RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W YSF3P0C074 85 aaPredicted RBP2.96□□□□□ -1.94
PRP40YKL012W HYP2P23301 157 aaKnown RBP2.96□□□□□ -1.94
PRP40YKL012W RPS22BQ3E7Y3 130 aaKnown RBP2.96□□□□□ -1.94
PRP40YKL012W YHR138CP38841 114 aaPredicted RBP2.95□□□□□ -1.94
PRP40YKL012W SPG1P50088 95 aa2.95□□□□□ -1.94
PRP40YKL012W YMR007WQ03675 126 aa2.95□□□□□ -1.94
PRP40YKL012W YNL277W-AQ3E7Z0 62 aa2.95□□□□□ -1.94
PRP40YKL012W CYB5P40312 120 aa2.95□□□□□ -1.94
PRP40YKL012W YIL163CP40448 117 aa2.95□□□□□ -1.94
PRP40YKL012W MIC27P50945 234 aa2.95□□□□□ -1.94
PRP40YKL012W YIL102C-AQ2V2P5 75 aa2.95□□□□□ -1.94
PRP40YKL012W HUG1Q6Q5K6 68 aa2.95□□□□□ -1.94
PRP40YKL012W YLR365WQ7LIF2 110 aa2.95□□□□□ -1.94
PRP40YKL012W PRM3Q08931 133 aa2.94□□□□□ -1.94
PRP40YKL012W YBR090CP38253 122 aa2.93□□□□□ -1.94
PRP40YKL012W YPR108W-AQ3E7B3 70 aa2.93□□□□□ -1.94
PRP40YKL012W HMRA1P0CY11 126 aa2.92□□□□□ -1.94
PRP40YKL012W YHR130CP38834 111 aa2.92□□□□□ -1.94
PRP40YKL012W YPR153WQ06537 140 aa2.92□□□□□ -1.94
PRP40YKL012W ATX1P38636 73 aa2.92□□□□□ -1.94
PRP40YKL012W YPR203WQ08994 102 aa2.92□□□□□ -1.94
PRP40YKL012W TRA1P38811 3744 aa2.92□□□□□ -1.94
PRP40YKL012W AQY2P0CD90 149 aa2.91□□□□□ -1.94
PRP40YKL012W UGX2P32772 223 aa2.91□□□□□ -1.94
PRP40YKL012W BRP1P53194 125 aa2.91□□□□□ -1.94
PRP40YKL012W FYV5P25585 152 aa2.9□□□□□ -1.94
PRP40YKL012W SOM1Q05676 74 aa2.9□□□□□ -1.94
PRP40YKL012W FIT3Q08907 204 aa2.9□□□□□ -1.94
PRP40YKL012W POC4Q12245 148 aaPredicted RBP2.9□□□□□ -1.94
PRP40YKL012W YIR021W-AQ3E739 70 aa2.9□□□□□ -1.94
PRP40YKL012W VAR1P02381 398 aa2.89□□□□□ -1.95
PRP40YKL012W SNF11P38956 169 aa2.89□□□□□ -1.95
PRP40YKL012W YLR296WQ05898 108 aa2.89□□□□□ -1.95
PRP40YKL012W YOL118CQ08259 102 aa2.89□□□□□ -1.95
PRP40YKL012W YOR192C-CQ3E736 78 aa2.89□□□□□ -1.95
PRP40YKL012W YCR050CP25630 102 aa2.89□□□□□ -1.95
PRP40YKL012W NHP2P32495 156 aaPredicted RBP2.89□□□□□ -1.95
PRP40YKL012W YKL023C-AQ2V2P3 75 aa2.89□□□□□ -1.95
PRP40YKL012W RAF1Q06891 181 aa2.88□□□□□ -1.95
PRP40YKL012W YHR212W-AP0CX91 67 aa2.87□□□□□ -1.95
PRP40YKL012W YKL044WP36092 106 aa2.87□□□□□ -1.95
PRP40YKL012W SFT2P38166 215 aa2.87□□□□□ -1.95
PRP40YKL012W SFT1P43682 97 aa2.87□□□□□ -1.95
PRP40YKL012W SEN1Q00416 2231 aaKnown RBP2.87□□□□□ -1.95
PRP40YKL012W HUA1P40325 198 aa2.87□□□□□ -1.95
PRP40YKL012W YHR214C-DP0CX93 97 aa2.86□□□□□ -1.95
PRP40YKL012W YHR173CP38864 112 aa2.86□□□□□ -1.95
PRP40YKL012W PAU7P39545 55 aa2.86□□□□□ -1.95
PRP40YKL012W YIL014C-AQ02598 104 aa2.86□□□□□ -1.95
PRP40YKL012W HPA2Q06592 156 aa2.86□□□□□ -1.95
PRP40YKL012W MRPL31P14063 131 aaPredicted RBP2.85□□□□□ -1.95
PRP40YKL012W YAL064WP39711 94 aa2.85□□□□□ -1.95
PRP40YKL012W TOM7P53507 60 aa2.85□□□□□ -1.95
PRP40YKL012W MIX14Q04341 121 aa2.85□□□□□ -1.95
PRP40YKL012W SDH7Q04401 133 aa2.85□□□□□ -1.95
PRP40YKL012W TOR2P32600 2474 aaKnown RBP2.85□□□□□ -1.95
PRP40YKL012W YDR042CQ03205 200 aa2.84□□□□□ -1.95
PRP40YKL012W RPA12P32529 125 aaKnown RBP2.84□□□□□ -1.96
PRP40YKL012W LST8P41318 303 aa2.84□□□□□ -1.96
PRP40YKL012W YMR103CQ04436 120 aa2.84□□□□□ -1.96
PRP40YKL012W YGL258W-AQ3E740 77 aa2.84□□□□□ -1.96
PRP40YKL012W ROX3P25046 220 aa2.83□□□□□ -1.96
PRP40YKL012W CWP2P43497 92 aa2.82□□□□□ -1.96
PRP40YKL012W YOR032W-AQ8TGS1 66 aa2.82□□□□□ -1.96
PRP40YKL012W GCN1P33892 2672 aaKnown RBP2.82□□□□□ -1.96
PRP40YKL012W YBR027CP38220 110 aa2.82□□□□□ -1.96
PRP40YKL012W YOR097CQ12274 175 aaPredicted RBP2.82□□□□□ -1.96
PRP40YKL012W YHL037CP38733 133 aa2.81□□□□□ -1.96
PRP40YKL012W LSM6Q06406 86 aaKnown RBP2.81□□□□□ -1.96
PRP40YKL012W YFL041W-AQ3E817 63 aa2.81□□□□□ -1.96
PRP40YKL012W ENV10Q99382 181 aa2.81□□□□□ -1.96
PRP40YKL012W FPR2P32472 135 aa2.8□□□□□ -1.96
PRP40YKL012W QCR10P37299 77 aa2.8□□□□□ -1.96
PRP40YKL012W VAM10Q08474 114 aa2.8□□□□□ -1.96
PRP40YKL012W DAD1Q12248 94 aa2.8□□□□□ -1.96
PRP40YKL012W YMR141CP40211 102 aa2.79□□□□□ -1.96
PRP40YKL012W YPL261CQ08976 102 aa2.79□□□□□ -1.96
PRP40YKL012W YDR119W-AQ2V2P9 66 aa2.79□□□□□ -1.96
PRP40YKL012W YDL022C-AP0C5L6 82 aa2.79□□□□□ -1.96
PRP40YKL012W YER039C-AP0CD97 72 aa2.79□□□□□ -1.96
PRP40YKL012W YCR085WP25650 117 aa2.79□□□□□ -1.96
PRP40YKL012W YFL051CP43552 160 aa2.79□□□□□ -1.96
PRP40YKL012W TEL1P38110 2787 aa2.78□□□□□ -1.96
PRP40YKL012W HMRA2P0CY13 119 aa2.78□□□□□ -1.96
PRP40YKL012W VPS55P47111 140 aa2.78□□□□□ -1.96
PRP40YKL012W MGR2Q02889 113 aa2.78□□□□□ -1.96
PRP40YKL012W YDR029WQ12111 104 aa2.78□□□□□ -1.96
PRP40YKL012W ECM12O13529 151 aa2.77□□□□□ -1.97
PRP40YKL012W UBC5P15732 148 aa2.77□□□□□ -1.97
PRP40YKL012W YBL071CP38185 102 aa2.77□□□□□ -1.97
PRP40YKL012W DCV1P43595 202 aa2.77□□□□□ -1.97
PRP40YKL012W SIP18P50263 79 aa2.77□□□□□ -1.97
PRP40YKL012W COX12Q01519 83 aa2.77□□□□□ -1.97
PRP40YKL012W YGL149WP53116 101 aa2.77□□□□□ -1.97
PRP40YKL012W GPI19Q04082 140 aa2.77□□□□□ -1.97
PRP40YKL012W PFY1P07274 126 aa2.76□□□□□ -1.97
PRP40YKL012W YMR105W-AQ8TGS8 64 aa2.76□□□□□ -1.97
PRP40YKL012W GAT4P40569 121 aa2.75□□□□□ -1.97
PRP40YKL012W TOS6P48560 102 aa2.75□□□□□ -1.97
PRP40YKL012W RPL39P04650 51 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 56.8 ms