RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 ZC3H7BQ9UGR2 993 aaKnown RBP10.09□□□□□ -0.79
GABPA-201ENST00000354828 XPO7Q9UIA9 1087 aaKnown RBP10.09□□□□□ -0.79
GABPA-201ENST00000354828 STK38LQ9Y2H1 464 aa10.09□□□□□ -0.79
GABPA-201ENST00000354828 SLC45A1Q9Y2W3 748 aa10.09□□□□□ -0.79
GABPA-201ENST00000354828 HEATR9A2RTY3 570 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 KCNA2P16389 499 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 PBLDP30039 288 aaPredicted RBP10.08□□□□□ -0.8
GABPA-201ENST00000354828 TUBP50607 506 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 CENPPQ6IPU0 288 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 ABHD15Q6UXT9 468 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 CRLF3Q8IUI8 442 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 SCUBE3Q8IX30 993 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 FAM71DQ8N9W8 422 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 ZNF606Q8WXB4 792 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 ULBP1Q9BZM6 244 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 NT5MQ9NPB1 228 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 AMACRQ9UHK6 382 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 A0A1W2PQJ5 194 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 ESYT3A0FGR9 886 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 TXNDC9O14530 226 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 MICAL2O94851 1124 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 HIRAP54198 1017 aaPredicted RBP10.08□□□□□ -0.8
GABPA-201ENST00000354828 VCPP55072 806 aaKnown RBP10.08□□□□□ -0.8
GABPA-201ENST00000354828 PLCL1Q15111 1095 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 ANO5Q75V66 913 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 PDZD8Q8NEN9 1154 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 TSPAN17Q96FV3 270 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 BTBD6Q96KE9 485 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 MRPL42Q9Y6G3 142 aaKnown RBP10.08□□□□□ -0.8
GABPA-201ENST00000354828 LRRIQ3A6PVS8 624 aaPredicted RBP10.08□□□□□ -0.8
GABPA-201ENST00000354828 KIF3CO14782 793 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 SUN1O94901 812 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 ARF4P18085 180 aaPredicted RBP10.08□□□□□ -0.8
GABPA-201ENST00000354828 USP10Q14694 798 aaKnown RBP10.08□□□□□ -0.8
GABPA-201ENST00000354828 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.08□□□□□ -0.8
GABPA-201ENST00000354828 EEF1DP3Q658K8 133 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 TTI2Q6NXR4 508 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 LINC00523Q86TU6 105 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 ZNF557Q8N988 423 aaPredicted RBP10.08□□□□□ -0.8
GABPA-201ENST00000354828 UBE2Q2Q8WVN8 375 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 OMDQ99983 421 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 MIR1-1HGQ9H1L0 117 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 BLOC1S4Q9NUP1 217 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 CDH9Q9ULB4 789 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 RRM1P23921 792 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 PTK7Q13308 1070 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 ART3Q13508 389 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 DHX34Q14147 1143 aaKnown RBP10.08□□□□□ -0.8
GABPA-201ENST00000354828 PDK2Q15119 407 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 CCDC85BQ15834 202 aaPredicted RBP10.08□□□□□ -0.8
GABPA-201ENST00000354828 SAPCD2Q86UD0 394 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 ENGASEQ8NFI3 743 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 MED4Q9NPJ6 270 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 PCDHGB4Q9UN71 923 aa10.08□□□□□ -0.8
GABPA-201ENST00000354828 ARVCFO00192 962 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 JCHAINP01591 159 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 GABRR2P28476 465 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 HMOX2P30519 316 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 NCAPHQ15003 741 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 DDIASQ8IXT1 998 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 DEFB106AQ8N104 65 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 SYN2Q92777 582 aaPredicted RBP10.07□□□□□ -0.8
GABPA-201ENST00000354828 CELF6Q96J87 481 aaKnown RBP10.07□□□□□ -0.8
GABPA-201ENST00000354828 SMYD3Q9H7B4 428 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 SLC39A10Q9ULF5 831 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 PCDHA2Q9Y5H9 948 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 ALS2Q96Q42 1657 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 PHF20L1A8MW92 1017 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 CFLARO15519 480 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 RHOBTB1O94844 696 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 LTFP02788 710 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 ATP1A1P05023 1023 aaKnown RBP10.07□□□□□ -0.8
GABPA-201ENST00000354828 PAX3P23760 479 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 CCND3P30281 292 aaPredicted RBP10.07□□□□□ -0.8
GABPA-201ENST00000354828 PPP3CCP48454 512 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 PMS2P54278 862 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 MTM1Q13496 603 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 TBCCQ15814 346 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 SDHAF4Q5VUM1 108 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 NUGGCQ68CJ6 796 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 WDR75Q8IWA0 830 aaKnown RBP10.07□□□□□ -0.8
GABPA-201ENST00000354828 SNX31Q8N9S9 440 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 KIAA0895Q8NCT3 520 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 RGS17Q9UGC6 210 aaPredicted RBP10.07□□□□□ -0.8
GABPA-201ENST00000354828 COL16A1Q07092 1604 aaPredicted RBP10.07□□□□□ -0.8
GABPA-201ENST00000354828 CCDC195A0A1B0GUA6 201 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 GRM5P41594 1212 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 ARHGAP25P42331 645 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 WASHC5Q12768 1159 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 MFSD4BQ5TF39 518 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 TSHZ1Q6ZSZ6 1077 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 TMEM161BQ8NDZ6 487 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 ADGRE3Q9BY15 652 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 UNC93B1Q9H1C4 597 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.07□□□□□ -0.8
GABPA-201ENST00000354828 ABCC13Q9NSE7 274 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 DNMT3LQ9UJW3 386 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 USP18Q9UMW8 372 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 TRAF3IP3Q9Y228 551 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms