RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C YHR214C-DP0CX93 97 aa0.72□□□□□ -2.29
TCA17YEL048C BNI1P41832 1953 aa0.71□□□□□ -2.3
TCA17YEL048C NHP2P32495 156 aaPredicted RBP0.71□□□□□ -2.3
TCA17YEL048C BLM10P43583 2143 aa0.7□□□□□ -2.3
TCA17YEL048C TOM6P33448 61 aa0.7□□□□□ -2.3
TCA17YEL048C SCP1Q08873 200 aa0.7□□□□□ -2.3
TCA17YEL048C YBR201C-AQ2V2Q3 67 aa0.7□□□□□ -2.3
TCA17YEL048C YFR009W-AP0C5M9 85 aa0.68□□□□□ -2.3
TCA17YEL048C POL2P21951 2222 aaKnown RBP0.68□□□□□ -2.3
TCA17YEL048C FPR2P32472 135 aa0.67□□□□□ -2.3
TCA17YEL048C YKL068W-AQ3E826 78 aa0.67□□□□□ -2.3
TCA17YEL048C YIL134C-AQ45U18 67 aa0.67□□□□□ -2.3
TCA17YEL048C YAL065CO13511 128 aa0.66□□□□□ -2.3
TCA17YEL048C GDB1Q06625 1536 aa0.64□□□□□ -2.31
TCA17YEL048C ATP18P81450 59 aa0.64□□□□□ -2.31
TCA17YEL048C YMR082CQ04276 118 aa0.64□□□□□ -2.31
TCA17YEL048C YMR122W-AQ3E842 84 aa0.64□□□□□ -2.31
TCA17YEL048C POL1P13382 1468 aa0.63□□□□□ -2.31
TCA17YEL048C YBR016WP38216 128 aa0.63□□□□□ -2.31
TCA17YEL048C PAU23Q07987 124 aa0.63□□□□□ -2.31
TCA17YEL048C PAU17Q12370 124 aa0.63□□□□□ -2.31
TCA17YEL048C SDH6Q3E785 79 aa0.63□□□□□ -2.31
TCA17YEL048C SWR1Q05471 1514 aa0.63□□□□□ -2.31
TCA17YEL048C YRF1-1P0CX20 1796 aa0.62□□□□□ -2.31
TCA17YEL048C YRF1-5P0CX21 1796 aa0.62□□□□□ -2.31
TCA17YEL048C YRF1-8P0CX22 1796 aa0.62□□□□□ -2.31
TCA17YEL048C RIM15P43565 1770 aa0.62□□□□□ -2.31
TCA17YEL048C RPA190P10964 1664 aaKnown RBP0.62□□□□□ -2.31
TCA17YEL048C FAS2P19097 1887 aaKnown RBP0.61□□□□□ -2.31
TCA17YEL048C SGF11Q03067 99 aa0.6□□□□□ -2.31
TCA17YEL048C YOR343CQ12484 108 aa0.6□□□□□ -2.31
TCA17YEL048C YGL194C-AQ2V2P6 80 aa0.6□□□□□ -2.31
TCA17YEL048C PDR10P51533 1564 aa0.6□□□□□ -2.31
TCA17YEL048C YRF1-2P40105 1681 aa0.59□□□□□ -2.31
TCA17YEL048C MYO1P08964 1928 aa0.58□□□□□ -2.32
TCA17YEL048C TY1B-BLQ12490 1755 aa0.57□□□□□ -2.32
TCA17YEL048C YCR085WP25650 117 aa0.56□□□□□ -2.32
TCA17YEL048C YOR105WQ08504 108 aa0.56□□□□□ -2.32
TCA17YEL048C YMR175W-AQ3E766 64 aa0.56□□□□□ -2.32
TCA17YEL048C YOL097W-AQ3E7Y9 61 aa0.56□□□□□ -2.32
TCA17YEL048C SKI3P17883 1432 aaKnown RBP0.55□□□□□ -2.32
TCA17YEL048C LTE1P07866 1435 aa0.55□□□□□ -2.32
TCA17YEL048C YPR108W-AQ3E7B3 70 aa0.54□□□□□ -2.32
TCA17YEL048C NOP10Q6Q547 58 aaPredicted RBP0.54□□□□□ -2.32
TCA17YEL048C YBR032WP38223 100 aa0.52□□□□□ -2.33
TCA17YEL048C EDC1P53080 175 aaPredicted RBP0.52□□□□□ -2.33
TCA17YEL048C CWP2P43497 92 aa0.51□□□□□ -2.33
TCA17YEL048C YKL065W-AQ2V2P2 73 aa0.51□□□□□ -2.33
TCA17YEL048C YDR381C-AQ3E6R5 114 aa0.51□□□□□ -2.33
TCA17YEL048C DNF3Q12674 1656 aa0.49□□□□□ -2.33
TCA17YEL048C TAO3P40468 2376 aa0.48□□□□□ -2.33
TCA17YEL048C YGR025WP53216 100 aa0.48□□□□□ -2.33
TCA17YEL048C YIL156W-BQ2V2P4 73 aa0.47□□□□□ -2.33
TCA17YEL048C YOR314WQ12506 109 aa0.46□□□□□ -2.34
TCA17YEL048C YPR145C-AQ2V2P0 78 aa0.44□□□□□ -2.34
TCA17YEL048C YSP2Q06681 1438 aa0.44□□□□□ -2.34
TCA17YEL048C POC4Q12245 148 aaPredicted RBP0.42□□□□□ -2.34
TCA17YEL048C MMS22Q06164 1454 aa0.4□□□□□ -2.35
TCA17YEL048C YCR108CQ3E819 63 aa0.39□□□□□ -2.35
TCA17YEL048C TY1B-BRQ12193 1756 aa0.39□□□□□ -2.35
TCA17YEL048C SWM2P40342 146 aa0.37□□□□□ -2.35
TCA17YEL048C XRN1P22147 1528 aaKnown RBP0.37□□□□□ -2.35
TCA17YEL048C QCR9P22289 66 aa0.36□□□□□ -2.35
TCA17YEL048C YDR246W-AQ3E763 66 aa0.36□□□□□ -2.35
TCA17YEL048C YBL044WP38194 122 aa0.35□□□□□ -2.35
TCA17YEL048C HKR1P41809 1802 aa0.35□□□□□ -2.35
TCA17YEL048C YDL022C-AP0C5L6 82 aa0.34□□□□□ -2.36
TCA17YEL048C ATP17Q06405 101 aa0.33□□□□□ -2.36
TCA17YEL048C YLR146W-AQ2V2P1 62 aa0.33□□□□□ -2.36
TCA17YEL048C MMS1Q06211 1407 aa0.31□□□□□ -2.36
TCA17YEL048C ESC1Q03661 1658 aaKnown RBP0.31□□□□□ -2.36
TCA17YEL048C YGR121W-AQ3E816 71 aa0.31□□□□□ -2.36
TCA17YEL048C TY1B-PR2P0C2J0 1756 aa0.3□□□□□ -2.36
TCA17YEL048C OLI1P61829 76 aa0.3□□□□□ -2.36
TCA17YEL048C LSM2P38203 95 aaKnown RBP0.29□□□□□ -2.36
TCA17YEL048C SIN3P22579 1536 aa0.28□□□□□ -2.36
TCA17YEL048C ECM29P38737 1868 aa0.28□□□□□ -2.36
TCA17YEL048C SMC4Q12267 1418 aa0.28□□□□□ -2.37
TCA17YEL048C TY1B-DR6P0C2I3 1755 aa0.27□□□□□ -2.37
TCA17YEL048C TY1B-LR2P0C2I5 1755 aa0.27□□□□□ -2.37
TCA17YEL048C TY1B-PR3P0C2J1 1755 aaKnown RBP0.27□□□□□ -2.37
TCA17YEL048C TY1B-JR2P47100 1755 aaKnown RBP0.27□□□□□ -2.37
TCA17YEL048C TY1B-MR1Q04214 1755 aa0.27□□□□□ -2.37
TCA17YEL048C TY1B-MR2Q04670 1755 aaKnown RBP0.27□□□□□ -2.37
TCA17YEL048C TY1B-NL1Q12112 1755 aa0.27□□□□□ -2.37
TCA17YEL048C TY1B-GR1Q12141 1755 aa0.27□□□□□ -2.37
TCA17YEL048C TY1B-GR3Q12316 1755 aa0.27□□□□□ -2.37
TCA17YEL048C TY1B-PLQ12414 1755 aaKnown RBP0.27□□□□□ -2.37
TCA17YEL048C TY1B-ORQ92393 1755 aa0.27□□□□□ -2.37
TCA17YEL048C PAU7P39545 55 aa0.27□□□□□ -2.37
TCA17YEL048C MOT1P32333 1867 aa0.27□□□□□ -2.37
TCA17YEL048C YGR035W-AQ45U48 73 aa0.26□□□□□ -2.37
TCA17YEL048C STT4P37297 1900 aa0.26□□□□□ -2.37
TCA17YEL048C ESP1Q03018 1630 aa0.24□□□□□ -2.37
TCA17YEL048C YDR119W-AQ2V2P9 66 aa0.24□□□□□ -2.37
TCA17YEL048C TIM12P32830 109 aa0.23□□□□□ -2.37
TCA17YEL048C YKL018C-AQ3E7A7 99 aa0.23□□□□□ -2.37
TCA17YEL048C YHR213W-AQ8TGT4 77 aa0.23□□□□□ -2.37
TCA17YEL048C TY1B-DR5P0C2I2 1755 aa0.23□□□□□ -2.37
TCA17YEL048C TY1B-LR3P0C2I6 1755 aaKnown RBP0.23□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms