RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	YBR209W	P38311	105 aa		2.57	□□□□□ -2
ECO1	YFR027W	TDA2	P40045	126 aa		2.57	□□□□□ -2
ECO1	YFR027W	IMP2	P46972	177 aa		2.57	□□□□□ -2
ECO1	YFR027W	TOS8	P53147	276 aa		2.57	□□□□□ -2
ECO1	YFR027W	ERI1	P62651	68 aa	Known RBP	2.57	□□□□□ -2
ECO1	YFR027W	YOR192C-C	Q3E736	78 aa		2.57	□□□□□ -2
ECO1	YFR027W	YOR008C-A	Q3E7B9	74 aa		2.57	□□□□□ -2
ECO1	YFR027W	RPL36B	O14455	100 aa	Known RBP	2.56	□□□□□ -2
ECO1	YFR027W	RPL36A	P05745	100 aa	Predicted RBP	2.56	□□□□□ -2
ECO1	YFR027W	YLR156W	P0CE96	114 aa		2.56	□□□□□ -2
ECO1	YFR027W	YLR159W	P0CE97	114 aa		2.56	□□□□□ -2
ECO1	YFR027W	YLR161W	P0CE98	114 aa		2.56	□□□□□ -2
ECO1	YFR027W	HUA1	P40325	198 aa		2.56	□□□□□ -2
ECO1	YFR027W	YGL034C	P53186	121 aa		2.56	□□□□□ -2
ECO1	YFR027W	PCP1	P53259	346 aa		2.56	□□□□□ -2
ECO1	YFR027W	MPC3	P53311	146 aa		2.56	□□□□□ -2
ECO1	YFR027W	MRPS12	P53732	153 aa		2.56	□□□□□ -2
ECO1	YFR027W	IRC21	Q04772	201 aa		2.56	□□□□□ -2
ECO1	YFR027W	YOR268C	Q08734	132 aa		2.56	□□□□□ -2
ECO1	YFR027W	VPS68	Q12016	184 aa		2.56	□□□□□ -2
ECO1	YFR027W	YOR381W-A	Q3E804	55 aa		2.56	□□□□□ -2
ECO1	YFR027W	YGR121W-A	Q3E816	71 aa		2.56	□□□□□ -2
ECO1	YFR027W	YBL071C	P38185	102 aa		2.55	□□□□□ -2
ECO1	YFR027W	SHU1	P38751	150 aa		2.55	□□□□□ -2
ECO1	YFR027W	YMR141C	P40211	102 aa		2.55	□□□□□ -2
ECO1	YFR027W	YGR018C	P53211	109 aa		2.55	□□□□□ -2
ECO1	YFR027W	SPG4	Q04438	115 aa		2.55	□□□□□ -2
ECO1	YFR027W	YER078W-A	Q3E7A2	54 aa		2.55	□□□□□ -2
ECO1	YFR027W	YOR376W-A	Q3E805	51 aa		2.55	□□□□□ -2
ECO1	YFR027W	NAG1	Q8TGN9	163 aa		2.55	□□□□□ -2
ECO1	YFR027W	QCR8	P08525	94 aa		2.54	□□□□□ -2
ECO1	YFR027W	ARF1	P11076	181 aa	Known RBP	2.54	□□□□□ -2
ECO1	YFR027W	YEL045C	P32616	141 aa		2.54	□□□□□ -2
ECO1	YFR027W	YGL088W	P53151	121 aa		2.54	□□□□□ -2
ECO1	YFR027W	RPL26B	P53221	127 aa	Known RBP	2.54	□□□□□ -2
ECO1	YFR027W	YOL160W	Q08321	113 aa		2.54	□□□□□ -2
ECO1	YFR027W	RNH203	Q12338	110 aa		2.54	□□□□□ -2
ECO1	YFR027W	YER188C-A	P0C0V2	99 aa		2.53	□□□□□ -2
ECO1	YFR027W	ATP15	P21306	62 aa		2.53	□□□□□ -2
ECO1	YFR027W	HSP150	P32478	413 aa		2.53	□□□□□ -2
ECO1	YFR027W	YNL208W	P40159	199 aa	Known RBP	2.53	□□□□□ -2
ECO1	YFR027W	RGM1	Q00453	211 aa		2.53	□□□□□ -2
ECO1	YFR027W	PRM7	Q12459	698 aa		2.53	□□□□□ -2
ECO1	YFR027W	YGR035W-A	Q45U48	73 aa		2.53	□□□□□ -2
ECO1	YFR027W	OST5	Q92316	86 aa		2.53	□□□□□ -2
ECO1	YFR027W	YLR236C	A0A023PZG4	107 aa		2.52	□□□□□ -2.01
ECO1	YFR027W	YJR107C-A	P0CT86	78 aa		2.52	□□□□□ -2.01
ECO1	YFR027W	MRPL39	P36533	70 aa		2.52	□□□□□ -2.01
ECO1	YFR027W	YHL037C	P38733	133 aa		2.52	□□□□□ -2.01
ECO1	YFR027W	ARC15	P40518	154 aa	RIP-Chip data	2.52	□□□□□ -2.01	not detected
ECO1	YFR027W	YNL190W	P53872	204 aa		2.52	□□□□□ -2.01
ECO1	YFR027W	YMR122C	Q03879	124 aa		2.52	□□□□□ -2.01
ECO1	YFR027W	YOR020W-A	Q3E824	90 aa		2.52	□□□□□ -2.01
ECO1	YFR027W	NOP10	Q6Q547	58 aa	Predicted RBP	2.51	□□□□□ -2.01
ECO1	YFR027W	RPS23A	P0CX29	145 aa	Known RBP	2.5	□□□□□ -2.01
ECO1	YFR027W	RPS23B	P0CX30	145 aa		2.5	□□□□□ -2.01
ECO1	YFR027W	EDC1	P53080	175 aa	Predicted RBP	2.5	□□□□□ -2.01
ECO1	YFR027W	SED1	Q01589	338 aa		2.5	□□□□□ -2.01
ECO1	YFR027W	YOL166W-A	Q8TGJ1	51 aa		2.5	□□□□□ -2.01
ECO1	YFR027W	CYR1	P08678	2026 aa	Known RBP	2.49	□□□□□ -2.01
ECO1	YFR027W	YSF3	P0C074	85 aa	Predicted RBP	2.49	□□□□□ -2.01
ECO1	YFR027W	FYV5	P25585	152 aa		2.49	□□□□□ -2.01
ECO1	YFR027W	UTH1	P36135	365 aa		2.49	□□□□□ -2.01
ECO1	YFR027W	RRT1	P38192	103 aa		2.49	□□□□□ -2.01
ECO1	YFR027W	YAL064W	P39711	94 aa		2.49	□□□□□ -2.01
ECO1	YFR027W	YIR020C	P40575	100 aa		2.49	□□□□□ -2.01
ECO1	YFR027W	YJR146W	P47174	117 aa		2.49	□□□□□ -2.01
ECO1	YFR027W	ATP18	P81450	59 aa		2.49	□□□□□ -2.01
ECO1	YFR027W	DDR48	P18899	430 aa	Known RBP	2.48	□□□□□ -2.01
ECO1	YFR027W	REE1	P40893	198 aa		2.48	□□□□□ -2.01
ECO1	YFR027W	YFL067W	P43537	175 aa		2.48	□□□□□ -2.01
ECO1	YFR027W	YPS5	P53057	165 aa		2.48	□□□□□ -2.01
ECO1	YFR027W	YMR244W	Q04018	355 aa		2.48	□□□□□ -2.01
ECO1	YFR027W	YPR153W	Q06537	140 aa		2.48	□□□□□ -2.01
ECO1	YFR027W	TMC1	Q08422	150 aa	Predicted RBP	2.48	□□□□□ -2.01
ECO1	YFR027W	CDC39	P25655	2108 aa	Known RBP	2.47	□□□□□ -2.01
ECO1	YFR027W	RPS30A	P0CX33	63 aa	Known RBP	2.47	□□□□□ -2.01
ECO1	YFR027W	RPS30B	P0CX34	63 aa	Known RBP	2.47	□□□□□ -2.01
ECO1	YFR027W	YCR041W	P37265	110 aa		2.47	□□□□□ -2.01
ECO1	YFR027W	YER135C	P40082	130 aa		2.47	□□□□□ -2.01
ECO1	YFR027W	YJL027C	P47063	138 aa	Predicted RBP	2.47	□□□□□ -2.01
ECO1	YFR027W	HUB1	Q6Q546	73 aa		2.46	□□□□□ -2.02
ECO1	YFR027W	RPS27A	P35997	82 aa	Known RBP	2.45	□□□□□ -2.02
ECO1	YFR027W	QCR10	P37299	77 aa		2.45	□□□□□ -2.02
ECO1	YFR027W	RPS27B	P38711	82 aa		2.45	□□□□□ -2.02
ECO1	YFR027W	TVP23	P38962	199 aa		2.45	□□□□□ -2.02
ECO1	YFR027W	RPL38	P49167	78 aa	Known RBP	2.44	□□□□□ -2.02
ECO1	YFR027W	YOR034C-A	Q3E735	80 aa		2.44	□□□□□ -2.02
ECO1	YFR027W	YFR009W-A	P0C5M9	85 aa		2.43	□□□□□ -2.02
ECO1	YFR027W	YEL008W	P40001	126 aa		2.43	□□□□□ -2.02
ECO1	YFR027W	YBR200W-A	Q3E755	54 aa		2.43	□□□□□ -2.02
ECO1	YFR027W	YCR095W-A	Q3E787	52 aa		2.43	□□□□□ -2.02
ECO1	YFR027W	FPR1	P20081	114 aa	Known RBP	2.42	□□□□□ -2.02
ECO1	YFR027W	COX14	P39103	70 aa		2.42	□□□□□ -2.02
ECO1	YFR027W	WWM1	P43582	211 aa	Known RBP	2.42	□□□□□ -2.02
ECO1	YFR027W	YOL014W	Q08110	124 aa		2.42	□□□□□ -2.02
ECO1	YFR027W	RPS11A	P0CX47	156 aa	Known RBP	2.41	□□□□□ -2.02
ECO1	YFR027W	RPS11B	P0CX48	156 aa	Known RBP	2.41	□□□□□ -2.02
ECO1	YFR027W	YGL149W	P53116	101 aa		2.41	□□□□□ -2.02
ECO1	YFR027W	LIP1	Q03579	150 aa		2.41	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms