RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	SRL1	Q08673	210 aa		5.5	□□□□□ -1.53
MSB3	YNL293W	MPC3	P53311	146 aa		5.49	□□□□□ -1.53
MSB3	YNL293W	YKL065W-A	Q2V2P2	73 aa		5.49	□□□□□ -1.53
MSB3	YNL293W	DDR48	P18899	430 aa	Known RBP	5.48	□□□□□ -1.53
MSB3	YNL293W	MRPS12	P53732	153 aa		5.48	□□□□□ -1.53
MSB3	YNL293W	CCW14	O13547	238 aa		5.48	□□□□□ -1.53
MSB3	YNL293W	YER188C-A	P0C0V2	99 aa		5.48	□□□□□ -1.53
MSB3	YNL293W	YMR122C	Q03879	124 aa		5.48	□□□□□ -1.53
MSB3	YNL293W	SPG4	Q04438	115 aa		5.48	□□□□□ -1.53
MSB3	YNL293W	IRC21	Q04772	201 aa		5.48	□□□□□ -1.53
MSB3	YNL293W	IRC19	Q07843	230 aa		5.48	□□□□□ -1.53
MSB3	YNL293W	OST5	Q92316	86 aa		5.48	□□□□□ -1.53
MSB3	YNL293W	SED1	Q01589	338 aa		5.47	□□□□□ -1.53
MSB3	YNL293W	YGR035W-A	Q45U48	73 aa		5.47	□□□□□ -1.53
MSB3	YNL293W	YAL064W-B	O13512	126 aa		5.46	□□□□□ -1.53
MSB3	YNL293W	SHU1	P38751	150 aa		5.46	□□□□□ -1.53
MSB3	YNL293W	YPS5	P53057	165 aa		5.46	□□□□□ -1.53
MSB3	YNL293W	NCE101	Q02820	53 aa		5.46	□□□□□ -1.53
MSB3	YNL293W	YMR254C	Q04838	102 aa		5.46	□□□□□ -1.53
MSB3	YNL293W	ATP15	P21306	62 aa		5.46	□□□□□ -1.54
MSB3	YNL293W	YDR182W-A	Q3E796	67 aa		5.46	□□□□□ -1.54
MSB3	YNL293W	RPL36B	O14455	100 aa	Known RBP	5.45	□□□□□ -1.54
MSB3	YNL293W	RPL36A	P05745	100 aa	Predicted RBP	5.45	□□□□□ -1.54
MSB3	YNL293W	YER135C	P40082	130 aa		5.45	□□□□□ -1.54
MSB3	YNL293W	FHN1	P53279	174 aa		5.45	□□□□□ -1.54
MSB3	YNL293W	NOP10	Q6Q547	58 aa	Predicted RBP	5.45	□□□□□ -1.54
MSB3	YNL293W	YOR008C-A	Q3E7B9	74 aa		5.44	□□□□□ -1.54
MSB3	YNL293W	FYV5	P25585	152 aa		5.44	□□□□□ -1.54
MSB3	YNL293W	YBL071C	P38185	102 aa		5.44	□□□□□ -1.54
MSB3	YNL293W	YLR111W	Q12528	110 aa		5.43	□□□□□ -1.54
MSB3	YNL293W	YCR022C	P25620	114 aa		5.42	□□□□□ -1.54
MSB3	YNL293W	KRE9	P39005	276 aa		5.42	□□□□□ -1.54
MSB3	YNL293W	URM1	P40554	99 aa	Predicted RBP	5.42	□□□□□ -1.54
MSB3	YNL293W	YFL015C	P43578	164 aa		5.42	□□□□□ -1.54
MSB3	YNL293W	YPR153W	Q06537	140 aa		5.42	□□□□□ -1.54
MSB3	YNL293W	YLR342W-A	Q3E810	57 aa		5.42	□□□□□ -1.54
MSB3	YNL293W	RPS23A	P0CX29	145 aa	Known RBP	5.4	□□□□□ -1.54
MSB3	YNL293W	RPS23B	P0CX30	145 aa		5.4	□□□□□ -1.54
MSB3	YNL293W	YGR018C	P53211	109 aa		5.4	□□□□□ -1.54
MSB3	YNL293W	YOR020W-A	Q3E824	90 aa		5.4	□□□□□ -1.54
MSB3	YNL293W	MRPL39	P36533	70 aa		5.4	□□□□□ -1.55
MSB3	YNL293W	YOL166W-A	Q8TGJ1	51 aa		5.4	□□□□□ -1.55
MSB3	YNL293W	ARC15	P40518	154 aa	RIP-Chip data	5.39	□□□□□ -1.55	not detected
MSB3	YNL293W	YJR107C-A	P0CT86	78 aa		5.38	□□□□□ -1.55
MSB3	YNL293W	RPS30A	P0CX33	63 aa	Known RBP	5.38	□□□□□ -1.55
MSB3	YNL293W	RPS30B	P0CX34	63 aa	Known RBP	5.38	□□□□□ -1.55
MSB3	YNL293W	HSP150	P32478	413 aa		5.38	□□□□□ -1.55
MSB3	YNL293W	YIR020C	P40575	100 aa		5.38	□□□□□ -1.55
MSB3	YNL293W	YGR045C	P53229	120 aa		5.38	□□□□□ -1.55
MSB3	YNL293W	YOR034C-A	Q3E735	80 aa		5.36	□□□□□ -1.55
MSB3	YNL293W	UTH1	P36135	365 aa		5.36	□□□□□ -1.55
MSB3	YNL293W	YHL037C	P38733	133 aa		5.36	□□□□□ -1.55
MSB3	YNL293W	RGM1	Q00453	211 aa		5.36	□□□□□ -1.55
MSB3	YNL293W	TRS23	Q03784	219 aa		5.36	□□□□□ -1.55
MSB3	YNL293W	REE1	P40893	198 aa		5.35	□□□□□ -1.55
MSB3	YNL293W	HOT13	P36078	116 aa		5.34	□□□□□ -1.55
MSB3	YNL293W	RPR2	P40571	144 aa		5.34	□□□□□ -1.55
MSB3	YNL293W	QCR10	P37299	77 aa		5.33	□□□□□ -1.56
MSB3	YNL293W	YFR032C-B	Q8TGU2	87 aa		5.33	□□□□□ -1.56
MSB3	YNL293W	YLR236C	A0A023PZG4	107 aa		5.33	□□□□□ -1.56
MSB3	YNL293W	YCR043C	P25361	127 aa		5.33	□□□□□ -1.56
MSB3	YNL293W	QCR8	P08525	94 aa		5.32	□□□□□ -1.56
MSB3	YNL293W	RPL38	P49167	78 aa	Known RBP	5.32	□□□□□ -1.56
MSB3	YNL293W	YJR146W	P47174	117 aa		5.31	□□□□□ -1.56
MSB3	YNL293W	YOL014W	Q08110	124 aa		5.31	□□□□□ -1.56
MSB3	YNL293W	YBR182C-A	Q8TGU6	64 aa		5.31	□□□□□ -1.56
MSB3	YNL293W	WWM1	P43582	211 aa	Known RBP	5.31	□□□□□ -1.56
MSB3	YNL293W	ATP18	P81450	59 aa		5.31	□□□□□ -1.56
MSB3	YNL293W	YMR244W	Q04018	355 aa		5.3	□□□□□ -1.56
MSB3	YNL293W	YOR032W-A	Q8TGS1	66 aa		5.29	□□□□□ -1.56
MSB3	YNL293W	RRT1	P38192	103 aa		5.28	□□□□□ -1.56
MSB3	YNL293W	LEE1	Q02799	301 aa	Known RBP	5.28	□□□□□ -1.56
MSB3	YNL293W	YKL097C	P34245	136 aa		5.27	□□□□□ -1.57
MSB3	YNL293W	LIP1	Q03579	150 aa		5.27	□□□□□ -1.57
MSB3	YNL293W	YER145C-A	A0A023PYF4	145 aa		5.26	□□□□□ -1.57
MSB3	YNL293W	FYV12	Q08559	129 aa		5.26	□□□□□ -1.57
MSB3	YNL293W	YIL156W-B	Q2V2P4	73 aa		5.26	□□□□□ -1.57
MSB3	YNL293W	SPC1	P46965	94 aa		5.25	□□□□□ -1.57
MSB3	YNL293W	YJL027C	P47063	138 aa	Predicted RBP	5.25	□□□□□ -1.57
MSB3	YNL293W	YSF3	P0C074	85 aa	Predicted RBP	5.25	□□□□□ -1.57
MSB3	YNL293W	SOM1	Q05676	74 aa		5.25	□□□□□ -1.57
MSB3	YNL293W	YCR095W-A	Q3E787	52 aa		5.24	□□□□□ -1.57
MSB3	YNL293W	MRPL38	P35996	138 aa	Predicted RBP	5.23	□□□□□ -1.57
MSB3	YNL293W	TVP23	P38962	199 aa		5.23	□□□□□ -1.57
MSB3	YNL293W	YFR009W-A	P0C5M9	85 aa		5.23	□□□□□ -1.57
MSB3	YNL293W	BLM10	P43583	2143 aa		5.22	□□□□□ -1.57
MSB3	YNL293W	RPS11A	P0CX47	156 aa	Known RBP	5.2	□□□□□ -1.58
MSB3	YNL293W	RPS11B	P0CX48	156 aa	Known RBP	5.2	□□□□□ -1.58
MSB3	YNL293W	YDR010C	Q12426	110 aa		5.2	□□□□□ -1.58
MSB3	YNL293W	EDC2	P40023	145 aa	Predicted RBP	5.19	□□□□□ -1.58
MSB3	YNL293W	HUB1	Q6Q546	73 aa		5.19	□□□□□ -1.58
MSB3	YNL293W	TMC1	Q08422	150 aa	Predicted RBP	5.19	□□□□□ -1.58
MSB3	YNL293W	YNL042W-B	Q3E7Z2	85 aa		5.19	□□□□□ -1.58
MSB3	YNL293W	YEL008W	P40001	126 aa		5.18	□□□□□ -1.58
MSB3	YNL293W	YIL102C	P40488	101 aa		5.18	□□□□□ -1.58
MSB3	YNL293W	MRX7	P53869	86 aa		5.17	□□□□□ -1.58
MSB3	YNL293W	MRPS8	Q03799	155 aa		5.17	□□□□□ -1.58
MSB3	YNL293W	YDR114C	Q04597	100 aa		5.17	□□□□□ -1.58
MSB3	YNL293W	YAR023C	D6VPM8	179 aa		5.16	□□□□□ -1.58
MSB3	YNL293W	BPH1	P25356	2167 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms