RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 KDM3AQ9Y4C1 1321 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 LOXHD1Q8IVV2 1947 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 MYH11P35749 1972 aa5.62□□□□□ -1.51
HMGB1P4-201ENST00000455362 FAM170AA1A519 330 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 LRRC37A2A6NM11 1700 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 ZNF561-AS1K7EIQ3 104 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 KCNK3O14649 394 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 TM4SF5O14894 197 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 KLRC4O43908 158 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 LYPLA2O95372 231 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 CYP17A1P05093 508 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 HOXC6P09630 235 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 CLEC2LP0C7M8 214 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 XRCC6P12956 609 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 IFNGR1P15260 489 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 PAMP19021 973 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 PTX3P26022 381 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 SFNP31947 248 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 MAP2K2P36507 400 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 QARSP47897 775 aaKnown RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 MRE11P49959 708 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 JAK3P52333 1124 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 SLC12A3P55017 1021 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 NAP1L1P55209 391 aaKnown RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 BCAR1P56945 870 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 JAM2P57087 298 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 CYP4A11Q02928 519 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 IQCB1Q15051 598 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 UVSSAQ2YD98 709 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 DPCR1Q3MIW9 517 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 PAN2Q504Q3 1202 aaKnown RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 MBNL2Q5VZF2 373 aaKnown RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 SWSAP1Q6NVH7 229 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 HIBCHQ6NVY1 386 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 CCDC62Q6P9F0 684 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 KCNV1Q6PIU1 500 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 CRTC3Q6UUV7 619 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 MAMDC4Q6UXC1 1216 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 ABHD15Q6UXT9 468 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 C1orf229Q6ZS94 237 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 C11orf57Q6ZUT1 292 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 ARMCX2Q7L311 632 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 SYT2Q8N9I0 419 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 TRIML1Q8N9V2 468 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 MLKLQ8NB16 471 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 NEK9Q8TD19 979 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 PIGOQ8TEQ8 1089 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 LARP4BQ92615 738 aaKnown RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 USP6NLQ92738 828 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 DNAJC19Q96DA6 116 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 APIPQ96GX9 242 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 MAML3Q96JK9 1138 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 NACC1Q96RE7 527 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 BARD1Q99728 777 aaKnown RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 YIPF2Q9BWQ6 316 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 TTLL2Q9BWV7 592 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 TRIM9Q9C026 710 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 NAT10Q9H0A0 1025 aaKnown RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 GRPEL1Q9HAV7 217 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 SMURF1Q9HCE7 757 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 PNPLA8Q9NP80 782 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 IRAK4Q9NWZ3 460 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 LRFN1Q9P244 771 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 USP36Q9P275 1121 aaKnown RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 WRAP73Q9P2S5 460 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 SLC9A2Q9UBY0 812 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 TELO2Q9Y4R8 837 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 PCDHA10Q9Y5I2 948 aa5.61□□□□□ -1.51
HMGB1P4-201ENST00000455362 KAT6AQ92794 2004 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 ZNF236Q9UL36 1845 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 TRBV23OR9-2A0A075B6M9 112 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 NPHP3-ACAD11A0A0J9YXS1 232 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 PVALEFA0A1B0GWK0 134 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 GSTTP1A0A1W2PQM5 241 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 KRBA1A5PL33 1030 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 SCDO00767 359 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 LRRN2O75325 713 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 DEAF1O75398 565 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 FGF18O76093 207 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 STBD1O95210 358 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 ARIH2O95376 493 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 SNAI1O95863 264 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 GNAT1P11488 350 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 NID1P14543 1247 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 CYP11B2P19099 503 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 UBA1P22314 1058 aaKnown RBP5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 CTGFP29279 349 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 KRT20P35900 424 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 RAD52P43351 418 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 CLNS1AP54105 237 aaKnown RBP5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 ACTR2P61160 394 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 PSMC5P62195 406 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 ASIC1P78348 528 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 LSAMPQ13449 338 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 PMS2P11Q13670 270 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 NEDD9Q14511 834 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 KCNB1Q14721 858 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 SNX17Q15036 470 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 TAF5Q15542 800 aa5.6□□□□□ -1.51
HMGB1P4-201ENST00000455362 TAF11Q15544 211 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms