RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W BEM2P39960 2167 aaKnown RBP3.92□□□□□ -1.78
FOB1YDR110W MRP17P28778 131 aa3.91□□□□□ -1.78
FOB1YDR110W SRX1P36077 127 aa3.91□□□□□ -1.78
FOB1YDR110W FLO9P39712 1322 aa3.9□□□□□ -1.78
FOB1YDR110W RPL33BP41056 107 aaKnown RBP3.9□□□□□ -1.78
FOB1YDR110W YDL157CQ12082 118 aa3.9□□□□□ -1.78
FOB1YDR110W FMP27Q06179 2628 aa3.9□□□□□ -1.78
FOB1YDR110W YHR214C-DP0CX93 97 aa3.9□□□□□ -1.79
FOB1YDR110W YOL118CQ08259 102 aa3.9□□□□□ -1.79
FOB1YDR110W YIL102C-AQ2V2P5 75 aa3.9□□□□□ -1.79
FOB1YDR110W RPS22BQ3E7Y3 130 aaKnown RBP3.9□□□□□ -1.79
FOB1YDR110W YOR105WQ08504 108 aa3.89□□□□□ -1.79
FOB1YDR110W HSP150P32478 413 aa3.88□□□□□ -1.79
FOB1YDR110W LSM6Q06406 86 aaKnown RBP3.88□□□□□ -1.79
FOB1YDR110W QCR8P08525 94 aa3.87□□□□□ -1.79
FOB1YDR110W TIM12P32830 109 aa3.87□□□□□ -1.79
FOB1YDR110W PDX3P38075 228 aaKnown RBP3.87□□□□□ -1.79
FOB1YDR110W CIS3P47001 227 aa3.87□□□□□ -1.79
FOB1YDR110W MHF2Q3E829 80 aa3.87□□□□□ -1.79
FOB1YDR110W COX8P04039 78 aa3.87□□□□□ -1.79
FOB1YDR110W FIT2Q08906 153 aa3.87□□□□□ -1.79
FOB1YDR110W RPL36BO14455 100 aaKnown RBP3.86□□□□□ -1.79
FOB1YDR110W RPL36AP05745 100 aaPredicted RBP3.86□□□□□ -1.79
FOB1YDR110W COX12Q01519 83 aa3.86□□□□□ -1.79
FOB1YDR110W MRPS16Q02608 121 aa3.86□□□□□ -1.79
FOB1YDR110W YEL014CP39999 101 aa3.85□□□□□ -1.79
FOB1YDR110W YOR343CQ12484 108 aa3.85□□□□□ -1.79
FOB1YDR110W IRA2P19158 3079 aa3.85□□□□□ -1.79
FOB1YDR110W HMRA2P0CY13 119 aa3.84□□□□□ -1.79
FOB1YDR110W YHR022CP38763 256 aa3.84□□□□□ -1.79
FOB1YDR110W DAD4P69851 72 aa3.84□□□□□ -1.79
FOB1YDR110W PPT2Q12036 173 aa3.84□□□□□ -1.79
FOB1YDR110W SEC11P15367 167 aa3.84□□□□□ -1.8
FOB1YDR110W MRPL31P14063 131 aaPredicted RBP3.83□□□□□ -1.8
FOB1YDR110W MRPL38P35996 138 aaPredicted RBP3.83□□□□□ -1.8
FOB1YDR110W YBR027CP38220 110 aa3.83□□□□□ -1.8
FOB1YDR110W HPA2Q06592 156 aa3.83□□□□□ -1.8
FOB1YDR110W SEN1Q00416 2231 aaKnown RBP3.82□□□□□ -1.8
FOB1YDR110W SPC1P46965 94 aa3.82□□□□□ -1.8
FOB1YDR110W VPS68Q12016 184 aa3.82□□□□□ -1.8
FOB1YDR110W YBR209WP38311 105 aa3.81□□□□□ -1.8
FOB1YDR110W TOR1P35169 2470 aa3.81□□□□□ -1.8
FOB1YDR110W KRE9P39005 276 aa3.81□□□□□ -1.8
FOB1YDR110W POR2P40478 281 aa3.81□□□□□ -1.8
FOB1YDR110W TEL1P38110 2787 aa3.8□□□□□ -1.8
FOB1YDR110W ACC1Q00955 2233 aaKnown RBP3.8□□□□□ -1.8
FOB1YDR110W YOR314WQ12506 109 aa3.8□□□□□ -1.8
FOB1YDR110W YCR095W-AQ3E787 52 aa3.8□□□□□ -1.8
FOB1YDR110W STT4P37297 1900 aa3.8□□□□□ -1.8
FOB1YDR110W CYR1P08678 2026 aaKnown RBP3.79□□□□□ -1.8
FOB1YDR110W SMX2P40204 77 aaKnown RBP3.79□□□□□ -1.8
FOB1YDR110W SED1Q01589 338 aa3.79□□□□□ -1.8
FOB1YDR110W YMR030W-AQ3E760 96 aa3.79□□□□□ -1.8
FOB1YDR110W CDC39P25655 2108 aaKnown RBP3.79□□□□□ -1.8
FOB1YDR110W PFY1P07274 126 aa3.78□□□□□ -1.8
FOB1YDR110W YER188C-AP0C0V2 99 aa3.78□□□□□ -1.8
FOB1YDR110W YHL037CP38733 133 aa3.78□□□□□ -1.8
FOB1YDR110W YLR285C-AQ3E771 56 aa3.78□□□□□ -1.8
FOB1YDR110W YGR121W-AQ3E816 71 aa3.78□□□□□ -1.8
FOB1YDR110W YAL065CO13511 128 aa3.78□□□□□ -1.8
FOB1YDR110W YER084WP40057 128 aa3.76□□□□□ -1.81
FOB1YDR110W VPS55P47111 140 aa3.76□□□□□ -1.81
FOB1YDR110W COX19Q3E731 98 aa3.76□□□□□ -1.81
FOB1YDR110W FPR2P32472 135 aa3.75□□□□□ -1.81
FOB1YDR110W YHR173CP38864 112 aa3.75□□□□□ -1.81
FOB1YDR110W MIX17Q03667 156 aa3.75□□□□□ -1.81
FOB1YDR110W IRC21Q04772 201 aa3.74□□□□□ -1.81
FOB1YDR110W POL2P21951 2222 aaKnown RBP3.74□□□□□ -1.81
FOB1YDR110W PAU6P0CE90 120 aa3.73□□□□□ -1.81
FOB1YDR110W PAU18P0CE91 120 aa3.73□□□□□ -1.81
FOB1YDR110W MPC2P38857 129 aa3.73□□□□□ -1.81
FOB1YDR110W YLR162WQ06235 118 aa3.73□□□□□ -1.81
FOB1YDR110W CSF1Q12150 2958 aa3.73□□□□□ -1.81
FOB1YDR110W SLH1P53327 1967 aaKnown RBP3.73□□□□□ -1.81
FOB1YDR110W PAU8P0CE92 120 aa3.73□□□□□ -1.81
FOB1YDR110W PAU11P0CE93 120 aa3.73□□□□□ -1.81
FOB1YDR110W YBL071CP38185 102 aa3.73□□□□□ -1.81
FOB1YDR110W PAU13P38725 120 aa3.73□□□□□ -1.81
FOB1YDR110W PAU4P53427 120 aa3.73□□□□□ -1.81
FOB1YDR110W PAU10Q03050 120 aa3.73□□□□□ -1.81
FOB1YDR110W PAU9Q3E770 120 aa3.73□□□□□ -1.81
FOB1YDR110W AIM4P38305 123 aaPredicted RBP3.72□□□□□ -1.81
FOB1YDR110W RPL26BP53221 127 aaKnown RBP3.72□□□□□ -1.81
FOB1YDR110W SNA2P56508 79 aa3.72□□□□□ -1.81
FOB1YDR110W YMR122CQ03879 124 aa3.72□□□□□ -1.81
FOB1YDR110W YDR246W-AQ3E763 66 aa3.72□□□□□ -1.81
FOB1YDR110W MRX7P53869 86 aa3.71□□□□□ -1.82
FOB1YDR110W ERI1P62651 68 aaKnown RBP3.71□□□□□ -1.82
FOB1YDR110W YKL065W-AQ2V2P2 73 aa3.71□□□□□ -1.82
FOB1YDR110W BPH1P25356 2167 aa3.7□□□□□ -1.82
FOB1YDR110W QCR9P22289 66 aa3.7□□□□□ -1.82
FOB1YDR110W YJR146WP47174 117 aa3.7□□□□□ -1.82
FOB1YDR110W IRA1P18963 3092 aa3.7□□□□□ -1.82
FOB1YDR110W YGL014C-AP0C5N1 53 aa3.7□□□□□ -1.82
FOB1YDR110W YGR035W-AQ45U48 73 aa3.7□□□□□ -1.82
FOB1YDR110W YJL144WP47009 104 aa3.69□□□□□ -1.82
FOB1YDR110W YIL156W-BQ2V2P4 73 aa3.69□□□□□ -1.82
FOB1YDR110W YSY6P38374 65 aa3.68□□□□□ -1.82
FOB1YDR110W NUM1Q00402 2748 aa3.68□□□□□ -1.82
FOB1YDR110W HFA1P32874 2273 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms