RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A BRR2P32639 2163 aaKnown RBP1.11□□□□□ -2.23
SFT1YKL006C-A RPL37BP51402 88 aaKnown RBP1.11□□□□□ -2.23
SFT1YKL006C-A BSC4P53841 131 aa1.11□□□□□ -2.23
SFT1YKL006C-A YCR085WP25650 117 aa1.1□□□□□ -2.23
SFT1YKL006C-A YHR173CP38864 112 aa1.1□□□□□ -2.23
SFT1YKL006C-A ESP1Q03018 1630 aa1.1□□□□□ -2.23
SFT1YKL006C-A DNF3Q12674 1656 aa1.1□□□□□ -2.23
SFT1YKL006C-A YLR157W-EP0CF00 54 aa1.09□□□□□ -2.23
SFT1YKL006C-A YLR307C-AQ3E825 87 aa1.09□□□□□ -2.23
SFT1YKL006C-A TY1B-BRQ12193 1756 aa1.08□□□□□ -2.24
SFT1YKL006C-A MLP1Q02455 1875 aaKnown RBP1.08□□□□□ -2.24
SFT1YKL006C-A YOR343CQ12484 108 aa1.08□□□□□ -2.24
SFT1YKL006C-A TY1B-NL2Q99337 1749 aaKnown RBP1.08□□□□□ -2.24
SFT1YKL006C-A ECM29P38737 1868 aa1.07□□□□□ -2.24
SFT1YKL006C-A TY1B-BLQ12490 1755 aa1.07□□□□□ -2.24
SFT1YKL006C-A YER188C-AP0C0V2 99 aa1.07□□□□□ -2.24
SFT1YKL006C-A YDR010CQ12426 110 aa1.07□□□□□ -2.24
SFT1YKL006C-A YBR072C-AQ3E794 53 aa1.07□□□□□ -2.24
SFT1YKL006C-A XRN1P22147 1528 aaKnown RBP1.06□□□□□ -2.24
SFT1YKL006C-A YHR214C-DP0CX93 97 aa1.06□□□□□ -2.24
SFT1YKL006C-A PAU23Q07987 124 aa1.06□□□□□ -2.24
SFT1YKL006C-A PAU17Q12370 124 aa1.06□□□□□ -2.24
SFT1YKL006C-A YPR145C-AQ2V2P0 78 aa1.06□□□□□ -2.24
SFT1YKL006C-A YNL042W-BQ3E7Z2 85 aa1.06□□□□□ -2.24
SFT1YKL006C-A RIM15P43565 1770 aa1.06□□□□□ -2.24
SFT1YKL006C-A MMS22Q06164 1454 aa1.05□□□□□ -2.24
SFT1YKL006C-A URA2P07259 2214 aaKnown RBP1.05□□□□□ -2.24
SFT1YKL006C-A POL2P21951 2222 aaKnown RBP1.05□□□□□ -2.24
SFT1YKL006C-A FPR2P32472 135 aa1.05□□□□□ -2.24
SFT1YKL006C-A Q0032Q9ZZX7 96 aa1.05□□□□□ -2.24
SFT1YKL006C-A UTP10P42945 1769 aaKnown RBP1.04□□□□□ -2.24
SFT1YKL006C-A TOM6P33448 61 aa1.04□□□□□ -2.24
SFT1YKL006C-A PDX3P38075 228 aaKnown RBP1.04□□□□□ -2.24
SFT1YKL006C-A YBR201C-AQ2V2Q3 67 aa1.04□□□□□ -2.24
SFT1YKL006C-A TY1B-DR6P0C2I3 1755 aa1.03□□□□□ -2.24
SFT1YKL006C-A TY1B-LR2P0C2I5 1755 aa1.03□□□□□ -2.24
SFT1YKL006C-A TY1B-PR3P0C2J1 1755 aaKnown RBP1.03□□□□□ -2.24
SFT1YKL006C-A TY1B-JR2P47100 1755 aaKnown RBP1.03□□□□□ -2.24
SFT1YKL006C-A TY1B-MR1Q04214 1755 aa1.03□□□□□ -2.24
SFT1YKL006C-A TY1B-MR2Q04670 1755 aaKnown RBP1.03□□□□□ -2.24
SFT1YKL006C-A TY1B-NL1Q12112 1755 aa1.03□□□□□ -2.24
SFT1YKL006C-A TY1B-GR1Q12141 1755 aa1.03□□□□□ -2.24
SFT1YKL006C-A TY1B-GR3Q12316 1755 aa1.03□□□□□ -2.24
SFT1YKL006C-A TY1B-PLQ12414 1755 aaKnown RBP1.03□□□□□ -2.24
SFT1YKL006C-A TY1B-ORQ92393 1755 aa1.03□□□□□ -2.24
SFT1YKL006C-A YDR381C-AQ3E6R5 114 aa1.03□□□□□ -2.24
SFT1YKL006C-A NOP10Q6Q547 58 aaPredicted RBP1.03□□□□□ -2.24
SFT1YKL006C-A TY1B-LR3P0C2I6 1755 aaKnown RBP1.02□□□□□ -2.25
SFT1YKL006C-A YIL156W-BQ2V2P4 73 aa1.02□□□□□ -2.25
SFT1YKL006C-A YMR122W-AQ3E842 84 aa1.02□□□□□ -2.25
SFT1YKL006C-A MOT1P32333 1867 aa1.01□□□□□ -2.25
SFT1YKL006C-A YAL065CO13511 128 aa1.01□□□□□ -2.25
SFT1YKL006C-A YOR105WQ08504 108 aa1.01□□□□□ -2.25
SFT1YKL006C-A SNF2P22082 1703 aa1.01□□□□□ -2.25
SFT1YKL006C-A COX7P10174 60 aa1□□□□□ -2.25
SFT1YKL006C-A RPC10P40422 70 aa1□□□□□ -2.25
SFT1YKL006C-A TY1B-DR5P0C2I2 1755 aa1□□□□□ -2.25
SFT1YKL006C-A TY1B-PR1P0C2I9 1755 aaKnown RBP1□□□□□ -2.25
SFT1YKL006C-A TY1B-ER2Q03619 1755 aa1□□□□□ -2.25
SFT1YKL006C-A TY1B-DR1Q03855 1755 aa1□□□□□ -2.25
SFT1YKL006C-A TY1B-ML1Q04711 1755 aaKnown RBP1□□□□□ -2.25
SFT1YKL006C-A TY1B-LR1Q12088 1755 aaKnown RBP1□□□□□ -2.25
SFT1YKL006C-A TY1B-GR2Q12269 1755 aa1□□□□□ -2.25
SFT1YKL006C-A TY1B-DR3Q99231 1755 aa0.99□□□□□ -2.25
SFT1YKL006C-A YOR314WQ12506 109 aa0.99□□□□□ -2.25
SFT1YKL006C-A SIN3P22579 1536 aa0.99□□□□□ -2.25
SFT1YKL006C-A DOP1Q03921 1698 aa0.98□□□□□ -2.25
SFT1YKL006C-A LSM2P38203 95 aaKnown RBP0.98□□□□□ -2.25
SFT1YKL006C-A YKL065W-AQ2V2P2 73 aa0.98□□□□□ -2.25
SFT1YKL006C-A YDR119W-AQ2V2P9 66 aa0.98□□□□□ -2.25
SFT1YKL006C-A YOL164W-AQ3E7A5 60 aa0.98□□□□□ -2.25
SFT1YKL006C-A YHR213W-AQ8TGT4 77 aa0.98□□□□□ -2.25
SFT1YKL006C-A NUP159P40477 1460 aa0.98□□□□□ -2.25
SFT1YKL006C-A RPL38P49167 78 aaKnown RBP0.97□□□□□ -2.25
SFT1YKL006C-A YNL190WP53872 204 aa0.97□□□□□ -2.25
SFT1YKL006C-A ATP18P81450 59 aa0.97□□□□□ -2.25
SFT1YKL006C-A TY2B-CP25384 1770 aa0.97□□□□□ -2.25
SFT1YKL006C-A TY2B-DR1Q12472 1770 aa0.97□□□□□ -2.25
SFT1YKL006C-A STT4P37297 1900 aa0.96□□□□□ -2.26
SFT1YKL006C-A TY1B-JR1P47098 1755 aa0.96□□□□□ -2.26
SFT1YKL006C-A TY1B-ML2Q03434 1755 aaKnown RBP0.96□□□□□ -2.26
SFT1YKL006C-A TY1B-ER1Q03612 1755 aa0.96□□□□□ -2.26
SFT1YKL006C-A TY1B-OLQ12273 1755 aa0.96□□□□□ -2.26
SFT1YKL006C-A SWM2P40342 146 aa0.95□□□□□ -2.26
SFT1YKL006C-A YGR121W-AQ3E816 71 aa0.95□□□□□ -2.26
SFT1YKL006C-A FAS2P19097 1887 aaKnown RBP0.95□□□□□ -2.26
SFT1YKL006C-A YDL022C-AP0C5L6 82 aa0.94□□□□□ -2.26
SFT1YKL006C-A YJR107C-AP0CT86 78 aa0.94□□□□□ -2.26
SFT1YKL006C-A YNL198CP40166 100 aa0.94□□□□□ -2.26
SFT1YKL006C-A SGF11Q03067 99 aa0.94□□□□□ -2.26
SFT1YKL006C-A QCR9P22289 66 aa0.93□□□□□ -2.26
SFT1YKL006C-A SDH6Q3E785 79 aa0.93□□□□□ -2.26
SFT1YKL006C-A HKR1P41809 1802 aa0.92□□□□□ -2.26
SFT1YKL006C-A TIM12P32830 109 aa0.91□□□□□ -2.26
SFT1YKL006C-A TCB3Q03640 1545 aaKnown RBP0.9□□□□□ -2.26
SFT1YKL006C-A PAI3P01094 68 aa0.9□□□□□ -2.27
SFT1YKL006C-A YGR035W-AQ45U48 73 aa0.9□□□□□ -2.27
SFT1YKL006C-A TY2B-LR1P0C2J3 1770 aa0.89□□□□□ -2.27
SFT1YKL006C-A TY2B-FP0CX63 1770 aa0.89□□□□□ -2.27
SFT1YKL006C-A TY2B-GR2P0CX64 1770 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms