RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C YSF3P0C074 85 aaPredicted RBP1.5□□□□□ -2.17
SUB1YMR039C YCR001WP25347 104 aa1.5□□□□□ -2.17
SUB1YMR039C YMR321CQ04898 105 aa1.5□□□□□ -2.17
SUB1YMR039C YOL118CQ08259 102 aa1.5□□□□□ -2.17
SUB1YMR039C YPR145C-AQ2V2P0 78 aa1.5□□□□□ -2.17
SUB1YMR039C YLR285C-AQ3E771 56 aa1.5□□□□□ -2.17
SUB1YMR039C UTP10P42945 1769 aaKnown RBP1.49□□□□□ -2.17
SUB1YMR039C SPO14P36126 1683 aa1.49□□□□□ -2.17
SUB1YMR039C YOL013W-AP0C272 63 aaPredicted RBP1.49□□□□□ -2.17
SUB1YMR039C NHP2P32495 156 aaPredicted RBP1.49□□□□□ -2.17
SUB1YMR039C MRPL38P35996 138 aaPredicted RBP1.49□□□□□ -2.17
SUB1YMR039C YIL163CP40448 117 aa1.49□□□□□ -2.17
SUB1YMR039C LSM6Q06406 86 aaKnown RBP1.49□□□□□ -2.17
SUB1YMR039C LCL2Q08045 131 aa1.49□□□□□ -2.17
SUB1YMR039C APC1P53886 1748 aa1.49□□□□□ -2.17
SUB1YMR039C RPL22AP05749 121 aaKnown RBP1.48□□□□□ -2.17
SUB1YMR039C YHR214C-DP0CX93 97 aa1.48□□□□□ -2.17
SUB1YMR039C SPC1P46965 94 aa1.48□□□□□ -2.17
SUB1YMR039C YDR381C-AQ3E6R5 114 aa1.48□□□□□ -2.17
SUB1YMR039C YCR095W-AQ3E787 52 aa1.48□□□□□ -2.17
SUB1YMR039C YBR292CP38357 123 aa1.47□□□□□ -2.17
SUB1YMR039C SWM2P40342 146 aa1.47□□□□□ -2.17
SUB1YMR039C MIC27P50945 234 aa1.47□□□□□ -2.17
SUB1YMR039C MGR2Q02889 113 aa1.47□□□□□ -2.17
SUB1YMR039C YCL048W-AQ2V2Q2 79 aa1.47□□□□□ -2.17
SUB1YMR039C MHF2Q3E829 80 aa1.47□□□□□ -2.17
SUB1YMR039C MYO4P32492 1471 aa1.47□□□□□ -2.17
SUB1YMR039C YCF1P39109 1515 aaKnown RBP1.46□□□□□ -2.18
SUB1YMR039C UFD4P33202 1483 aa1.46□□□□□ -2.18
SUB1YMR039C MRP17P28778 131 aa1.46□□□□□ -2.18
SUB1YMR039C SSS1P35179 80 aa1.46□□□□□ -2.18
SUB1YMR039C YBL071CP38185 102 aa1.46□□□□□ -2.18
SUB1YMR039C VPS55P47111 140 aa1.46□□□□□ -2.18
SUB1YMR039C MRPS12P53732 153 aa1.46□□□□□ -2.18
SUB1YMR039C YDR210WQ03482 75 aa1.46□□□□□ -2.18
SUB1YMR039C YOL131WQ08270 108 aa1.46□□□□□ -2.18
SUB1YMR039C YOR343CQ12484 108 aa1.46□□□□□ -2.18
SUB1YMR039C YGL041C-BQ3E750 60 aa1.46□□□□□ -2.18
SUB1YMR039C SSK2P53599 1579 aa1.46□□□□□ -2.18
SUB1YMR039C ACC1Q00955 2233 aaKnown RBP1.46□□□□□ -2.18
SUB1YMR039C VPS15P22219 1454 aa1.45□□□□□ -2.18
SUB1YMR039C CCW14O13547 238 aa1.45□□□□□ -2.18
SUB1YMR039C PAU6P0CE90 120 aa1.45□□□□□ -2.18
SUB1YMR039C PAU18P0CE91 120 aa1.45□□□□□ -2.18
SUB1YMR039C HUA1P40325 198 aa1.45□□□□□ -2.18
SUB1YMR039C MRX7P53869 86 aa1.45□□□□□ -2.18
SUB1YMR039C MOT1P32333 1867 aa1.45□□□□□ -2.18
SUB1YMR039C RIM15P43565 1770 aa1.44□□□□□ -2.18
SUB1YMR039C PDX3P38075 228 aaKnown RBP1.44□□□□□ -2.18
SUB1YMR039C ATX1P38636 73 aa1.44□□□□□ -2.18
SUB1YMR039C MVB12P42939 101 aa1.44□□□□□ -2.18
SUB1YMR039C SNA2P56508 79 aa1.44□□□□□ -2.18
SUB1YMR039C CDC25P04821 1589 aa1.43□□□□□ -2.18
SUB1YMR039C IRC20Q06554 1556 aa1.43□□□□□ -2.18
SUB1YMR039C YNL198CP40166 100 aa1.43□□□□□ -2.18
SUB1YMR039C YGR240C-AQ3E786 66 aa1.43□□□□□ -2.18
SUB1YMR039C YPL038W-AQ3E7B4 63 aa1.43□□□□□ -2.18
SUB1YMR039C ARO1P08566 1588 aaKnown RBP1.42□□□□□ -2.18
SUB1YMR039C SNQ2P32568 1501 aaKnown RBP1.42□□□□□ -2.18
SUB1YMR039C MRPL31P14063 131 aaPredicted RBP1.42□□□□□ -2.18
SUB1YMR039C HHY1P39982 102 aa1.42□□□□□ -2.18
SUB1YMR039C YGR121W-AQ3E816 71 aa1.42□□□□□ -2.18
SUB1YMR039C YFL041W-AQ3E817 63 aa1.42□□□□□ -2.18
SUB1YMR039C YHR213W-BQ8TGK1 99 aa1.42□□□□□ -2.18
SUB1YMR039C BRR2P32639 2163 aaKnown RBP1.42□□□□□ -2.18
SUB1YMR039C PDR5P33302 1511 aaKnown RBP1.41□□□□□ -2.18
SUB1YMR039C YER188C-AP0C0V2 99 aa1.41□□□□□ -2.18
SUB1YMR039C PAU8P0CE92 120 aa1.41□□□□□ -2.18
SUB1YMR039C PAU11P0CE93 120 aa1.41□□□□□ -2.18
SUB1YMR039C TIM12P32830 109 aa1.41□□□□□ -2.18
SUB1YMR039C PAU13P38725 120 aa1.41□□□□□ -2.18
SUB1YMR039C MPC2P38857 129 aa1.41□□□□□ -2.18
SUB1YMR039C PAU4P53427 120 aa1.41□□□□□ -2.18
SUB1YMR039C PAU10Q03050 120 aa1.41□□□□□ -2.18
SUB1YMR039C PAU23Q07987 124 aa1.41□□□□□ -2.18
SUB1YMR039C PAU17Q12370 124 aa1.41□□□□□ -2.18
SUB1YMR039C YOR314WQ12506 109 aa1.41□□□□□ -2.18
SUB1YMR039C PAU9Q3E770 120 aa1.41□□□□□ -2.18
SUB1YMR039C YNR034W-AQ3E841 98 aa1.41□□□□□ -2.18
SUB1YMR039C YIL134C-AQ45U18 67 aa1.41□□□□□ -2.18
SUB1YMR039C HUG1Q6Q5K6 68 aa1.41□□□□□ -2.18
SUB1YMR039C SPT6P23615 1451 aaKnown RBP1.41□□□□□ -2.18
SUB1YMR039C YBT1P32386 1661 aa1.41□□□□□ -2.18
SUB1YMR039C DNF3Q12674 1656 aa1.41□□□□□ -2.18
SUB1YMR039C ULS1Q08562 1619 aa1.4□□□□□ -2.18
SUB1YMR039C IML1P47170 1584 aa1.4□□□□□ -2.19
SUB1YMR039C YAL065CO13511 128 aa1.4□□□□□ -2.19
SUB1YMR039C YLR255CO13574 117 aa1.4□□□□□ -2.19
SUB1YMR039C YOR105WQ08504 108 aa1.4□□□□□ -2.19
SUB1YMR039C YIL156W-BQ2V2P4 73 aa1.4□□□□□ -2.19
SUB1YMR039C VTH1P40438 1549 aa1.4□□□□□ -2.19
SUB1YMR039C VTH2P40890 1549 aa1.4□□□□□ -2.19
SUB1YMR039C TY3B-GQ99315 1547 aa1.4□□□□□ -2.19
SUB1YMR039C USO1P25386 1790 aa1.39□□□□□ -2.19
SUB1YMR039C BCK1Q01389 1478 aa1.39□□□□□ -2.19
SUB1YMR039C RPS11AP0CX47 156 aaKnown RBP1.39□□□□□ -2.19
SUB1YMR039C RPS11BP0CX48 156 aaKnown RBP1.39□□□□□ -2.19
SUB1YMR039C BSC4P53841 131 aa1.39□□□□□ -2.19
SUB1YMR039C YDR010CQ12426 110 aa1.39□□□□□ -2.19
SUB1YMR039C NUP188P52593 1655 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms