RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W NRG2P38082 220 aa4□□□□□ -1.77
HFI1YPL254W YCR075W-AQ3E830 75 aa3.99□□□□□ -1.77
HFI1YPL254W COX10P21592 462 aa3.98□□□□□ -1.77
HFI1YPL254W RPB9P27999 122 aa3.98□□□□□ -1.77
HFI1YPL254W YHR130CP38834 111 aa3.98□□□□□ -1.77
HFI1YPL254W ALG13P53178 202 aa3.98□□□□□ -1.77
HFI1YPL254W PMP3P87284 55 aa3.98□□□□□ -1.77
HFI1YPL254W YMR295CQ03559 197 aa3.98□□□□□ -1.77
HFI1YPL254W YOR034C-AQ3E735 80 aa3.98□□□□□ -1.77
HFI1YPL254W RPL2AP0CX45 254 aaKnown RBP3.98□□□□□ -1.77
HFI1YPL254W RPL2BP0CX46 254 aaKnown RBP3.98□□□□□ -1.77
HFI1YPL254W RPS11AP0CX47 156 aaKnown RBP3.98□□□□□ -1.77
HFI1YPL254W RPS11BP0CX48 156 aaKnown RBP3.98□□□□□ -1.77
HFI1YPL254W UBC5P15732 148 aa3.98□□□□□ -1.77
HFI1YPL254W YBR219CP38317 127 aa3.98□□□□□ -1.77
HFI1YPL254W YAL063C-AQ3E791 96 aa3.98□□□□□ -1.77
HFI1YPL254W YHR212W-AP0CX91 67 aa3.97□□□□□ -1.77
HFI1YPL254W AIM19P40502 157 aa3.97□□□□□ -1.77
HFI1YPL254W YPS5P53057 165 aa3.97□□□□□ -1.77
HFI1YPL254W QCR8P08525 94 aa3.96□□□□□ -1.78
HFI1YPL254W RPL43AP0CX25 92 aaKnown RBP3.96□□□□□ -1.78
HFI1YPL254W RPL43BP0CX26 92 aa3.96□□□□□ -1.78
HFI1YPL254W ARC15P40518 154 aaRIP-Chip data3.96□□□□□ -1.78not detected
HFI1YPL254W YCH1P42937 148 aa3.96□□□□□ -1.78
HFI1YPL254W HUR1P45820 110 aa3.96□□□□□ -1.78
HFI1YPL254W MEC1P38111 2368 aa3.95□□□□□ -1.78
HFI1YPL254W YAR1P46683 200 aa3.95□□□□□ -1.78
HFI1YPL254W HAL1Q01766 294 aa3.95□□□□□ -1.78
HFI1YPL254W YBL112CQ3E7Y4 105 aa3.95□□□□□ -1.78
HFI1YPL254W KRE1P17260 313 aa3.94□□□□□ -1.78
HFI1YPL254W YCR001WP25347 104 aa3.94□□□□□ -1.78
HFI1YPL254W VAM10Q08474 114 aa3.94□□□□□ -1.78
HFI1YPL254W YLL006W-AQ3E814 58 aa3.94□□□□□ -1.78
HFI1YPL254W PBI2P0CT04 75 aaKnown RBP3.93□□□□□ -1.78
HFI1YPL254W TOA2P32774 122 aa3.93□□□□□ -1.78
HFI1YPL254W COX14P39103 70 aa3.93□□□□□ -1.78
HFI1YPL254W CWP2P43497 92 aa3.93□□□□□ -1.78
HFI1YPL254W SKI6P46948 246 aaPredicted RBP3.93□□□□□ -1.78
HFI1YPL254W RGM1Q00453 211 aa3.93□□□□□ -1.78
HFI1YPL254W MRPL24P36525 258 aaPredicted RBP3.92□□□□□ -1.78
HFI1YPL254W MPC2P38857 129 aa3.92□□□□□ -1.78
HFI1YPL254W SVP26P38869 228 aa3.92□□□□□ -1.78
HFI1YPL254W YFL041W-AQ3E817 63 aa3.92□□□□□ -1.78
HFI1YPL254W YCR085WP25650 117 aa3.92□□□□□ -1.78
HFI1YPL254W YEL045CP32616 141 aa3.92□□□□□ -1.78
HFI1YPL254W YDR381C-AQ3E6R5 114 aa3.92□□□□□ -1.78
HFI1YPL254W YHR139C-AO13536 103 aa3.9□□□□□ -1.79
HFI1YPL254W MSA2P36157 363 aa3.9□□□□□ -1.79
HFI1YPL254W YOR304C-AO14468 76 aa3.89□□□□□ -1.79
HFI1YPL254W YAR029WP39549 74 aa3.89□□□□□ -1.79
HFI1YPL254W YGR039WP53225 103 aa3.89□□□□□ -1.79
HFI1YPL254W YDR274CP87283 123 aa3.89□□□□□ -1.79
HFI1YPL254W YMR122W-AQ3E842 84 aa3.89□□□□□ -1.79
HFI1YPL254W YDR119W-AQ2V2P9 66 aa3.88□□□□□ -1.79
HFI1YPL254W YOR020W-AQ3E824 90 aa3.88□□□□□ -1.79
HFI1YPL254W YAL065CO13511 128 aa3.87□□□□□ -1.79
HFI1YPL254W SMP1P38128 452 aa3.87□□□□□ -1.79
HFI1YPL254W KNH1P50112 268 aa3.87□□□□□ -1.79
HFI1YPL254W MPC3P53311 146 aa3.87□□□□□ -1.79
HFI1YPL254W IRC21Q04772 201 aa3.87□□□□□ -1.79
HFI1YPL254W YGR240C-AQ3E786 66 aa3.87□□□□□ -1.79
HFI1YPL254W YLR236CA0A023PZG4 107 aa3.86□□□□□ -1.79
HFI1YPL254W RAD6P06104 172 aa3.86□□□□□ -1.79
HFI1YPL254W COX12Q01519 83 aa3.86□□□□□ -1.79
HFI1YPL254W YPL080CQ02826 108 aa3.86□□□□□ -1.79
HFI1YPL254W EDC1P53080 175 aaPredicted RBP3.86□□□□□ -1.79
HFI1YPL254W ENV10Q99382 181 aa3.86□□□□□ -1.79
HFI1YPL254W YJR107C-AP0CT86 78 aa3.85□□□□□ -1.79
HFI1YPL254W YBL081WP38180 368 aaKnown RBP3.85□□□□□ -1.79
HFI1YPL254W COF1Q03048 143 aaKnown RBP3.85□□□□□ -1.79
HFI1YPL254W YAL064WP39711 94 aa3.84□□□□□ -1.8
HFI1YPL254W YMR320WQ04897 101 aa3.84□□□□□ -1.8
HFI1YPL254W YGR035W-AQ45U48 73 aa3.84□□□□□ -1.8
HFI1YPL254W ERI1P62651 68 aaKnown RBP3.83□□□□□ -1.8
HFI1YPL254W SMD1Q02260 146 aaPredicted RBP3.83□□□□□ -1.8
HFI1YPL254W EMC6Q12431 108 aa3.83□□□□□ -1.8
HFI1YPL254W MVB12P42939 101 aa3.82□□□□□ -1.8
HFI1YPL254W ATP18P81450 59 aa3.82□□□□□ -1.8
HFI1YPL254W ICY1Q04329 127 aa3.82□□□□□ -1.8
HFI1YPL254W YDR029WQ12111 104 aa3.82□□□□□ -1.8
HFI1YPL254W YMR175W-AQ3E766 64 aa3.82□□□□□ -1.8
HFI1YPL254W YHL018WP38744 120 aaPredicted RBP3.81□□□□□ -1.8
HFI1YPL254W ERG28P40030 148 aa3.81□□□□□ -1.8
HFI1YPL254W YJR085CP47131 105 aaKnown RBP3.81□□□□□ -1.8
HFI1YPL254W TOR1P35169 2470 aa3.81□□□□□ -1.8
HFI1YPL254W YHL042WP38729 150 aa3.8□□□□□ -1.8
HFI1YPL254W RPC10P40422 70 aa3.8□□□□□ -1.8
HFI1YPL254W SGF11Q03067 99 aa3.8□□□□□ -1.8
HFI1YPL254W RPL33AP05744 107 aaKnown RBP3.79□□□□□ -1.8
HFI1YPL254W RPL29P05747 59 aaPredicted RBP3.79□□□□□ -1.8
HFI1YPL254W AQY2P0CD90 149 aa3.79□□□□□ -1.8
HFI1YPL254W RPL33BP41056 107 aaKnown RBP3.79□□□□□ -1.8
HFI1YPL254W RDS3Q06835 107 aaPredicted RBP3.79□□□□□ -1.8
HFI1YPL254W RRT15Q3E811 62 aa3.79□□□□□ -1.8
HFI1YPL254W YCL042WP25572 119 aa3.79□□□□□ -1.8
HFI1YPL254W IGD1P43598 195 aa3.79□□□□□ -1.8
HFI1YPL254W YDL241WQ07738 123 aa3.79□□□□□ -1.8
HFI1YPL254W YLR285C-AQ3E771 56 aa3.79□□□□□ -1.8
HFI1YPL254W YFR009W-AP0C5M9 85 aa3.78□□□□□ -1.8
HFI1YPL254W YLR156WP0CE96 114 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms