RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W MTC6P38849 526 aa4.57□□□□□ -1.68
SKN1YGR143W YNL208WP40159 199 aaKnown RBP4.57□□□□□ -1.68
SKN1YGR143W CRC1Q12289 327 aa4.57□□□□□ -1.68
SKN1YGR143W HUG1Q6Q5K6 68 aa4.57□□□□□ -1.68
SKN1YGR143W API2Q04413 109 aa4.56□□□□□ -1.68
SKN1YGR143W TIM22Q12328 207 aa4.56□□□□□ -1.68
SKN1YGR143W CTR2P38865 189 aa4.56□□□□□ -1.68
SKN1YGR143W PAU7P39545 55 aa4.56□□□□□ -1.68
SKN1YGR143W ECO1P43605 281 aa4.56□□□□□ -1.68
SKN1YGR143W HSP150P32478 413 aa4.55□□□□□ -1.68
SKN1YGR143W SAP30P38429 201 aa4.55□□□□□ -1.68
SKN1YGR143W YER135CP40082 130 aa4.55□□□□□ -1.68
SKN1YGR143W YLR285C-AQ3E771 56 aa4.55□□□□□ -1.68
SKN1YGR143W YAL065CO13511 128 aa4.55□□□□□ -1.68
SKN1YGR143W YGR121W-AQ3E816 71 aa4.55□□□□□ -1.68
SKN1YGR143W RPL43AP0CX25 92 aaKnown RBP4.54□□□□□ -1.68
SKN1YGR143W RPL43BP0CX26 92 aa4.54□□□□□ -1.68
SKN1YGR143W SPI1P40092 148 aa4.54□□□□□ -1.68
SKN1YGR143W IMP2P46972 177 aa4.54□□□□□ -1.68
SKN1YGR143W YOR343CQ12484 108 aa4.54□□□□□ -1.68
SKN1YGR143W MPC2P38857 129 aa4.54□□□□□ -1.68
SKN1YGR143W NCE101Q02820 53 aa4.54□□□□□ -1.68
SKN1YGR143W YHP1Q04116 353 aa4.54□□□□□ -1.68
SKN1YGR143W YOR314WQ12506 109 aa4.54□□□□□ -1.68
SKN1YGR143W YKR032WP36127 104 aa4.53□□□□□ -1.68
SKN1YGR143W SPG1P50088 95 aa4.52□□□□□ -1.69
SKN1YGR143W EDC1P53080 175 aaPredicted RBP4.52□□□□□ -1.69
SKN1YGR143W ATP20Q12233 115 aa4.52□□□□□ -1.69
SKN1YGR143W MIG3P39943 394 aa4.52□□□□□ -1.69
SKN1YGR143W DCV1P43595 202 aa4.52□□□□□ -1.69
SKN1YGR143W TOM7P53507 60 aa4.52□□□□□ -1.69
SKN1YGR143W YLR162WQ06235 118 aa4.52□□□□□ -1.69
SKN1YGR143W YAL064W-BO13512 126 aa4.51□□□□□ -1.69
SKN1YGR143W YLR156WP0CE96 114 aa4.51□□□□□ -1.69
SKN1YGR143W YLR159WP0CE97 114 aa4.51□□□□□ -1.69
SKN1YGR143W YLR161WP0CE98 114 aa4.51□□□□□ -1.69
SKN1YGR143W YHR022CP38763 256 aa4.51□□□□□ -1.69
SKN1YGR143W NCA3P46955 337 aa4.51□□□□□ -1.69
SKN1YGR143W YGR018CP53211 109 aa4.51□□□□□ -1.69
SKN1YGR143W YOR032W-AQ8TGS1 66 aa4.51□□□□□ -1.69
SKN1YGR143W FYV5P25585 152 aa4.51□□□□□ -1.69
SKN1YGR143W YPR108W-AQ3E7B3 70 aa4.51□□□□□ -1.69
SKN1YGR143W RPL26BP53221 127 aaKnown RBP4.5□□□□□ -1.69
SKN1YGR143W SED1Q01589 338 aa4.5□□□□□ -1.69
SKN1YGR143W YOL029CQ08187 201 aa4.5□□□□□ -1.69
SKN1YGR143W YHL005CP38752 130 aa4.5□□□□□ -1.69
SKN1YGR143W HMRA2P0CY13 119 aa4.49□□□□□ -1.69
SKN1YGR143W YOL118CQ08259 102 aa4.49□□□□□ -1.69
SKN1YGR143W YFR032C-BQ8TGU2 87 aa4.49□□□□□ -1.69
SKN1YGR143W BLM10P43583 2143 aa4.49□□□□□ -1.69
SKN1YGR143W AGA1P32323 725 aa4.49□□□□□ -1.69
SKN1YGR143W MRPL39P36533 70 aa4.49□□□□□ -1.69
SKN1YGR143W WWM1P43582 211 aaKnown RBP4.49□□□□□ -1.69
SKN1YGR143W YLR194CQ05777 254 aa4.49□□□□□ -1.69
SKN1YGR143W OST5Q92316 86 aa4.49□□□□□ -1.69
SKN1YGR143W YMR122CQ03879 124 aa4.48□□□□□ -1.69
SKN1YGR143W YER188C-AP0C0V2 99 aa4.47□□□□□ -1.69
SKN1YGR143W REE1P40893 198 aa4.47□□□□□ -1.69
SKN1YGR143W COA3Q3E7B2 85 aa4.47□□□□□ -1.69
SKN1YGR143W MSA2P36157 363 aa4.46□□□□□ -1.69
SKN1YGR143W YBL071CP38185 102 aa4.46□□□□□ -1.69
SKN1YGR143W MPC3P53311 146 aa4.46□□□□□ -1.69
SKN1YGR143W YNL190WP53872 204 aa4.46□□□□□ -1.69
SKN1YGR143W PRM7Q12459 698 aa4.46□□□□□ -1.69
SKN1YGR143W YGR035W-AQ45U48 73 aa4.46□□□□□ -1.69
SKN1YGR143W YGR045CP53229 120 aa4.46□□□□□ -1.7
SKN1YGR143W MGR2Q02889 113 aa4.46□□□□□ -1.7
SKN1YGR143W FIT2Q08906 153 aa4.45□□□□□ -1.7
SKN1YGR143W SRL1Q08673 210 aa4.45□□□□□ -1.7
SKN1YGR143W YKR073CP36153 106 aa4.44□□□□□ -1.7
SKN1YGR143W YPR153WQ06537 140 aa4.44□□□□□ -1.7
SKN1YGR143W YKL065W-AQ2V2P2 73 aa4.44□□□□□ -1.7
SKN1YGR143W YOL014WQ08110 124 aa4.44□□□□□ -1.7
SKN1YGR143W NOP10Q6Q547 58 aaPredicted RBP4.44□□□□□ -1.7
SKN1YGR143W RPS23AP0CX29 145 aaKnown RBP4.43□□□□□ -1.7
SKN1YGR143W RPS23BP0CX30 145 aa4.43□□□□□ -1.7
SKN1YGR143W SEC16P48415 2195 aaKnown RBP4.43□□□□□ -1.7
SKN1YGR143W RPR2P40571 144 aa4.43□□□□□ -1.7
SKN1YGR143W QCR10P37299 77 aa4.42□□□□□ -1.7
SKN1YGR143W RGM1Q00453 211 aa4.42□□□□□ -1.7
SKN1YGR143W FYV12Q08559 129 aa4.42□□□□□ -1.7
SKN1YGR143W DAD4P69851 72 aa4.41□□□□□ -1.7
SKN1YGR143W YOR020W-AQ3E824 90 aa4.41□□□□□ -1.7
SKN1YGR143W YMR141CP40211 102 aa4.41□□□□□ -1.7
SKN1YGR143W IRC21Q04772 201 aa4.41□□□□□ -1.7
SKN1YGR143W IRC19Q07843 230 aa4.41□□□□□ -1.7
SKN1YGR143W RPL36BO14455 100 aaKnown RBP4.4□□□□□ -1.71
SKN1YGR143W RPL36AP05745 100 aaPredicted RBP4.4□□□□□ -1.71
SKN1YGR143W HOT13P36078 116 aa4.39□□□□□ -1.71
SKN1YGR143W SHU1P38751 150 aa4.39□□□□□ -1.71
SKN1YGR143W KRE9P39005 276 aa4.39□□□□□ -1.71
SKN1YGR143W TOS6P48560 102 aa4.39□□□□□ -1.71
SKN1YGR143W YER145C-AA0A023PYF4 145 aa4.38□□□□□ -1.71
SKN1YGR143W RPS30AP0CX33 63 aaKnown RBP4.38□□□□□ -1.71
SKN1YGR143W RPS30BP0CX34 63 aaKnown RBP4.38□□□□□ -1.71
SKN1YGR143W MRPS12P53732 153 aa4.38□□□□□ -1.71
SKN1YGR143W YDR182W-AQ3E796 67 aa4.38□□□□□ -1.71
SKN1YGR143W YOL166W-AQ8TGJ1 51 aa4.38□□□□□ -1.71
SKN1YGR143W ATP15P21306 62 aa4.38□□□□□ -1.71
SKN1YGR143W EDC2P40023 145 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms