RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W SHU1P38751 150 aa1.69□□□□□ -2.14
SEC16YPL085W YTH1Q06102 208 aaPredicted RBP1.69□□□□□ -2.14
SEC16YPL085W Q0297Q9ZZV8 51 aa1.69□□□□□ -2.14
SEC16YPL085W NRG1Q03125 231 aa1.69□□□□□ -2.14
SEC16YPL085W PRM7Q12459 698 aa1.69□□□□□ -2.14
SEC16YPL085W MRS3P10566 314 aa1.69□□□□□ -2.14
SEC16YPL085W AIM11P87275 137 aa1.69□□□□□ -2.14
SEC16YPL085W YOL085CQ99345 113 aa1.69□□□□□ -2.14
SEC16YPL085W YDR182W-AQ3E796 67 aa1.69□□□□□ -2.14
SEC16YPL085W YNL162W-AQ3E7A8 72 aa1.69□□□□□ -2.14
SEC16YPL085W AGA1P32323 725 aa1.68□□□□□ -2.14
SEC16YPL085W YKL065W-AQ2V2P2 73 aa1.68□□□□□ -2.14
SEC16YPL085W YDR034W-BQ6Q5X2 51 aa1.68□□□□□ -2.14
SEC16YPL085W YPR014CQ6B0W2 109 aa1.68□□□□□ -2.14
SEC16YPL085W YJR107C-AP0CT86 78 aa1.68□□□□□ -2.14
SEC16YPL085W YOL097W-AQ3E7Y9 61 aa1.68□□□□□ -2.14
SEC16YPL085W AQY2P0CD90 149 aa1.68□□□□□ -2.14
SEC16YPL085W YGL149WP53116 101 aa1.68□□□□□ -2.14
SEC16YPL085W YDR029WQ12111 104 aa1.68□□□□□ -2.14
SEC16YPL085W MVB12P42939 101 aa1.68□□□□□ -2.14
SEC16YPL085W RPL14AP36105 138 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W YBR209WP38311 105 aa1.67□□□□□ -2.14
SEC16YPL085W RPL14BP38754 138 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W USV1Q12132 391 aa1.67□□□□□ -2.14
SEC16YPL085W SPS100P13130 326 aa1.67□□□□□ -2.14
SEC16YPL085W LIP1Q03579 150 aa1.67□□□□□ -2.14
SEC16YPL085W YOL160WQ08321 113 aa1.67□□□□□ -2.14
SEC16YPL085W YEL008WP40001 126 aa1.67□□□□□ -2.14
SEC16YPL085W YGL034CP53186 121 aa1.67□□□□□ -2.14
SEC16YPL085W YOL118CQ08259 102 aa1.67□□□□□ -2.14
SEC16YPL085W RPL28P02406 149 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W RPL18AP0CX49 186 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W RPL18BP0CX50 186 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W KRE9P39005 276 aa1.67□□□□□ -2.14
SEC16YPL085W OLI1P61829 76 aa1.67□□□□□ -2.14
SEC16YPL085W YIL014C-AQ02598 104 aa1.67□□□□□ -2.14
SEC16YPL085W HUB1Q6Q546 73 aa1.67□□□□□ -2.14
SEC16YPL085W HHF1P02309 103 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W RPL39P04650 51 aa1.67□□□□□ -2.14
SEC16YPL085W YBR121C-AP0C5L4 52 aa1.67□□□□□ -2.14
SEC16YPL085W YGL260WP53056 76 aa1.67□□□□□ -2.14
SEC16YPL085W YOR314WQ12506 109 aa1.67□□□□□ -2.14
SEC16YPL085W UTP20P35194 2493 aaKnown RBP1.67□□□□□ -2.14
SEC16YPL085W CAX4P53223 239 aa1.66□□□□□ -2.14
SEC16YPL085W YHL018WP38744 120 aaPredicted RBP1.66□□□□□ -2.14
SEC16YPL085W ICS3P47034 131 aa1.66□□□□□ -2.14
SEC16YPL085W ATO3Q12359 275 aa1.66□□□□□ -2.14
SEC16YPL085W YPR053CQ6Q5F3 151 aa1.66□□□□□ -2.14
SEC16YPL085W MIG1P27705 504 aa1.66□□□□□ -2.14
SEC16YPL085W YCL048W-AQ2V2Q2 79 aa1.66□□□□□ -2.14
SEC16YPL085W YIL134C-AQ45U18 67 aa1.66□□□□□ -2.14
SEC16YPL085W BRR2P32639 2163 aaKnown RBP1.66□□□□□ -2.14
SEC16YPL085W YHR212W-AP0CX91 67 aa1.66□□□□□ -2.14
SEC16YPL085W COX23P38824 151 aa1.66□□□□□ -2.14
SEC16YPL085W PBA1Q05778 276 aa1.66□□□□□ -2.14
SEC16YPL085W YER175W-AQ8TGU4 54 aa1.66□□□□□ -2.14
SEC16YPL085W RIF1P29539 1916 aa1.66□□□□□ -2.14
SEC16YPL085W YKR045CP36138 183 aa1.66□□□□□ -2.14
SEC16YPL085W GAT4P40569 121 aa1.65□□□□□ -2.14
SEC16YPL085W ATP18P81450 59 aa1.65□□□□□ -2.14
SEC16YPL085W DDR2P89113 61 aa1.65□□□□□ -2.14
SEC16YPL085W URA2P07259 2214 aaKnown RBP1.65□□□□□ -2.14
SEC16YPL085W YPR170W-BP0C5R9 85 aa1.65□□□□□ -2.14
SEC16YPL085W PBI2P0CT04 75 aaKnown RBP1.65□□□□□ -2.14
SEC16YPL085W FZF1P32805 299 aa1.65□□□□□ -2.14
SEC16YPL085W YDL157CQ12082 118 aa1.65□□□□□ -2.14
SEC16YPL085W IGD1P43598 195 aa1.65□□□□□ -2.15
SEC16YPL085W YGL088WP53151 121 aa1.65□□□□□ -2.15
SEC16YPL085W POL2P21951 2222 aaKnown RBP1.65□□□□□ -2.15
SEC16YPL085W SEN15Q04675 128 aa1.65□□□□□ -2.15
SEC16YPL085W YAL063C-AQ3E791 96 aa1.65□□□□□ -2.15
SEC16YPL085W EDC1P53080 175 aaPredicted RBP1.65□□□□□ -2.15
SEC16YPL085W YNL184CP53876 108 aa1.65□□□□□ -2.15
SEC16YPL085W MRP10O75012 95 aa1.64□□□□□ -2.15
SEC16YPL085W YDL022C-AP0C5L6 82 aa1.64□□□□□ -2.15
SEC16YPL085W YGL193CP53097 103 aa1.64□□□□□ -2.15
SEC16YPL085W SNA2P56508 79 aa1.64□□□□□ -2.15
SEC16YPL085W CMC4Q3E7A9 73 aa1.64□□□□□ -2.15
SEC16YPL085W YFL051CP43552 160 aa1.64□□□□□ -2.15
SEC16YPL085W YJR085CP47131 105 aaKnown RBP1.64□□□□□ -2.15
SEC16YPL085W YOR381W-AQ3E804 55 aa1.64□□□□□ -2.15
SEC16YPL085W COX7P10174 60 aa1.64□□□□□ -2.15
SEC16YPL085W TMC1Q08422 150 aaPredicted RBP1.64□□□□□ -2.15
SEC16YPL085W YOR072WQ08486 104 aa1.64□□□□□ -2.15
SEC16YPL085W RPL33AP05744 107 aaKnown RBP1.64□□□□□ -2.15
SEC16YPL085W RPL33BP41056 107 aaKnown RBP1.64□□□□□ -2.15
SEC16YPL085W YML054C-AQ3E809 52 aa1.64□□□□□ -2.15
SEC16YPL085W MPC3P53311 146 aa1.64□□□□□ -2.15
SEC16YPL085W LCL2Q08045 131 aa1.64□□□□□ -2.15
SEC16YPL085W YLR255CO13574 117 aa1.63□□□□□ -2.15
SEC16YPL085W COF1Q03048 143 aaKnown RBP1.63□□□□□ -2.15
SEC16YPL085W YJL127C-BQ3E828 52 aa1.63□□□□□ -2.15
SEC16YPL085W TOM6P33448 61 aa1.63□□□□□ -2.15
SEC16YPL085W YDR114CQ04597 100 aa1.63□□□□□ -2.15
SEC16YPL085W MIC10Q96VH5 97 aa1.63□□□□□ -2.15
SEC16YPL085W YHR073W-AP0C5N7 58 aa1.63□□□□□ -2.15
SEC16YPL085W Q0017Q9ZZX8 53 aa1.63□□□□□ -2.15
SEC16YPL085W ACC1Q00955 2233 aaKnown RBP1.63□□□□□ -2.15
SEC16YPL085W YAL065CO13511 128 aa1.63□□□□□ -2.15
SEC16YPL085W SAP30P38429 201 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 81.8 ms