RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C HSP12P22943 109 aaKnown RBP0.17□□□□□ -2.38
UBX4YMR067C AME1P38313 324 aa0.17□□□□□ -2.38
UBX4YMR067C YHL005CP38752 130 aa0.17□□□□□ -2.38
UBX4YMR067C SWM2P40342 146 aa0.17□□□□□ -2.38
UBX4YMR067C POG1P40473 351 aa0.17□□□□□ -2.38
UBX4YMR067C LSM1P47017 172 aaKnown RBP0.17□□□□□ -2.38
UBX4YMR067C VPS28Q02767 242 aa0.17□□□□□ -2.38
UBX4YMR067C YDR042CQ03205 200 aa0.17□□□□□ -2.38
UBX4YMR067C YMR090WQ04304 227 aaKnown RBP0.17□□□□□ -2.38
UBX4YMR067C SYM1Q06563 197 aa0.17□□□□□ -2.38
UBX4YMR067C YDL241WQ07738 123 aa0.17□□□□□ -2.38
UBX4YMR067C YLR342W-AQ3E810 57 aa0.17□□□□□ -2.38
UBX4YMR067C YGR121W-AQ3E816 71 aa0.17□□□□□ -2.38
UBX4YMR067C Q0032Q9ZZX7 96 aa0.17□□□□□ -2.38
UBX4YMR067C YAL065CO13511 128 aa0.16□□□□□ -2.38
UBX4YMR067C YBL039W-BP0C268 59 aa0.16□□□□□ -2.38
UBX4YMR067C HAP3P13434 144 aa0.16□□□□□ -2.38
UBX4YMR067C SPT14P32363 452 aa0.16□□□□□ -2.38
UBX4YMR067C ACP1P32463 125 aa0.16□□□□□ -2.38
UBX4YMR067C UTP11P34247 250 aaPredicted RBP0.16□□□□□ -2.38
UBX4YMR067C SLM6P38343 150 aa0.16□□□□□ -2.38
UBX4YMR067C VMA7P39111 118 aa0.16□□□□□ -2.38
UBX4YMR067C YAR029WP39549 74 aa0.16□□□□□ -2.38
UBX4YMR067C YMR141CP40211 102 aa0.16□□□□□ -2.38
UBX4YMR067C YGR269WP40326 108 aa0.16□□□□□ -2.38
UBX4YMR067C YJL009WP47078 108 aa0.16□□□□□ -2.38
UBX4YMR067C YJR128WP47162 119 aa0.16□□□□□ -2.38
UBX4YMR067C DDR2P89113 61 aa0.16□□□□□ -2.38
UBX4YMR067C PLP1Q04004 230 aa0.16□□□□□ -2.38
UBX4YMR067C TVP18Q04767 167 aa0.16□□□□□ -2.38
UBX4YMR067C YOR385WQ08909 290 aa0.16□□□□□ -2.38
UBX4YMR067C DAD1Q12248 94 aa0.16□□□□□ -2.38
UBX4YMR067C COA2Q3E823 68 aa0.16□□□□□ -2.38
UBX4YMR067C YHR213W-AQ8TGT4 77 aa0.16□□□□□ -2.38
UBX4YMR067C PAU19P0CE85 124 aa0.15□□□□□ -2.39
UBX4YMR067C PAU21P0CE86 164 aa0.15□□□□□ -2.39
UBX4YMR067C PAU22P0CE87 164 aa0.15□□□□□ -2.39
UBX4YMR067C QCR9P22289 66 aa0.15□□□□□ -2.39
UBX4YMR067C PAU3P25610 124 aa0.15□□□□□ -2.39
UBX4YMR067C PAU16P35994 123 aa0.15□□□□□ -2.39
UBX4YMR067C YBR016WP38216 128 aa0.15□□□□□ -2.39
UBX4YMR067C YBR027CP38220 110 aa0.15□□□□□ -2.39
UBX4YMR067C SHU1P38751 150 aa0.15□□□□□ -2.39
UBX4YMR067C IPI1P38803 334 aaPredicted RBP0.15□□□□□ -2.39
UBX4YMR067C YHR140WP38842 239 aa0.15□□□□□ -2.39
UBX4YMR067C EGD2P38879 174 aaKnown RBP0.15□□□□□ -2.39
UBX4YMR067C YEA6P39953 335 aa0.15□□□□□ -2.39
UBX4YMR067C PAU15P40585 124 aa0.15□□□□□ -2.39
UBX4YMR067C MVB12P42939 101 aa0.15□□□□□ -2.39
UBX4YMR067C MAK3Q03503 176 aa0.15□□□□□ -2.39
UBX4YMR067C SPC24Q04477 213 aa0.15□□□□□ -2.39
UBX4YMR067C AVO2Q04749 426 aa0.15□□□□□ -2.39
UBX4YMR067C YNL042W-BQ3E7Z2 85 aa0.15□□□□□ -2.39
UBX4YMR067C YKL068W-AQ3E826 78 aa0.15□□□□□ -2.39
UBX4YMR067C SUS1Q6WNK7 96 aa0.15□□□□□ -2.39
UBX4YMR067C MED11Q99278 115 aa0.15□□□□□ -2.39
UBX4YMR067C YHR073W-AP0C5N7 58 aa0.14□□□□□ -2.39
UBX4YMR067C YKR041WP36134 250 aa0.14□□□□□ -2.39
UBX4YMR067C RPB11P38902 120 aa0.14□□□□□ -2.39
UBX4YMR067C MOG1P47123 218 aa0.14□□□□□ -2.39
UBX4YMR067C RBL2P48606 106 aaKnown RBP0.14□□□□□ -2.39
UBX4YMR067C VMA10P48836 114 aaKnown RBP0.14□□□□□ -2.39
UBX4YMR067C BSC4P53841 131 aa0.14□□□□□ -2.39
UBX4YMR067C YNL190WP53872 204 aa0.14□□□□□ -2.39
UBX4YMR067C ATP19P81451 68 aa0.14□□□□□ -2.39
UBX4YMR067C PKR1Q03880 122 aaKnown RBP0.14□□□□□ -2.39
UBX4YMR067C GPI19Q04082 140 aa0.14□□□□□ -2.39
UBX4YMR067C YOR072WQ08486 104 aa0.14□□□□□ -2.39
UBX4YMR067C YOR105WQ08504 108 aa0.14□□□□□ -2.39
UBX4YMR067C YLR146W-AQ2V2P1 62 aa0.14□□□□□ -2.39
UBX4YMR067C YKL023C-AQ2V2P3 75 aa0.14□□□□□ -2.39
UBX4YMR067C RPL36BO14455 100 aaKnown RBP0.13□□□□□ -2.39
UBX4YMR067C RPL29P05747 59 aaPredicted RBP0.13□□□□□ -2.39
UBX4YMR067C RPS22AP0C0W1 130 aaKnown RBP0.13□□□□□ -2.39
UBX4YMR067C YLR157W-DP0CE99 70 aa0.13□□□□□ -2.39
UBX4YMR067C FUN14P18411 198 aa0.13□□□□□ -2.39
UBX4YMR067C PAU7P39545 55 aa0.13□□□□□ -2.39
UBX4YMR067C CYB5P40312 120 aa0.13□□□□□ -2.39
UBX4YMR067C PAU5P43575 122 aa0.13□□□□□ -2.39
UBX4YMR067C YCL001W-AP87012 153 aa0.13□□□□□ -2.39
UBX4YMR067C COF1Q03048 143 aaKnown RBP0.13□□□□□ -2.39
UBX4YMR067C YML079WQ03629 201 aa0.13□□□□□ -2.39
UBX4YMR067C GIM5Q04493 163 aa0.13□□□□□ -2.39
UBX4YMR067C SHH4Q06236 168 aa0.13□□□□□ -2.39
UBX4YMR067C FCF2Q12035 217 aaPredicted RBP0.13□□□□□ -2.39
UBX4YMR067C YDL157CQ12082 118 aa0.13□□□□□ -2.39
UBX4YMR067C YBR230W-AQ3E762 66 aa0.13□□□□□ -2.39
UBX4YMR067C CMC2Q3E7A4 109 aa0.13□□□□□ -2.39
UBX4YMR067C YOR008C-AQ3E7B9 74 aa0.13□□□□□ -2.39
UBX4YMR067C YOL097W-AQ3E7Y9 61 aa0.13□□□□□ -2.39
UBX4YMR067C YML054C-AQ3E809 52 aa0.13□□□□□ -2.39
UBX4YMR067C YJL127C-BQ3E828 52 aa0.13□□□□□ -2.39
UBX4YMR067C PFY1P07274 126 aa0.12□□□□□ -2.39
UBX4YMR067C PAU1P0CE88 120 aa0.12□□□□□ -2.39
UBX4YMR067C PAU14P0CE89 120 aa0.12□□□□□ -2.39
UBX4YMR067C PAU6P0CE90 120 aa0.12□□□□□ -2.39
UBX4YMR067C PAU18P0CE91 120 aa0.12□□□□□ -2.39
UBX4YMR067C PAU8P0CE92 120 aa0.12□□□□□ -2.39
UBX4YMR067C PAU11P0CE93 120 aa0.12□□□□□ -2.39
UBX4YMR067C HMRA2P0CY13 119 aa0.12□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms