RNA–Protein interactions for RNA: YNL093W

YPT53, Transcript of Stress-induced Rab family GTPase, yeastyeast

Gene YPT53, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT53YNL093W YHR173CP38864 112 aa2.87□□□□□ -1.95
YPT53YNL093W VPS55P47111 140 aa2.87□□□□□ -1.95
YPT53YNL093W YLR162WQ06235 118 aa2.87□□□□□ -1.95
YPT53YNL093W YPR195CQ06594 109 aa2.87□□□□□ -1.95
YPT53YNL093W RPS22BQ3E7Y3 130 aaKnown RBP2.87□□□□□ -1.95
YPT53YNL093W IML1P47170 1584 aa2.87□□□□□ -1.95
YPT53YNL093W YLR236CA0A023PZG4 107 aa2.86□□□□□ -1.95
YPT53YNL093W QCR8P08525 94 aa2.86□□□□□ -1.95
YPT53YNL093W RPS23AP0CX29 145 aaKnown RBP2.86□□□□□ -1.95
YPT53YNL093W RPS23BP0CX30 145 aa2.86□□□□□ -1.95
YPT53YNL093W FPR2P32472 135 aa2.86□□□□□ -1.95
YPT53YNL093W YBR027CP38220 110 aa2.86□□□□□ -1.95
YPT53YNL093W YHR022CP38763 256 aa2.86□□□□□ -1.95
YPT53YNL093W POR2P40478 281 aa2.86□□□□□ -1.95
YPT53YNL093W RPL33BP41056 107 aaKnown RBP2.86□□□□□ -1.95
YPT53YNL093W SED1Q01589 338 aa2.86□□□□□ -1.95
YPT53YNL093W YDR246W-AQ3E763 66 aa2.86□□□□□ -1.95
YPT53YNL093W QCR9P22289 66 aa2.85□□□□□ -1.95
YPT53YNL093W MRPL38P35996 138 aaPredicted RBP2.85□□□□□ -1.95
YPT53YNL093W YEL014CP39999 101 aa2.85□□□□□ -1.95
YPT53YNL093W SNF2P22082 1703 aa2.85□□□□□ -1.95
YPT53YNL093W FKS1P38631 1876 aaKnown RBP2.84□□□□□ -1.95
YPT53YNL093W AIM19P40502 157 aa2.84□□□□□ -1.95
YPT53YNL093W IRC21Q04772 201 aa2.84□□□□□ -1.95
YPT53YNL093W YMR321CQ04898 105 aa2.84□□□□□ -1.95
YPT53YNL093W YCL048W-AQ2V2Q2 79 aa2.84□□□□□ -1.95
YPT53YNL093W YRF1-1P0CX20 1796 aa2.84□□□□□ -1.96
YPT53YNL093W YRF1-5P0CX21 1796 aa2.84□□□□□ -1.96
YPT53YNL093W YRF1-8P0CX22 1796 aa2.84□□□□□ -1.96
YPT53YNL093W RIF1P29539 1916 aa2.83□□□□□ -1.96
YPT53YNL093W MPC2P38857 129 aa2.83□□□□□ -1.96
YPT53YNL093W YMR122CQ03879 124 aa2.83□□□□□ -1.96
YPT53YNL093W YCR095W-AQ3E787 52 aa2.83□□□□□ -1.96
YPT53YNL093W CMC4Q3E7A9 73 aa2.83□□□□□ -1.96
YPT53YNL093W COX8P04039 78 aa2.82□□□□□ -1.96
YPT53YNL093W PAU6P0CE90 120 aa2.82□□□□□ -1.96
YPT53YNL093W PAU18P0CE91 120 aa2.82□□□□□ -1.96
YPT53YNL093W PAU8P0CE92 120 aa2.82□□□□□ -1.96
YPT53YNL093W PAU11P0CE93 120 aa2.82□□□□□ -1.96
YPT53YNL093W AIM4P38305 123 aaPredicted RBP2.82□□□□□ -1.96
YPT53YNL093W PAU13P38725 120 aa2.82□□□□□ -1.96
YPT53YNL093W YJL027CP47063 138 aaPredicted RBP2.82□□□□□ -1.96
YPT53YNL093W PAU4P53427 120 aa2.82□□□□□ -1.96
YPT53YNL093W MRX7P53869 86 aa2.82□□□□□ -1.96
YPT53YNL093W ERI1P62651 68 aaKnown RBP2.82□□□□□ -1.96
YPT53YNL093W PAU10Q03050 120 aa2.82□□□□□ -1.96
YPT53YNL093W YMR030W-AQ3E760 96 aa2.82□□□□□ -1.96
YPT53YNL093W PAU9Q3E770 120 aa2.82□□□□□ -1.96
YPT53YNL093W YGR035W-AQ45U48 73 aa2.82□□□□□ -1.96
YPT53YNL093W PDR15Q04182 1529 aaKnown RBP2.82□□□□□ -1.96
YPT53YNL093W REE1P40893 198 aa2.81□□□□□ -1.96
YPT53YNL093W SPC1P46965 94 aa2.81□□□□□ -1.96
YPT53YNL093W GIS2P53849 153 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
YPT53YNL093W SNA2P56508 79 aa2.81□□□□□ -1.96
YPT53YNL093W MIX17Q03667 156 aa2.81□□□□□ -1.96
YPT53YNL093W YOL085CQ99345 113 aa2.81□□□□□ -1.96
YPT53YNL093W HMRA2P0CY13 119 aa2.8□□□□□ -1.96
YPT53YNL093W FPR1P20081 114 aaKnown RBP2.8□□□□□ -1.96
YPT53YNL093W MRPL27P36526 146 aaPredicted RBP2.79□□□□□ -1.96
YPT53YNL093W DAD4P69851 72 aa2.79□□□□□ -1.96
YPT53YNL093W PRM7Q12459 698 aa2.79□□□□□ -1.96
YPT53YNL093W COA3Q3E7B2 85 aa2.79□□□□□ -1.96
YPT53YNL093W YBL071CP38185 102 aa2.78□□□□□ -1.96
YPT53YNL093W FIT2Q08906 153 aa2.78□□□□□ -1.96
YPT53YNL093W RPL26BP53221 127 aaKnown RBP2.77□□□□□ -1.97
YPT53YNL093W VPS68Q12016 184 aa2.77□□□□□ -1.97
YPT53YNL093W CYR1P08678 2026 aaKnown RBP2.76□□□□□ -1.97
YPT53YNL093W STT4P37297 1900 aa2.76□□□□□ -1.97
YPT53YNL093W CCW14O13547 238 aa2.76□□□□□ -1.97
YPT53YNL093W BSC4P53841 131 aa2.76□□□□□ -1.97
YPT53YNL093W YLR285C-AQ3E771 56 aa2.76□□□□□ -1.97
YPT53YNL093W YDR182W-AQ3E796 67 aa2.76□□□□□ -1.97
YPT53YNL093W PAU7P39545 55 aa2.75□□□□□ -1.97
YPT53YNL093W DNF2Q12675 1612 aa2.75□□□□□ -1.97
YPT53YNL093W VMR1P38735 1592 aa2.74□□□□□ -1.97
YPT53YNL093W RPS19BP07281 144 aaPredicted RBP2.74□□□□□ -1.97
YPT53YNL093W YDR010CQ12426 110 aa2.74□□□□□ -1.97
YPT53YNL093W YIL156W-BQ2V2P4 73 aa2.74□□□□□ -1.97
YPT53YNL093W SLH1P53327 1967 aaKnown RBP2.73□□□□□ -1.97
YPT53YNL093W BUD3P25558 1636 aa2.73□□□□□ -1.97
YPT53YNL093W NOP10Q6Q547 58 aaPredicted RBP2.73□□□□□ -1.97
YPT53YNL093W PAU1P0CE88 120 aa2.72□□□□□ -1.97
YPT53YNL093W PAU14P0CE89 120 aa2.72□□□□□ -1.97
YPT53YNL093W DSE2P38844 325 aa2.72□□□□□ -1.97
YPT53YNL093W PAU20Q08322 120 aa2.72□□□□□ -1.97
YPT53YNL093W DNF3Q12674 1656 aa2.72□□□□□ -1.97
YPT53YNL093W YGL014C-AP0C5N1 53 aa2.71□□□□□ -1.98
YPT53YNL093W NUP192P47054 1683 aa2.71□□□□□ -1.98
YPT53YNL093W YIL163CP40448 117 aa2.7□□□□□ -1.98
YPT53YNL093W YJL144WP47009 104 aa2.7□□□□□ -1.98
YPT53YNL093W YDR210WQ03482 75 aa2.7□□□□□ -1.98
YPT53YNL093W RPS11AP0CX47 156 aaKnown RBP2.69□□□□□ -1.98
YPT53YNL093W RPS11BP0CX48 156 aaKnown RBP2.69□□□□□ -1.98
YPT53YNL093W YHR007C-AQ07074 71 aa2.69□□□□□ -1.98
YPT53YNL093W YDL022C-AP0C5L6 82 aa2.68□□□□□ -1.98
YPT53YNL093W YDR114CQ04597 100 aa2.68□□□□□ -1.98
YPT53YNL093W FAS1P07149 2051 aaKnown RBP2.68□□□□□ -1.98
YPT53YNL093W RPL33AP05744 107 aaKnown RBP2.67□□□□□ -1.98
YPT53YNL093W YNL042W-BQ3E7Z2 85 aa2.67□□□□□ -1.98
YPT53YNL093W YOL166W-AQ8TGJ1 51 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms