RNA–Protein interactions for RNA: YLR088W

GAA1, Transcript of Subunit of the GPI:protein transamidase complex, yeast

Gene GAA1, Length 1,845 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAA1	YLR088W	YKR045C	P36138	183 aa		4.32	□□□□□ -1.72
GAA1	YLR088W	YDL157C	Q12082	118 aa		4.32	□□□□□ -1.72
GAA1	YLR088W	LSM2	P38203	95 aa	Known RBP	4.31	□□□□□ -1.72
GAA1	YLR088W	RPL26A	P05743	127 aa	Known RBP	4.3	□□□□□ -1.72
GAA1	YLR088W	RPL26B	P53221	127 aa	Known RBP	4.3	□□□□□ -1.72
GAA1	YLR088W	OST5	Q92316	86 aa		4.3	□□□□□ -1.72
GAA1	YLR088W	CMC4	Q3E7A9	73 aa		4.3	□□□□□ -1.72
GAA1	YLR088W	PAU24	P38155	120 aa		4.29	□□□□□ -1.72
GAA1	YLR088W	YHR138C	P38841	114 aa	Predicted RBP	4.29	□□□□□ -1.72
GAA1	YLR088W	YDR042C	Q03205	200 aa		4.29	□□□□□ -1.72
GAA1	YLR088W	RPS25B	P0C0T4	108 aa	Known RBP	4.28	□□□□□ -1.72
GAA1	YLR088W	STF2	P16965	84 aa		4.28	□□□□□ -1.72
GAA1	YLR088W	FIT2	Q08906	153 aa		4.28	□□□□□ -1.72
GAA1	YLR088W	RPS25A	Q3E792	108 aa	Predicted RBP	4.28	□□□□□ -1.72
GAA1	YLR088W	COX9	P07255	59 aa		4.28	□□□□□ -1.72
GAA1	YLR088W	UTR5	P32630	166 aa		4.28	□□□□□ -1.72
GAA1	YLR088W	NRG2	P38082	220 aa		4.28	□□□□□ -1.72
GAA1	YLR088W	YFL065C	P43539	102 aa		4.28	□□□□□ -1.72
GAA1	YLR088W	YPR203W	Q08994	102 aa		4.28	□□□□□ -1.72
GAA1	YLR088W	SUS1	Q6WNK7	96 aa		4.28	□□□□□ -1.72
GAA1	YLR088W	YHR213W-A	Q8TGT4	77 aa		4.28	□□□□□ -1.72
GAA1	YLR088W	PAU19	P0CE85	124 aa		4.27	□□□□□ -1.73
GAA1	YLR088W	PAU3	P25610	124 aa		4.27	□□□□□ -1.73
GAA1	YLR088W	POP3	P53833	195 aa	Predicted RBP	4.27	□□□□□ -1.73
GAA1	YLR088W	PCC1	Q3E833	88 aa		4.27	□□□□□ -1.73
GAA1	YLR088W	RTC6	O14464	93 aa		4.26	□□□□□ -1.73
GAA1	YLR088W	DAN1	P47178	298 aa		4.26	□□□□□ -1.73
GAA1	YLR088W	YIL014C-A	Q02598	104 aa		4.26	□□□□□ -1.73
GAA1	YLR088W	ATG8	P38182	117 aa	RIP-Chip data	4.25	□□□□□ -1.73	not detected
GAA1	YLR088W	SVP26	P38869	228 aa		4.25	□□□□□ -1.73
GAA1	YLR088W	YLR363W-A	Q3E747	85 aa		4.25	□□□□□ -1.73
GAA1	YLR088W	YJR146W	P47174	117 aa		4.25	□□□□□ -1.73
GAA1	YLR088W	SNN1	P48232	102 aa		4.25	□□□□□ -1.73
GAA1	YLR088W	EMC6	Q12431	108 aa		4.25	□□□□□ -1.73
GAA1	YLR088W	YCR085W	P25650	117 aa		4.24	□□□□□ -1.73
GAA1	YLR088W	MIX17	Q03667	156 aa		4.24	□□□□□ -1.73
GAA1	YLR088W	YHR213W	P0CI67	198 aa		4.23	□□□□□ -1.73
GAA1	YLR088W	KRE1	P17260	313 aa		4.23	□□□□□ -1.73
GAA1	YLR088W	YEL014C	P39999	101 aa		4.23	□□□□□ -1.73
GAA1	YLR088W	POC4	Q12245	148 aa	Predicted RBP	4.23	□□□□□ -1.73
GAA1	YLR088W	SOD1	P00445	154 aa	Known RBP	4.23	□□□□□ -1.73
GAA1	YLR088W	YLR194C	Q05777	254 aa		4.23	□□□□□ -1.73
GAA1	YLR088W	PAU16	P35994	123 aa		4.22	□□□□□ -1.73
GAA1	YLR088W	PAU15	P40585	124 aa		4.22	□□□□□ -1.73
GAA1	YLR088W	MRPS9	P38120	278 aa		4.21	□□□□□ -1.74
GAA1	YLR088W	YBR013C	P38215	129 aa		4.21	□□□□□ -1.74
GAA1	YLR088W	YJL197C-A	P0C5P0	93 aa		4.21	□□□□□ -1.74
GAA1	YLR088W	RPB7	P34087	171 aa		4.21	□□□□□ -1.74
GAA1	YLR088W	RGM1	Q00453	211 aa		4.21	□□□□□ -1.74
GAA1	YLR088W	AVO2	Q04749	426 aa		4.21	□□□□□ -1.74
GAA1	YLR088W	YMR175W-A	Q3E766	64 aa		4.21	□□□□□ -1.74
GAA1	YLR088W	GCV3	P39726	170 aa	Predicted RBP	4.2	□□□□□ -1.74
GAA1	YLR088W	COX23	P38824	151 aa		4.19	□□□□□ -1.74
GAA1	YLR088W	RPL36B	O14455	100 aa	Known RBP	4.18	□□□□□ -1.74
GAA1	YLR088W	RPL36A	P05745	100 aa	Predicted RBP	4.18	□□□□□ -1.74
GAA1	YLR088W	VPS55	P47111	140 aa		4.18	□□□□□ -1.74
GAA1	YLR088W	ENV10	Q99382	181 aa		4.18	□□□□□ -1.74
GAA1	YLR088W	YHR212W-A	P0CX91	67 aa		4.18	□□□□□ -1.74
GAA1	YLR088W	RPA12	P32529	125 aa	Known RBP	4.18	□□□□□ -1.74
GAA1	YLR088W	RSM18	P40033	138 aa		4.18	□□□□□ -1.74
GAA1	YLR088W	YJL144W	P47009	104 aa		4.18	□□□□□ -1.74
GAA1	YLR088W	HOR7	Q05827	59 aa		4.18	□□□□□ -1.74
GAA1	YLR088W	QCR8	P08525	94 aa		4.17	□□□□□ -1.74
GAA1	YLR088W	ICY1	Q04329	127 aa		4.17	□□□□□ -1.74
GAA1	YLR088W	PAI3	P01094	68 aa		4.16	□□□□□ -1.74
GAA1	YLR088W	YHL005C	P38752	130 aa		4.16	□□□□□ -1.74
GAA1	YLR088W	HPA2	Q06592	156 aa		4.16	□□□□□ -1.74
GAA1	YLR088W	YOR192C-C	Q3E736	78 aa		4.16	□□□□□ -1.74
GAA1	YLR088W	PAU5	P43575	122 aa		4.16	□□□□□ -1.74
GAA1	YLR088W	RDS3	Q06835	107 aa	Predicted RBP	4.16	□□□□□ -1.74
GAA1	YLR088W	YHR022C	P38763	256 aa		4.15	□□□□□ -1.75
GAA1	YLR088W	PRM3	Q08931	133 aa		4.15	□□□□□ -1.75
GAA1	YLR088W	YOL118C	Q08259	102 aa		4.14	□□□□□ -1.75
GAA1	YLR088W	AUA1	P32450	94 aa		4.14	□□□□□ -1.75
GAA1	YLR088W	CYT2	Q00873	224 aa		4.13	□□□□□ -1.75
GAA1	YLR088W	AGA2	P32781	87 aa		4.12	□□□□□ -1.75
GAA1	YLR088W	IMP2	P46972	177 aa		4.11	□□□□□ -1.75
GAA1	YLR088W	ICS3	P47034	131 aa		4.11	□□□□□ -1.75
GAA1	YLR088W	RPS22A	P0C0W1	130 aa	Known RBP	4.11	□□□□□ -1.75
GAA1	YLR088W	HMRA2	P0CY13	119 aa		4.1	□□□□□ -1.75
GAA1	YLR088W	ROX3	P25046	220 aa		4.1	□□□□□ -1.75
GAA1	YLR088W	YBR027C	P38220	110 aa		4.1	□□□□□ -1.75
GAA1	YLR088W	TOM6	P33448	61 aa		4.09	□□□□□ -1.75
GAA1	YLR088W	YPR108W-A	Q3E7B3	70 aa		4.09	□□□□□ -1.75
GAA1	YLR088W	YHR007C-A	Q07074	71 aa		4.08	□□□□□ -1.76
GAA1	YLR088W	YDR119W-A	Q2V2P9	66 aa		4.08	□□□□□ -1.76
GAA1	YLR088W	MPC2	P38857	129 aa		4.07	□□□□□ -1.76
GAA1	YLR088W	POR2	P40478	281 aa		4.07	□□□□□ -1.76
GAA1	YLR088W	SSS1	P35179	80 aa		4.06	□□□□□ -1.76
GAA1	YLR088W	YGL014C-A	P0C5N1	53 aa		4.05	□□□□□ -1.76
GAA1	YLR088W	MRPL38	P35996	138 aa	Predicted RBP	4.05	□□□□□ -1.76
GAA1	YLR088W	YLR285C-A	Q3E771	56 aa		4.05	□□□□□ -1.76
GAA1	YLR088W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.05	□□□□□ -1.76
GAA1	YLR088W	HUG1	Q6Q5K6	68 aa		4.05	□□□□□ -1.76
GAA1	YLR088W	NHP2	P32495	156 aa	Predicted RBP	4.03	□□□□□ -1.76
GAA1	YLR088W	YPR145C-A	Q2V2P0	78 aa		4.03	□□□□□ -1.76
GAA1	YLR088W	DSE2	P38844	325 aa		4.02	□□□□□ -1.77
GAA1	YLR088W	SWM2	P40342	146 aa		4.02	□□□□□ -1.77
GAA1	YLR088W	LST8	P41318	303 aa		4.02	□□□□□ -1.77
GAA1	YLR088W	TAR1	Q8TGM6	124 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 81.7 ms