RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C YLR422WQ06409 1932 aa1.23□□□□□ -2.21
VPS35YJL154C YHR022CP38763 256 aa1.23□□□□□ -2.21
VPS35YJL154C DCV1P43595 202 aa1.23□□□□□ -2.21
VPS35YJL154C YNR077CP53758 84 aa1.23□□□□□ -2.21
VPS35YJL154C POP3P53833 195 aaPredicted RBP1.23□□□□□ -2.21
VPS35YJL154C YML079WQ03629 201 aa1.23□□□□□ -2.21
VPS35YJL154C PAU23Q07987 124 aa1.23□□□□□ -2.21
VPS35YJL154C YPR013CQ12145 317 aa1.23□□□□□ -2.21
VPS35YJL154C PAU17Q12370 124 aa1.23□□□□□ -2.21
VPS35YJL154C OST5Q92316 86 aa1.23□□□□□ -2.21
VPS35YJL154C MYO1P08964 1928 aa1.23□□□□□ -2.21
VPS35YJL154C YGR269WP40326 108 aa1.23□□□□□ -2.21
VPS35YJL154C YFL051CP43552 160 aa1.23□□□□□ -2.21
VPS35YJL154C PAU5P43575 122 aa1.23□□□□□ -2.21
VPS35YJL154C ICS3P47034 131 aa1.23□□□□□ -2.21
VPS35YJL154C PIR1Q03178 341 aa1.23□□□□□ -2.21
VPS35YJL154C RPL22AP05749 121 aaKnown RBP1.22□□□□□ -2.21
VPS35YJL154C YNL198CP40166 100 aa1.22□□□□□ -2.21
VPS35YJL154C BRP1P53194 125 aa1.22□□□□□ -2.21
VPS35YJL154C YPR145C-AQ2V2P0 78 aa1.22□□□□□ -2.21
VPS35YJL154C YLR236CA0A023PZG4 107 aa1.22□□□□□ -2.21
VPS35YJL154C YBR292CP38357 123 aa1.22□□□□□ -2.21
VPS35YJL154C VMA9Q3E7B6 73 aa1.22□□□□□ -2.21
VPS35YJL154C POL2P21951 2222 aaKnown RBP1.22□□□□□ -2.21
VPS35YJL154C RTC6O14464 93 aa1.21□□□□□ -2.22
VPS35YJL154C RPS22AP0C0W1 130 aaKnown RBP1.21□□□□□ -2.22
VPS35YJL154C COX23P38824 151 aa1.21□□□□□ -2.22
VPS35YJL154C DSE2P38844 325 aa1.21□□□□□ -2.22
VPS35YJL154C YIR020CP40575 100 aa1.21□□□□□ -2.22
VPS35YJL154C LST8P41318 303 aa1.21□□□□□ -2.22
VPS35YJL154C IMP2P46972 177 aa1.21□□□□□ -2.22
VPS35YJL154C MIC27P50945 234 aa1.21□□□□□ -2.22
VPS35YJL154C YLR194CQ05777 254 aa1.21□□□□□ -2.22
VPS35YJL154C YPR153WQ06537 140 aa1.21□□□□□ -2.22
VPS35YJL154C YIL046W-AQ3E7Z4 54 aa1.21□□□□□ -2.22
VPS35YJL154C LAA1P39526 2014 aa1.21□□□□□ -2.22
VPS35YJL154C FPR1P20081 114 aaKnown RBP1.21□□□□□ -2.22
VPS35YJL154C NHP2P32495 156 aaPredicted RBP1.21□□□□□ -2.22
VPS35YJL154C YHL005CP38752 130 aa1.21□□□□□ -2.22
VPS35YJL154C DAD4P69851 72 aa1.21□□□□□ -2.22
VPS35YJL154C MET31Q03081 177 aa1.21□□□□□ -2.22
VPS35YJL154C CMC4Q3E7A9 73 aa1.21□□□□□ -2.22
VPS35YJL154C RPL36BO14455 100 aaKnown RBP1.21□□□□□ -2.22
VPS35YJL154C RPL36AP05745 100 aaPredicted RBP1.21□□□□□ -2.22
VPS35YJL154C RPB7P34087 171 aa1.21□□□□□ -2.22
VPS35YJL154C YDR381C-AQ3E6R5 114 aa1.21□□□□□ -2.22
VPS35YJL154C RPS22BQ3E7Y3 130 aaKnown RBP1.21□□□□□ -2.22
VPS35YJL154C MHF2Q3E829 80 aa1.21□□□□□ -2.22
VPS35YJL154C HMRA2P0CY13 119 aa1.2□□□□□ -2.22
VPS35YJL154C ROX3P25046 220 aa1.2□□□□□ -2.22
VPS35YJL154C SRX1P36077 127 aa1.2□□□□□ -2.22
VPS35YJL154C YFL041W-AQ3E817 63 aa1.2□□□□□ -2.22
VPS35YJL154C YBR209WP38311 105 aa1.2□□□□□ -2.22
VPS35YJL154C HPA2Q06592 156 aa1.2□□□□□ -2.22
VPS35YJL154C YOR105WQ08504 108 aa1.2□□□□□ -2.22
VPS35YJL154C YDL157CQ12082 118 aa1.2□□□□□ -2.22
VPS35YJL154C BEM2P39960 2167 aaKnown RBP1.2□□□□□ -2.22
VPS35YJL154C COX8P04039 78 aa1.19□□□□□ -2.22
VPS35YJL154C QCR8P08525 94 aa1.19□□□□□ -2.22
VPS35YJL154C SEC11P15367 167 aa1.19□□□□□ -2.22
VPS35YJL154C LSM6Q06406 86 aaKnown RBP1.19□□□□□ -2.22
VPS35YJL154C YOL118CQ08259 102 aa1.19□□□□□ -2.22
VPS35YJL154C YPL038W-AQ3E7B4 63 aa1.19□□□□□ -2.22
VPS35YJL154C BRR2P32639 2163 aaKnown RBP1.19□□□□□ -2.22
VPS35YJL154C URA2P07259 2214 aaKnown RBP1.19□□□□□ -2.22
VPS35YJL154C YJL197C-AP0C5P0 93 aa1.19□□□□□ -2.22
VPS35YJL154C HSP150P32478 413 aa1.19□□□□□ -2.22
VPS35YJL154C TIM12P32830 109 aa1.19□□□□□ -2.22
VPS35YJL154C PDX3P38075 228 aaKnown RBP1.19□□□□□ -2.22
VPS35YJL154C MRP17P28778 131 aa1.18□□□□□ -2.22
VPS35YJL154C YEL014CP39999 101 aa1.18□□□□□ -2.22
VPS35YJL154C SPC1P46965 94 aa1.18□□□□□ -2.22
VPS35YJL154C FIT2Q08906 153 aa1.18□□□□□ -2.22
VPS35YJL154C YIL102C-AQ2V2P5 75 aa1.18□□□□□ -2.22
VPS35YJL154C YMR030W-AQ3E760 96 aa1.18□□□□□ -2.22
VPS35YJL154C YLR285C-AQ3E771 56 aa1.18□□□□□ -2.22
VPS35YJL154C FLO9P39712 1322 aa1.18□□□□□ -2.22
VPS35YJL154C YHR214C-DP0CX93 97 aa1.18□□□□□ -2.22
VPS35YJL154C YCR095W-AQ3E787 52 aa1.18□□□□□ -2.22
VPS35YJL154C MRPL31P14063 131 aaPredicted RBP1.17□□□□□ -2.22
VPS35YJL154C YOR343CQ12484 108 aa1.17□□□□□ -2.22
VPS35YJL154C FAS1P07149 2051 aaKnown RBP1.17□□□□□ -2.22
VPS35YJL154C COX12Q01519 83 aa1.17□□□□□ -2.22
VPS35YJL154C MRPL38P35996 138 aaPredicted RBP1.16□□□□□ -2.22
VPS35YJL154C YBR027CP38220 110 aa1.16□□□□□ -2.22
VPS35YJL154C POR2P40478 281 aa1.16□□□□□ -2.22
VPS35YJL154C SNA2P56508 79 aa1.16□□□□□ -2.22
VPS35YJL154C PAU6P0CE90 120 aa1.16□□□□□ -2.22
VPS35YJL154C PAU18P0CE91 120 aa1.16□□□□□ -2.22
VPS35YJL154C MLP1Q02455 1875 aaKnown RBP1.16□□□□□ -2.22
VPS35YJL154C YER188C-AP0C0V2 99 aa1.16□□□□□ -2.22
VPS35YJL154C YBR219CP38317 127 aa1.16□□□□□ -2.22
VPS35YJL154C SED1Q01589 338 aa1.16□□□□□ -2.22
VPS35YJL154C YOR314WQ12506 109 aa1.16□□□□□ -2.22
VPS35YJL154C PFY1P07274 126 aa1.15□□□□□ -2.23
VPS35YJL154C FPR2P32472 135 aa1.15□□□□□ -2.23
VPS35YJL154C YBL071CP38185 102 aa1.15□□□□□ -2.23
VPS35YJL154C AIM4P38305 123 aaPredicted RBP1.15□□□□□ -2.23
VPS35YJL154C MPC2P38857 129 aa1.15□□□□□ -2.23
VPS35YJL154C VPS55P47111 140 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms