 SLC9A3R1O14745 358 aaPredicted RBP10.74□□□□□ -0.69
SF3A3-204ENST00000462258 TLR5O60602 858 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 LILRB5O75023 590 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 ACO1P21399 889 aaKnown RBP10.74□□□□□ -0.69
SF3A3-204ENST00000462258 DRD1P21728 446 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 ANP32AP39687 249 aaKnown RBP10.74□□□□□ -0.69
SF3A3-204ENST00000462258 FMO5P49326 533 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 RAD23BP54727 409 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 YWHAEP62258 255 aaKnown RBP10.74□□□□□ -0.69
SF3A3-204ENST00000462258 NR1H3Q13133 447 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 PKN3Q6P5Z2 889 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 FOXR2Q6PJQ5 311 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 SLC4A11Q8NBS3 891 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 TATDN2Q93075 761 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 TMEM176AQ96HP8 235 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 DUSP9Q99956 384 aaKnown RBP10.74□□□□□ -0.69
SF3A3-204ENST00000462258 EPC1Q9H2F5 836 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 LINC00597Q9H2U6 94 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 C2orf42Q9NWW7 574 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 CHORDC1Q9UHD1 332 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms