RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C YHR125WP38831 101 aa2.36□□□□□ -2.03
RPN13YLR421C MPC2P38857 129 aa2.36□□□□□ -2.03
RPN13YLR421C GLE2P40066 365 aa2.36□□□□□ -2.03
RPN13YLR421C YIL086CP40503 102 aa2.36□□□□□ -2.03
RPN13YLR421C IMP2P46972 177 aa2.36□□□□□ -2.03
RPN13YLR421C YDR114CQ04597 100 aa2.36□□□□□ -2.03
RPN13YLR421C PRM7Q12459 698 aa2.36□□□□□ -2.03
RPN13YLR421C YMR175W-AQ3E766 64 aa2.36□□□□□ -2.03
RPN13YLR421C KTI11Q3E840 82 aa2.36□□□□□ -2.03
RPN13YLR421C YFR032C-BQ8TGU2 87 aa2.36□□□□□ -2.03
RPN13YLR421C SEC16P48415 2195 aaKnown RBP2.35□□□□□ -2.03
RPN13YLR421C YLR156WP0CE96 114 aa2.35□□□□□ -2.03
RPN13YLR421C YLR159WP0CE97 114 aa2.35□□□□□ -2.03
RPN13YLR421C YLR161WP0CE98 114 aa2.35□□□□□ -2.03
RPN13YLR421C ATP15P21306 62 aa2.35□□□□□ -2.03
RPN13YLR421C YSY6P38374 65 aa2.35□□□□□ -2.03
RPN13YLR421C ARC15P40518 154 aaRIP-Chip data2.35□□□□□ -2.03not detected
RPN13YLR421C YNL190WP53872 204 aa2.35□□□□□ -2.03
RPN13YLR421C YLR042CQ07990 161 aa2.35□□□□□ -2.03
RPN13YLR421C YLR412C-AQ3E742 68 aa2.35□□□□□ -2.03
RPN13YLR421C YIL046W-AQ3E7Z4 54 aa2.35□□□□□ -2.03
RPN13YLR421C KSH1Q8TGJ3 72 aa2.35□□□□□ -2.03
RPN13YLR421C BLM10P43583 2143 aa2.35□□□□□ -2.03
RPN13YLR421C CCW14O13547 238 aa2.34□□□□□ -2.03
RPN13YLR421C BET1P22804 142 aa2.34□□□□□ -2.03
RPN13YLR421C YJL027CP47063 138 aaPredicted RBP2.34□□□□□ -2.03
RPN13YLR421C YGR164WP53291 111 aa2.34□□□□□ -2.03
RPN13YLR421C EMC6Q12431 108 aa2.34□□□□□ -2.03
RPN13YLR421C YDR246W-AQ3E763 66 aa2.34□□□□□ -2.03
RPN13YLR421C YOR008C-AQ3E7B9 74 aa2.34□□□□□ -2.03
RPN13YLR421C ACC1Q00955 2233 aaKnown RBP2.34□□□□□ -2.04
RPN13YLR421C POL2P21951 2222 aaKnown RBP2.33□□□□□ -2.04
RPN13YLR421C UBC4P15731 148 aa2.33□□□□□ -2.04
RPN13YLR421C YKR045CP36138 183 aa2.33□□□□□ -2.04
RPN13YLR421C RRT1P38192 103 aa2.33□□□□□ -2.04
RPN13YLR421C YER084WP40057 128 aa2.33□□□□□ -2.04
RPN13YLR421C DCV1P43595 202 aa2.33□□□□□ -2.04
RPN13YLR421C YGL088WP53151 121 aa2.33□□□□□ -2.04
RPN13YLR421C YMR320WQ04897 101 aa2.33□□□□□ -2.04
RPN13YLR421C BRR2P32639 2163 aaKnown RBP2.33□□□□□ -2.04
RPN13YLR421C FAS1P07149 2051 aaKnown RBP2.32□□□□□ -2.04
RPN13YLR421C YRA2P36036 203 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
RPN13YLR421C YHR022CP38763 256 aa2.32□□□□□ -2.04
RPN13YLR421C YER187WP40102 141 aa2.32□□□□□ -2.04
RPN13YLR421C HUR1P45820 110 aa2.32□□□□□ -2.04
RPN13YLR421C PIR5P46999 287 aa2.32□□□□□ -2.04
RPN13YLR421C SHU1P38751 150 aa2.31□□□□□ -2.04
RPN13YLR421C SFT1P43682 97 aa2.31□□□□□ -2.04
RPN13YLR421C YJR146WP47174 117 aa2.31□□□□□ -2.04
RPN13YLR421C YGR219WP53307 113 aa2.31□□□□□ -2.04
RPN13YLR421C YBR209WP38311 105 aa2.3□□□□□ -2.04
RPN13YLR421C YAR029WP39549 74 aa2.3□□□□□ -2.04
RPN13YLR421C TSC3Q3E790 80 aa2.3□□□□□ -2.04
RPN13YLR421C YMR105W-AQ8TGS8 64 aa2.3□□□□□ -2.04
RPN13YLR421C BEM2P39960 2167 aaKnown RBP2.29□□□□□ -2.04
RPN13YLR421C AIM4P38305 123 aaPredicted RBP2.29□□□□□ -2.04
RPN13YLR421C RSM19P53733 91 aaPredicted RBP2.29□□□□□ -2.04
RPN13YLR421C YLR285C-AQ3E771 56 aa2.29□□□□□ -2.04
RPN13YLR421C YNL277W-AQ3E7Z0 62 aa2.29□□□□□ -2.04
RPN13YLR421C RPL39P04650 51 aa2.28□□□□□ -2.04
RPN13YLR421C RPS23AP0CX29 145 aaKnown RBP2.28□□□□□ -2.04
RPN13YLR421C RPS23BP0CX30 145 aa2.28□□□□□ -2.04
RPN13YLR421C YFL019CP43576 117 aa2.28□□□□□ -2.04
RPN13YLR421C SIP18P50263 79 aa2.28□□□□□ -2.04
RPN13YLR421C YGR025WP53216 100 aa2.28□□□□□ -2.04
RPN13YLR421C RGM1Q00453 211 aa2.28□□□□□ -2.04
RPN13YLR421C IRC21Q04772 201 aa2.28□□□□□ -2.04
RPN13YLR421C ATP20Q12233 115 aa2.28□□□□□ -2.04
RPN13YLR421C YOR034C-AQ3E735 80 aa2.28□□□□□ -2.04
RPN13YLR421C YBR200W-AQ3E755 54 aa2.28□□□□□ -2.04
RPN13YLR421C YOR032W-AQ8TGS1 66 aa2.28□□□□□ -2.04
RPN13YLR421C YLR236CA0A023PZG4 107 aa2.27□□□□□ -2.05
RPN13YLR421C YAR023CD6VPM8 179 aa2.27□□□□□ -2.05
RPN13YLR421C RPL26AP05743 127 aaKnown RBP2.27□□□□□ -2.05
RPN13YLR421C QCR8P08525 94 aa2.27□□□□□ -2.05
RPN13YLR421C YHR032W-AP0C5N6 59 aa2.27□□□□□ -2.05
RPN13YLR421C MRPL38P35996 138 aaPredicted RBP2.27□□□□□ -2.05
RPN13YLR421C EDC1P53080 175 aaPredicted RBP2.27□□□□□ -2.05
RPN13YLR421C RPL26BP53221 127 aaKnown RBP2.27□□□□□ -2.05
RPN13YLR421C ERI1P62651 68 aaKnown RBP2.27□□□□□ -2.05
RPN13YLR421C RRT15Q3E811 62 aa2.27□□□□□ -2.05
RPN13YLR421C YAL065CO13511 128 aa2.26□□□□□ -2.05
RPN13YLR421C YJR107C-AP0CT86 78 aa2.26□□□□□ -2.05
RPN13YLR421C YEL008WP40001 126 aa2.26□□□□□ -2.05
RPN13YLR421C GAT4P40569 121 aa2.26□□□□□ -2.05
RPN13YLR421C POR2P40478 281 aa2.25□□□□□ -2.05
RPN13YLR421C ATP18P81450 59 aa2.25□□□□□ -2.05
RPN13YLR421C ICY1Q04329 127 aa2.25□□□□□ -2.05
RPN13YLR421C YLR162WQ06235 118 aa2.25□□□□□ -2.05
RPN13YLR421C YOL014WQ08110 124 aa2.25□□□□□ -2.05
RPN13YLR421C YGR121W-AQ3E816 71 aa2.25□□□□□ -2.05
RPN13YLR421C YML100W-AQ8TGT0 57 aa2.25□□□□□ -2.05
RPN13YLR421C SEN1Q00416 2231 aaKnown RBP2.25□□□□□ -2.05
RPN13YLR421C TOM1Q03280 3268 aa2.24□□□□□ -2.05
RPN13YLR421C YFR035CP43608 114 aa2.24□□□□□ -2.05
RPN13YLR421C ICS3P47034 131 aa2.24□□□□□ -2.05
RPN13YLR421C YDR274CP87283 123 aa2.24□□□□□ -2.05
RPN13YLR421C CCW12Q12127 133 aa2.24□□□□□ -2.05
RPN13YLR421C MIC10Q96VH5 97 aa2.24□□□□□ -2.05
RPN13YLR421C RPL36BO14455 100 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms