RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 KRE1P17260 313 aa1.44□□□□□ -2.18
snR43snR43 NTF2P33331 125 aaKnown RBP1.44□□□□□ -2.18
snR43snR43 DAD2P36162 133 aa1.44□□□□□ -2.18
snR43snR43 ABF2Q02486 183 aa1.44□□□□□ -2.18
snR43snR43 RPS22BQ3E7Y3 130 aaKnown RBP1.44□□□□□ -2.18
snR43snR43 YPR014CQ6B0W2 109 aa1.44□□□□□ -2.18
snR43snR43 RPL29P05747 59 aaPredicted RBP1.43□□□□□ -2.18
snR43snR43 HMRA2P0CY13 119 aa1.43□□□□□ -2.18
snR43snR43 ATP15P21306 62 aa1.43□□□□□ -2.18
snR43snR43 SHU1P38751 150 aa1.43□□□□□ -2.18
snR43snR43 ATP14Q12349 124 aa1.43□□□□□ -2.18
snR43snR43 WIP1Q2V2P8 89 aa1.43□□□□□ -2.18
snR43snR43 YCR024C-BQ3E7Z8 88 aa1.43□□□□□ -2.18
snR43snR43 SRB6P32570 121 aa1.42□□□□□ -2.18
snR43snR43 MRPL24P36525 258 aaPredicted RBP1.42□□□□□ -2.18
snR43snR43 ERV14P53173 138 aa1.42□□□□□ -2.18
snR43snR43 YNL190WP53872 204 aa1.42□□□□□ -2.18
snR43snR43 ATP16Q12165 160 aa1.42□□□□□ -2.18
snR43snR43 FMP16Q12497 93 aa1.42□□□□□ -2.18
snR43snR43 QCR8P08525 94 aa1.41□□□□□ -2.18
snR43snR43 HAP3P13434 144 aa1.41□□□□□ -2.18
snR43snR43 SPT4P32914 102 aaPredicted RBP1.41□□□□□ -2.18
snR43snR43 YFR057WP43625 151 aa1.41□□□□□ -2.18
snR43snR43 DDR2P89113 61 aa1.41□□□□□ -2.18
snR43snR43 GSP1P32835 219 aaKnown RBP1.4□□□□□ -2.19
snR43snR43 PEX17P40155 199 aa1.4□□□□□ -2.19
snR43snR43 AIM11P87275 137 aa1.4□□□□□ -2.19
snR43snR43 YPL257WQ08974 193 aa1.4□□□□□ -2.19
snR43snR43 YAL063C-AQ3E791 96 aa1.4□□□□□ -2.19
snR43snR43 YNL042W-BQ3E7Z2 85 aa1.4□□□□□ -2.19
snR43snR43 YLL006W-AQ3E814 58 aa1.4□□□□□ -2.19
snR43snR43 RPL27BP0C2H7 136 aaKnown RBP1.39□□□□□ -2.19
snR43snR43 COX10P21592 462 aa1.39□□□□□ -2.19
snR43snR43 YHL018WP38744 120 aaPredicted RBP1.39□□□□□ -2.19
snR43snR43 YGL118CP53132 145 aa1.39□□□□□ -2.19
snR43snR43 MRPS12P53732 153 aa1.39□□□□□ -2.19
snR43snR43 YNL122CP53921 115 aaPredicted RBP1.39□□□□□ -2.19
snR43snR43 YML079WQ03629 201 aa1.39□□□□□ -2.19
snR43snR43 YDL012CQ12489 107 aa1.39□□□□□ -2.19
snR43snR43 HTL1Q9URQ5 78 aa1.39□□□□□ -2.19
snR43snR43 YDL022C-AP0C5L6 82 aa1.38□□□□□ -2.19
snR43snR43 RPL18AP0CX49 186 aaKnown RBP1.38□□□□□ -2.19
snR43snR43 RPL18BP0CX50 186 aaKnown RBP1.38□□□□□ -2.19
snR43snR43 ATG8P38182 117 aaRIP-Chip data1.38□□□□□ -2.19not detected
snR43snR43 YPL073CP40323 161 aa1.38□□□□□ -2.19
snR43snR43 VMA21P41806 77 aa1.38□□□□□ -2.19
snR43snR43 YMR103CQ04436 120 aa1.38□□□□□ -2.19
snR43snR43 RPL26AP05743 127 aaKnown RBP1.37□□□□□ -2.19
snR43snR43 GSP2P32836 220 aaKnown RBP1.37□□□□□ -2.19
snR43snR43 MRPL11P36521 249 aaPredicted RBP1.37□□□□□ -2.19
snR43snR43 YBR027CP38220 110 aa1.37□□□□□ -2.19
snR43snR43 YHL005CP38752 130 aa1.37□□□□□ -2.19
snR43snR43 RPL26BP53221 127 aaKnown RBP1.37□□□□□ -2.19
snR43snR43 HPA2Q06592 156 aa1.37□□□□□ -2.19
snR43snR43 YBR230W-AQ3E762 66 aa1.37□□□□□ -2.19
snR43snR43 YOR020W-AQ3E824 90 aa1.37□□□□□ -2.19
snR43snR43 UGX2P32772 223 aa1.36□□□□□ -2.19
snR43snR43 YKR041WP36134 250 aa1.36□□□□□ -2.19
snR43snR43 POP3P53833 195 aaPredicted RBP1.36□□□□□ -2.19
snR43snR43 BSC4P53841 131 aa1.36□□□□□ -2.19
snR43snR43 CYT2Q00873 224 aa1.36□□□□□ -2.19
snR43snR43 YJL127C-BQ3E828 52 aa1.36□□□□□ -2.19
snR43snR43 FYV5P25585 152 aa1.35□□□□□ -2.19
snR43snR43 ICY1Q04329 127 aa1.35□□□□□ -2.19
snR43snR43 YOR072WQ08486 104 aa1.35□□□□□ -2.19
snR43snR43 YPL261CQ08976 102 aa1.35□□□□□ -2.19
snR43snR43 YLR236CA0A023PZG4 107 aa1.34□□□□□ -2.19
snR43snR43 RPL28P02406 149 aaKnown RBP1.34□□□□□ -2.19
snR43snR43 COX7P10174 60 aa1.34□□□□□ -2.19
snR43snR43 FYV4P38783 130 aaPredicted RBP1.34□□□□□ -2.19
snR43snR43 YEL067CP39978 195 aa1.34□□□□□ -2.19
snR43snR43 RGM1Q00453 211 aa1.34□□□□□ -2.19
snR43snR43 IRC21Q04772 201 aa1.34□□□□□ -2.19
snR43snR43 YHR007C-AQ07074 71 aa1.34□□□□□ -2.19
snR43snR43 YER134CP40081 178 aa1.33□□□□□ -2.2
snR43snR43 HHO1P53551 258 aa1.33□□□□□ -2.2
snR43snR43 PAU17Q12370 124 aa1.33□□□□□ -2.2
snR43snR43 RPL36BO14455 100 aaKnown RBP1.32□□□□□ -2.2
snR43snR43 ATP5P09457 212 aa1.32□□□□□ -2.2
snR43snR43 MSA2P36157 363 aa1.32□□□□□ -2.2
snR43snR43 YNL184CP53876 108 aa1.32□□□□□ -2.2
snR43snR43 FYV12Q08559 129 aa1.32□□□□□ -2.2
snR43snR43 IGO2Q9P305 131 aa1.32□□□□□ -2.2
snR43snR43 YIA6P40556 373 aa1.31□□□□□ -2.2
snR43snR43 SFT1P43682 97 aa1.31□□□□□ -2.2
snR43snR43 YNR077CP53758 84 aa1.31□□□□□ -2.2
snR43snR43 YLR050CQ12155 161 aaKnown RBP1.31□□□□□ -2.2
snR43snR43 Q0017Q9ZZX8 53 aa1.31□□□□□ -2.2
snR43snR43 BET1P22804 142 aa1.3□□□□□ -2.2
snR43snR43 MID2P36027 376 aa1.3□□□□□ -2.2
snR43snR43 YKL044WP36092 106 aa1.3□□□□□ -2.2
snR43snR43 NSE4P43124 402 aa1.3□□□□□ -2.2
snR43snR43 ARL3Q02804 198 aa1.3□□□□□ -2.2
snR43snR43 YDR210WQ03482 75 aa1.3□□□□□ -2.2
snR43snR43 YHR139C-AO13536 103 aa1.29□□□□□ -2.2
snR43snR43 ZEO1Q08245 113 aa1.29□□□□□ -2.2
snR43snR43 YOL097W-AQ3E7Y9 61 aa1.29□□□□□ -2.2
snR43snR43 YLR157W-DP0CE99 70 aa1.28□□□□□ -2.2
snR43snR43 FUN14P18411 198 aa1.28□□□□□ -2.2
snR43snR43 RSM18P40033 138 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms