RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W BET1P22804 142 aa1.78□□□□□ -2.12
SNX41YDR425W RPL16BP26785 198 aaKnown RBP1.78□□□□□ -2.12
SNX41YDR425W PEX17P40155 199 aa1.78□□□□□ -2.12
SNX41YDR425W YMR175W-AQ3E766 64 aa1.78□□□□□ -2.12
SNX41YDR425W KTI11Q3E840 82 aa1.78□□□□□ -2.12
SNX41YDR425W YOR032W-AQ8TGS1 66 aa1.78□□□□□ -2.12
SNX41YDR425W YOL085CQ99345 113 aa1.78□□□□□ -2.12
SNX41YDR425W ACC1Q00955 2233 aaKnown RBP1.78□□□□□ -2.12
SNX41YDR425W RPL16AP26784 199 aaKnown RBP1.77□□□□□ -2.13
SNX41YDR425W MRPL38P35996 138 aaPredicted RBP1.77□□□□□ -2.13
SNX41YDR425W CTR2P38865 189 aa1.77□□□□□ -2.13
SNX41YDR425W GAT3Q07928 141 aa1.77□□□□□ -2.13
SNX41YDR425W YOR034C-AQ3E735 80 aa1.77□□□□□ -2.13
SNX41YDR425W YLR285C-AQ3E771 56 aa1.77□□□□□ -2.13
SNX41YDR425W POL2P21951 2222 aaKnown RBP1.77□□□□□ -2.13
SNX41YDR425W BLM10P43583 2143 aa1.77□□□□□ -2.13
SNX41YDR425W SHU1P38751 150 aa1.77□□□□□ -2.13
SNX41YDR425W YGL088WP53151 121 aa1.77□□□□□ -2.13
SNX41YDR425W YLR412C-AQ3E742 68 aa1.77□□□□□ -2.13
SNX41YDR425W YBR200W-AQ3E755 54 aa1.77□□□□□ -2.13
SNX41YDR425W YDR246W-AQ3E763 66 aa1.77□□□□□ -2.13
SNX41YDR425W BEM2P39960 2167 aaKnown RBP1.77□□□□□ -2.13
SNX41YDR425W YLR156WP0CE96 114 aa1.76□□□□□ -2.13
SNX41YDR425W YLR159WP0CE97 114 aa1.76□□□□□ -2.13
SNX41YDR425W YLR161WP0CE98 114 aa1.76□□□□□ -2.13
SNX41YDR425W YHR022CP38763 256 aa1.76□□□□□ -2.13
SNX41YDR425W ARC15P40518 154 aaRIP-Chip data1.76□□□□□ -2.13not detected
SNX41YDR425W SFT1P43682 97 aa1.76□□□□□ -2.13
SNX41YDR425W EDC1P53080 175 aaPredicted RBP1.76□□□□□ -2.13
SNX41YDR425W PBP4Q07362 185 aaKnown RBP1.76□□□□□ -2.13
SNX41YDR425W CDC39P25655 2108 aaKnown RBP1.76□□□□□ -2.13
SNX41YDR425W SEC16P48415 2195 aaKnown RBP1.76□□□□□ -2.13
SNX41YDR425W QCR8P08525 94 aa1.75□□□□□ -2.13
SNX41YDR425W UBC4P15731 148 aa1.75□□□□□ -2.13
SNX41YDR425W AIM4P38305 123 aaPredicted RBP1.75□□□□□ -2.13
SNX41YDR425W PEX22P39718 180 aa1.75□□□□□ -2.13
SNX41YDR425W YFL019CP43576 117 aa1.75□□□□□ -2.13
SNX41YDR425W YGR164WP53291 111 aa1.75□□□□□ -2.13
SNX41YDR425W YGR219WP53307 113 aa1.75□□□□□ -2.13
SNX41YDR425W RGM1Q00453 211 aa1.75□□□□□ -2.13
SNX41YDR425W IRC21Q04772 201 aa1.75□□□□□ -2.13
SNX41YDR425W YJR107C-AP0CT86 78 aa1.75□□□□□ -2.13
SNX41YDR425W RPS23AP0CX29 145 aaKnown RBP1.75□□□□□ -2.13
SNX41YDR425W RPS23BP0CX30 145 aa1.75□□□□□ -2.13
SNX41YDR425W YEL008WP40001 126 aa1.75□□□□□ -2.13
SNX41YDR425W ERI1P62651 68 aaKnown RBP1.75□□□□□ -2.13
SNX41YDR425W RRT15Q3E811 62 aa1.75□□□□□ -2.13
SNX41YDR425W TDA8Q6B2U8 126 aa1.75□□□□□ -2.13
SNX41YDR425W VPS13Q07878 3144 aa1.74□□□□□ -2.13
SNX41YDR425W SPS100P13130 326 aa1.74□□□□□ -2.13
SNX41YDR425W YAR029WP39549 74 aa1.74□□□□□ -2.13
SNX41YDR425W POR2P40478 281 aa1.74□□□□□ -2.13
SNX41YDR425W YOR268CQ08734 132 aa1.74□□□□□ -2.13
SNX41YDR425W ATP20Q12233 115 aa1.74□□□□□ -2.13
SNX41YDR425W YNL277W-AQ3E7Z0 62 aa1.74□□□□□ -2.13
SNX41YDR425W YLR236CA0A023PZG4 107 aa1.73□□□□□ -2.13
SNX41YDR425W SED1Q01589 338 aa1.73□□□□□ -2.13
SNX41YDR425W ICY1Q04329 127 aa1.73□□□□□ -2.13
SNX41YDR425W YKL183C-AQ3E765 70 aa1.73□□□□□ -2.13
SNX41YDR425W MPC3P53311 146 aa1.73□□□□□ -2.13
SNX41YDR425W RSM19P53733 91 aaPredicted RBP1.73□□□□□ -2.13
SNX41YDR425W YMR295CQ03559 197 aa1.73□□□□□ -2.13
SNX41YDR425W CCW12Q12127 133 aa1.73□□□□□ -2.13
SNX41YDR425W YCL048W-AQ2V2Q2 79 aa1.73□□□□□ -2.13
SNX41YDR425W YOR011W-AQ3E807 68 aa1.73□□□□□ -2.13
SNX41YDR425W NOP10Q6Q547 58 aaPredicted RBP1.73□□□□□ -2.13
SNX41YDR425W FAS1P07149 2051 aaKnown RBP1.73□□□□□ -2.13
SNX41YDR425W CYR1P08678 2026 aaKnown RBP1.73□□□□□ -2.13
SNX41YDR425W BRR2P32639 2163 aaKnown RBP1.72□□□□□ -2.13
SNX41YDR425W YHL037CP38733 133 aa1.72□□□□□ -2.13
SNX41YDR425W YER135CP40082 130 aa1.72□□□□□ -2.13
SNX41YDR425W YFR035CP43608 114 aa1.72□□□□□ -2.13
SNX41YDR425W RPL38P49167 78 aaKnown RBP1.72□□□□□ -2.13
SNX41YDR425W SPG4Q04438 115 aa1.72□□□□□ -2.13
SNX41YDR425W YPR013CQ12145 317 aa1.72□□□□□ -2.13
SNX41YDR425W YLL006W-AQ3E814 58 aa1.72□□□□□ -2.13
SNX41YDR425W YOR020W-AQ3E824 90 aa1.72□□□□□ -2.13
SNX41YDR425W MIC10Q96VH5 97 aa1.72□□□□□ -2.13
SNX41YDR425W GAT4P40569 121 aa1.71□□□□□ -2.14
SNX41YDR425W ICS3P47034 131 aa1.71□□□□□ -2.14
SNX41YDR425W ATP18P81450 59 aa1.71□□□□□ -2.14
SNX41YDR425W YDR115WQ04598 105 aa1.71□□□□□ -2.14
SNX41YDR425W YAL065CO13511 128 aa1.71□□□□□ -2.14
SNX41YDR425W YFR009W-AP0C5M9 85 aa1.71□□□□□ -2.14
SNX41YDR425W YBR219CP38317 127 aa1.71□□□□□ -2.14
SNX41YDR425W RSM18P40033 138 aa1.71□□□□□ -2.14
SNX41YDR425W YNL046WP53956 172 aa1.71□□□□□ -2.14
SNX41YDR425W YNL146C-AQ3E7Z1 64 aa1.71□□□□□ -2.14
SNX41YDR425W YOR381W-AQ3E804 55 aa1.71□□□□□ -2.14
SNX41YDR425W RPL26AP05743 127 aaKnown RBP1.7□□□□□ -2.14
SNX41YDR425W YHL005CP38752 130 aa1.7□□□□□ -2.14
SNX41YDR425W RPL26BP53221 127 aaKnown RBP1.7□□□□□ -2.14
SNX41YDR425W YLR162WQ06235 118 aa1.7□□□□□ -2.14
SNX41YDR425W VAM10Q08474 114 aa1.7□□□□□ -2.14
SNX41YDR425W YOL166W-AQ8TGJ1 51 aa1.7□□□□□ -2.14
SNX41YDR425W IRA2P19158 3079 aa1.7□□□□□ -2.14
SNX41YDR425W RPL36BO14455 100 aaKnown RBP1.69□□□□□ -2.14
SNX41YDR425W RPL36AP05745 100 aaPredicted RBP1.69□□□□□ -2.14
SNX41YDR425W SPT4P32914 102 aaPredicted RBP1.69□□□□□ -2.14
SNX41YDR425W YBL081WP38180 368 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms