RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C FSF1Q12029 327 aaKnown RBP2.4□□□□□ -2.03
OTU1YFL044C YLR050CQ12155 161 aaKnown RBP2.4□□□□□ -2.03
OTU1YFL044C MRPL24P36525 258 aaPredicted RBP2.39□□□□□ -2.03
OTU1YFL044C RPB11P38902 120 aa2.39□□□□□ -2.03
OTU1YFL044C PAU7P39545 55 aa2.39□□□□□ -2.03
OTU1YFL044C PAU5P43575 122 aa2.39□□□□□ -2.03
OTU1YFL044C DCV1P43595 202 aa2.39□□□□□ -2.03
OTU1YFL044C DAD3P69850 94 aa2.39□□□□□ -2.03
OTU1YFL044C APS2Q00381 147 aa2.39□□□□□ -2.03
OTU1YFL044C CNL1Q06333 122 aa2.39□□□□□ -2.03
OTU1YFL044C YIR021W-AQ3E739 70 aa2.39□□□□□ -2.03
OTU1YFL044C ENV10Q99382 181 aa2.39□□□□□ -2.03
OTU1YFL044C SEC4P07560 215 aaKnown RBP2.38□□□□□ -2.03
OTU1YFL044C HMRA1P0CY11 126 aa2.38□□□□□ -2.03
OTU1YFL044C YER076CP40049 302 aa2.38□□□□□ -2.03
OTU1YFL044C AIM19P40502 157 aa2.38□□□□□ -2.03
OTU1YFL044C PHS1P40857 217 aa2.38□□□□□ -2.03
OTU1YFL044C THG1P53215 237 aaKnown RBP2.38□□□□□ -2.03
OTU1YFL044C SNA2P56508 79 aa2.38□□□□□ -2.03
OTU1YFL044C YDR010CQ12426 110 aa2.38□□□□□ -2.03
OTU1YFL044C COA6Q3E846 104 aa2.38□□□□□ -2.03
OTU1YFL044C TDA8Q6B2U8 126 aa2.38□□□□□ -2.03
OTU1YFL044C FMP49A0A023PZB3 126 aa2.37□□□□□ -2.03
OTU1YFL044C MBF1O14467 151 aaKnown RBP2.37□□□□□ -2.03
OTU1YFL044C YAL064WP39711 94 aa2.37□□□□□ -2.03
OTU1YFL044C ELC1Q03071 99 aa2.37□□□□□ -2.03
OTU1YFL044C NAT3Q06504 195 aa2.37□□□□□ -2.03
OTU1YFL044C YMR175W-AQ3E766 64 aa2.37□□□□□ -2.03
OTU1YFL044C YOR020W-AQ3E824 90 aa2.37□□□□□ -2.03
OTU1YFL044C IGO2Q9P305 131 aa2.37□□□□□ -2.03
OTU1YFL044C DDR48P18899 430 aaKnown RBP2.36□□□□□ -2.03
OTU1YFL044C YKR070WP36151 352 aaKnown RBP2.36□□□□□ -2.03
OTU1YFL044C YHR130CP38834 111 aa2.36□□□□□ -2.03
OTU1YFL044C YAR029WP39549 74 aa2.36□□□□□ -2.03
OTU1YFL044C PAU15P40585 124 aa2.36□□□□□ -2.03
OTU1YFL044C YLR118CQ12354 227 aa2.36□□□□□ -2.03
OTU1YFL044C PAI3P01094 68 aa2.35□□□□□ -2.03
OTU1YFL044C PBI2P0CT04 75 aaKnown RBP2.35□□□□□ -2.03
OTU1YFL044C INO4P13902 151 aa2.35□□□□□ -2.03
OTU1YFL044C YNL198CP40166 100 aa2.35□□□□□ -2.03
OTU1YFL044C OST2P46964 130 aa2.35□□□□□ -2.03
OTU1YFL044C PAU23Q07987 124 aa2.35□□□□□ -2.03
OTU1YFL044C PAU17Q12370 124 aa2.35□□□□□ -2.03
OTU1YFL044C YGL041C-BQ3E750 60 aa2.35□□□□□ -2.03
OTU1YFL044C ECM12O13529 151 aa2.34□□□□□ -2.03
OTU1YFL044C PAU19P0CE85 124 aa2.34□□□□□ -2.03
OTU1YFL044C PAU21P0CE86 164 aa2.34□□□□□ -2.03
OTU1YFL044C PAU22P0CE87 164 aa2.34□□□□□ -2.03
OTU1YFL044C PAU3P25610 124 aa2.34□□□□□ -2.03
OTU1YFL044C YKR032WP36127 104 aa2.34□□□□□ -2.03
OTU1YFL044C YKR041WP36134 250 aa2.34□□□□□ -2.03
OTU1YFL044C YBR209WP38311 105 aa2.34□□□□□ -2.03
OTU1YFL044C YBR219CP38317 127 aa2.34□□□□□ -2.03
OTU1YFL044C YHR125WP38831 101 aa2.34□□□□□ -2.03
OTU1YFL044C VTC1P40046 129 aaRIP-Chip data2.34□□□□□ -2.03not detected
OTU1YFL044C YJR146WP47174 117 aa2.34□□□□□ -2.03
OTU1YFL044C YDL241WQ07738 123 aa2.34□□□□□ -2.03
OTU1YFL044C YDL157CQ12082 118 aa2.34□□□□□ -2.03
OTU1YFL044C YER039C-AP0CD97 72 aa2.33□□□□□ -2.04
OTU1YFL044C HYP2P23301 157 aaKnown RBP2.33□□□□□ -2.04
OTU1YFL044C HSP10P38910 106 aa2.33□□□□□ -2.04
OTU1YFL044C YGL088WP53151 121 aa2.33□□□□□ -2.04
OTU1YFL044C YOR268CQ08734 132 aa2.33□□□□□ -2.04
OTU1YFL044C SCS22Q6Q595 175 aa2.33□□□□□ -2.04
OTU1YFL044C YAL065CO13511 128 aa2.32□□□□□ -2.04
OTU1YFL044C PFY1P07274 126 aa2.32□□□□□ -2.04
OTU1YFL044C YHR032W-AP0C5N6 59 aa2.32□□□□□ -2.04
OTU1YFL044C YLR156WP0CE96 114 aa2.32□□□□□ -2.04
OTU1YFL044C YLR159WP0CE97 114 aa2.32□□□□□ -2.04
OTU1YFL044C YLR161WP0CE98 114 aa2.32□□□□□ -2.04
OTU1YFL044C YEL008WP40001 126 aa2.32□□□□□ -2.04
OTU1YFL044C YER134CP40081 178 aa2.32□□□□□ -2.04
OTU1YFL044C YFL065CP43539 102 aa2.32□□□□□ -2.04
OTU1YFL044C MGR2Q02889 113 aa2.32□□□□□ -2.04
OTU1YFL044C YPR203WQ08994 102 aa2.32□□□□□ -2.04
OTU1YFL044C YFR032C-BQ8TGU2 87 aa2.32□□□□□ -2.04
OTU1YFL044C POR1P04840 283 aaKnown RBP2.31□□□□□ -2.04
OTU1YFL044C TOS6P48560 102 aa2.31□□□□□ -2.04
OTU1YFL044C YOR008C-AQ3E7B9 74 aa2.31□□□□□ -2.04
OTU1YFL044C YGL010WP25338 174 aa2.3□□□□□ -2.04
OTU1YFL044C PAM17P36147 197 aa2.3□□□□□ -2.04
OTU1YFL044C CWP2P43497 92 aa2.29□□□□□ -2.04
OTU1YFL044C YFL019CP43576 117 aa2.29□□□□□ -2.04
OTU1YFL044C YGL230CP53074 147 aa2.29□□□□□ -2.04
OTU1YFL044C YGL149WP53116 101 aa2.29□□□□□ -2.04
OTU1YFL044C AIM11P87275 137 aa2.29□□□□□ -2.04
OTU1YFL044C COF1Q03048 143 aaKnown RBP2.29□□□□□ -2.04
OTU1YFL044C YMR295CQ03559 197 aa2.29□□□□□ -2.04
OTU1YFL044C YDL012CQ12489 107 aa2.29□□□□□ -2.04
OTU1YFL044C CMC4Q3E7A9 73 aa2.29□□□□□ -2.04
OTU1YFL044C AQY2P0CD90 149 aa2.28□□□□□ -2.04
OTU1YFL044C SEC11P15367 167 aa2.28□□□□□ -2.04
OTU1YFL044C PAU16P35994 123 aa2.28□□□□□ -2.04
OTU1YFL044C MSL1P40567 111 aaPredicted RBP2.28□□□□□ -2.04
OTU1YFL044C YGL193CP53097 103 aa2.28□□□□□ -2.04
OTU1YFL044C YGR039WP53225 103 aa2.28□□□□□ -2.04
OTU1YFL044C KRE1P17260 313 aa2.27□□□□□ -2.05
OTU1YFL044C YDR042CQ03205 200 aa2.27□□□□□ -2.05
OTU1YFL044C SHH4Q06236 168 aa2.27□□□□□ -2.05
OTU1YFL044C YLR363W-AQ3E747 85 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms