RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W RPS22BQ3E7Y3 130 aaKnown RBP1.37□□□□□ -2.19
VPS41YDR080W SPT4P32914 102 aaPredicted RBP1.36□□□□□ -2.19
VPS41YDR080W DAD2P36162 133 aa1.36□□□□□ -2.19
VPS41YDR080W APS2Q00381 147 aa1.36□□□□□ -2.19
VPS41YDR080W NTF2P33331 125 aaKnown RBP1.36□□□□□ -2.19
VPS41YDR080W HIT1P46973 164 aa1.36□□□□□ -2.19
VPS41YDR080W RPL31AP0C2H8 113 aaKnown RBP1.35□□□□□ -2.19
VPS41YDR080W SHU1P38751 150 aa1.35□□□□□ -2.19
VPS41YDR080W SMD1Q02260 146 aaPredicted RBP1.35□□□□□ -2.19
VPS41YDR080W YNL042W-BQ3E7Z2 85 aa1.35□□□□□ -2.19
VPS41YDR080W RPL26AP05743 127 aaKnown RBP1.35□□□□□ -2.19
VPS41YDR080W YHL005CP38752 130 aa1.35□□□□□ -2.19
VPS41YDR080W RPL26BP53221 127 aaKnown RBP1.35□□□□□ -2.19
VPS41YDR080W YGL194C-AQ2V2P6 80 aa1.35□□□□□ -2.19
VPS41YDR080W Q0017Q9ZZX8 53 aa1.35□□□□□ -2.19
VPS41YDR080W QCR8P08525 94 aa1.34□□□□□ -2.19
VPS41YDR080W HMRA2P0CY13 119 aa1.34□□□□□ -2.19
VPS41YDR080W COX7P10174 60 aa1.34□□□□□ -2.19
VPS41YDR080W PEX17P40155 199 aa1.34□□□□□ -2.19
VPS41YDR080W YJL144WP47009 104 aa1.34□□□□□ -2.19
VPS41YDR080W DDR2P89113 61 aa1.34□□□□□ -2.19
VPS41YDR080W CMC2Q3E7A4 109 aa1.34□□□□□ -2.19
VPS41YDR080W NHP6AP11632 93 aaKnown RBP1.33□□□□□ -2.2
VPS41YDR080W JAC1P53193 184 aa1.33□□□□□ -2.2
VPS41YDR080W VMA9Q3E7B6 73 aa1.33□□□□□ -2.2
VPS41YDR080W YNR034W-AQ3E841 98 aa1.33□□□□□ -2.2
VPS41YDR080W UGX2P32772 223 aa1.32□□□□□ -2.2
VPS41YDR080W RPS29AP41057 56 aaKnown RBP1.32□□□□□ -2.2
VPS41YDR080W FYV12Q08559 129 aa1.32□□□□□ -2.2
VPS41YDR080W UBC12P52491 188 aa1.32□□□□□ -2.2
VPS41YDR080W ERV14P53173 138 aa1.32□□□□□ -2.2
VPS41YDR080W YPL257WQ08974 193 aa1.32□□□□□ -2.2
VPS41YDR080W YLL006W-AQ3E814 58 aa1.32□□□□□ -2.2
VPS41YDR080W SEC4P07560 215 aaKnown RBP1.32□□□□□ -2.2
VPS41YDR080W YGL010WP25338 174 aa1.32□□□□□ -2.2
VPS41YDR080W PRE1P22141 198 aaKnown RBP1.31□□□□□ -2.2
VPS41YDR080W YIL014C-AQ02598 104 aa1.31□□□□□ -2.2
VPS41YDR080W YLR236CA0A023PZG4 107 aa1.31□□□□□ -2.2
VPS41YDR080W RPS29BP41058 56 aaKnown RBP1.31□□□□□ -2.2
VPS41YDR080W YOR020W-AQ3E824 90 aa1.31□□□□□ -2.2
VPS41YDR080W HTL1Q9URQ5 78 aa1.31□□□□□ -2.2
VPS41YDR080W PAM17P36147 197 aa1.3□□□□□ -2.2
VPS41YDR080W YML079WQ03629 201 aa1.3□□□□□ -2.2
VPS41YDR080W ATP15P21306 62 aa1.3□□□□□ -2.2
VPS41YDR080W YGL118CP53132 145 aa1.3□□□□□ -2.2
VPS41YDR080W YBR230W-AQ3E762 66 aa1.3□□□□□ -2.2
VPS41YDR080W YPR014CQ6B0W2 109 aa1.3□□□□□ -2.2
VPS41YDR080W RPL27BP0C2H7 136 aaKnown RBP1.29□□□□□ -2.2
VPS41YDR080W SNN1P48232 102 aa1.29□□□□□ -2.2
VPS41YDR080W WIP1Q2V2P8 89 aa1.29□□□□□ -2.2
VPS41YDR080W YKR041WP36134 250 aa1.29□□□□□ -2.2
VPS41YDR080W SFT1P43682 97 aa1.29□□□□□ -2.2
VPS41YDR080W AIM11P87275 137 aa1.29□□□□□ -2.2
VPS41YDR080W YOR072WQ08486 104 aa1.29□□□□□ -2.2
VPS41YDR080W TIM11P81449 96 aaPredicted RBP1.28□□□□□ -2.2
VPS41YDR080W ICY1Q04329 127 aa1.28□□□□□ -2.2
VPS41YDR080W MRPS12P53732 153 aa1.28□□□□□ -2.2
VPS41YDR080W YDR210WQ03482 75 aa1.28□□□□□ -2.2
VPS41YDR080W SRB6P32570 121 aa1.27□□□□□ -2.21
VPS41YDR080W GSP1P32835 219 aaKnown RBP1.27□□□□□ -2.21
VPS41YDR080W BSC4P53841 131 aa1.27□□□□□ -2.21
VPS41YDR080W YJL127C-BQ3E828 52 aa1.27□□□□□ -2.21
VPS41YDR080W FYV5P25585 152 aa1.27□□□□□ -2.21
VPS41YDR080W PAU17Q12370 124 aa1.27□□□□□ -2.21
VPS41YDR080W MSA2P36157 363 aa1.26□□□□□ -2.21
VPS41YDR080W YBR027CP38220 110 aa1.26□□□□□ -2.21
VPS41YDR080W YPL073CP40323 161 aa1.26□□□□□ -2.21
VPS41YDR080W YEL067CP39978 195 aa1.26□□□□□ -2.21
VPS41YDR080W RGM1Q00453 211 aa1.26□□□□□ -2.21
VPS41YDR080W YOL097W-AQ3E7Y9 61 aa1.26□□□□□ -2.21
VPS41YDR080W YIL002W-AQ3E7Z5 69 aa1.26□□□□□ -2.21
VPS41YDR080W RPL18AP0CX49 186 aaKnown RBP1.26□□□□□ -2.21
VPS41YDR080W RPL18BP0CX50 186 aaKnown RBP1.26□□□□□ -2.21
VPS41YDR080W MRPL11P36521 249 aaPredicted RBP1.26□□□□□ -2.21
VPS41YDR080W HPA2Q06592 156 aa1.26□□□□□ -2.21
VPS41YDR080W YLR157W-DP0CE99 70 aa1.25□□□□□ -2.21
VPS41YDR080W FUN14P18411 198 aa1.25□□□□□ -2.21
VPS41YDR080W ARL3Q02804 198 aa1.25□□□□□ -2.21
VPS41YDR080W YNL184CP53876 108 aa1.25□□□□□ -2.21
VPS41YDR080W YMR103CQ04436 120 aa1.25□□□□□ -2.21
VPS41YDR080W SHH4Q06236 168 aa1.25□□□□□ -2.21
VPS41YDR080W YHR007C-AQ07074 71 aa1.25□□□□□ -2.21
VPS41YDR080W IRC21Q04772 201 aa1.24□□□□□ -2.21
VPS41YDR080W ATP14Q12349 124 aa1.24□□□□□ -2.21
VPS41YDR080W RPL36BO14455 100 aaKnown RBP1.23□□□□□ -2.21
VPS41YDR080W NHP2P32495 156 aaPredicted RBP1.23□□□□□ -2.21
VPS41YDR080W YJR128WP47162 119 aa1.23□□□□□ -2.21
VPS41YDR080W YLR050CQ12155 161 aaKnown RBP1.23□□□□□ -2.21
VPS41YDR080W SCS22Q6Q595 175 aa1.23□□□□□ -2.21
VPS41YDR080W ATP5P09457 212 aa1.23□□□□□ -2.21
VPS41YDR080W IGO2Q9P305 131 aa1.23□□□□□ -2.21
VPS41YDR080W GSP2P32836 220 aaKnown RBP1.23□□□□□ -2.21
VPS41YDR080W FMP16Q12497 93 aa1.23□□□□□ -2.21
VPS41YDR080W VMA21P41806 77 aa1.22□□□□□ -2.21
VPS41YDR080W YPL261CQ08976 102 aa1.22□□□□□ -2.21
VPS41YDR080W YIA6P40556 373 aa1.22□□□□□ -2.21
VPS41YDR080W YJL009WP47078 108 aa1.22□□□□□ -2.21
VPS41YDR080W YGL034CP53186 121 aa1.22□□□□□ -2.21
VPS41YDR080W TDA8Q6B2U8 126 aa1.22□□□□□ -2.21
VPS41YDR080W RPL28P02406 149 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms