RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C YOL097W-AQ3E7Y9 61 aa2.15□□□□□ -2.07
RIF1YBR275C YLL006W-AQ3E814 58 aa2.15□□□□□ -2.07
RIF1YBR275C BEM2P39960 2167 aaKnown RBP2.14□□□□□ -2.07
RIF1YBR275C ATP15P21306 62 aa2.14□□□□□ -2.07
RIF1YBR275C YFR057WP43625 151 aa2.14□□□□□ -2.07
RIF1YBR275C MRX7P53869 86 aa2.14□□□□□ -2.07
RIF1YBR275C EST3Q03096 181 aa2.14□□□□□ -2.07
RIF1YBR275C SNA4Q07549 140 aa2.14□□□□□ -2.07
RIF1YBR275C YRF1-1P0CX20 1796 aa2.14□□□□□ -2.07
RIF1YBR275C YRF1-5P0CX21 1796 aa2.14□□□□□ -2.07
RIF1YBR275C YRF1-8P0CX22 1796 aa2.14□□□□□ -2.07
RIF1YBR275C HFA1P32874 2273 aa2.14□□□□□ -2.07
RIF1YBR275C YKR045CP36138 183 aa2.14□□□□□ -2.07
RIF1YBR275C YOR314WQ12506 109 aa2.14□□□□□ -2.07
RIF1YBR275C VMA3P25515 160 aa2.14□□□□□ -2.07
RIF1YBR275C YOL014WQ08110 124 aa2.14□□□□□ -2.07
RIF1YBR275C PBI2P0CT04 75 aaKnown RBP2.13□□□□□ -2.07
RIF1YBR275C SNN1P48232 102 aa2.13□□□□□ -2.07
RIF1YBR275C YPL080CQ02826 108 aa2.13□□□□□ -2.07
RIF1YBR275C YPR108W-AQ3E7B3 70 aa2.13□□□□□ -2.07
RIF1YBR275C YEL045CP32616 141 aa2.13□□□□□ -2.07
RIF1YBR275C NUP188P52593 1655 aaKnown RBP2.13□□□□□ -2.07
RIF1YBR275C RPS28BP0C0X0 67 aaKnown RBP2.13□□□□□ -2.07
RIF1YBR275C BRR2P32639 2163 aaKnown RBP2.13□□□□□ -2.07
RIF1YBR275C SEC16P48415 2195 aaKnown RBP2.12□□□□□ -2.07
RIF1YBR275C HOT13P36078 116 aa2.12□□□□□ -2.07
RIF1YBR275C DSE2P38844 325 aa2.12□□□□□ -2.07
RIF1YBR275C YDL085C-AQ3E7B7 68 aaKnown RBP2.12□□□□□ -2.07
RIF1YBR275C GLT1Q12680 2145 aaKnown RBP2.12□□□□□ -2.07
RIF1YBR275C POL2P21951 2222 aaKnown RBP2.12□□□□□ -2.07
RIF1YBR275C YPR170W-BP0C5R9 85 aa2.12□□□□□ -2.07
RIF1YBR275C RPC10P40422 70 aa2.12□□□□□ -2.07
RIF1YBR275C ATP17Q06405 101 aa2.12□□□□□ -2.07
RIF1YBR275C AIM4P38305 123 aaPredicted RBP2.12□□□□□ -2.07
RIF1YBR275C YAL067W-AQ8TGK6 75 aa2.12□□□□□ -2.07
RIF1YBR275C SMX3P54999 86 aaPredicted RBP2.12□□□□□ -2.07
RIF1YBR275C YMR001C-AQ8TGS9 76 aa2.12□□□□□ -2.07
RIF1YBR275C YEL008WP40001 126 aa2.11□□□□□ -2.07
RIF1YBR275C RPS28AQ3E7X9 67 aaPredicted RBP2.11□□□□□ -2.07
RIF1YBR275C YGR121W-AQ3E816 71 aa2.11□□□□□ -2.07
RIF1YBR275C YHL037CP38733 133 aa2.11□□□□□ -2.07
RIF1YBR275C URA2P07259 2214 aaKnown RBP2.11□□□□□ -2.07
RIF1YBR275C MEC1P38111 2368 aa2.1□□□□□ -2.07
RIF1YBR275C YJL027CP47063 138 aaPredicted RBP2.09□□□□□ -2.07
RIF1YBR275C YOR029WQ12243 111 aa2.09□□□□□ -2.07
RIF1YBR275C YGR164WP53291 111 aa2.09□□□□□ -2.08
RIF1YBR275C URB1P34241 1764 aaKnown RBP2.08□□□□□ -2.08
RIF1YBR275C YPR195CQ06594 109 aa2.08□□□□□ -2.08
RIF1YBR275C YBR032WP38223 100 aa2.08□□□□□ -2.08
RIF1YBR275C SLO1Q3E784 85 aa2.08□□□□□ -2.08
RIF1YBR275C LAA1P39526 2014 aa2.08□□□□□ -2.08
RIF1YBR275C PRP8P33334 2413 aaKnown RBP2.07□□□□□ -2.08
RIF1YBR275C MBF1O14467 151 aaKnown RBP2.07□□□□□ -2.08
RIF1YBR275C YEL067CP39978 195 aa2.07□□□□□ -2.08
RIF1YBR275C YGR025WP53216 100 aa2.07□□□□□ -2.08
RIF1YBR275C YFR009W-AP0C5M9 85 aa2.07□□□□□ -2.08
RIF1YBR275C YHR213WP0CI67 198 aa2.07□□□□□ -2.08
RIF1YBR275C RPL36AP05745 100 aaPredicted RBP2.06□□□□□ -2.08
RIF1YBR275C YCR050CP25630 102 aa2.06□□□□□ -2.08
RIF1YBR275C YBR219CP38317 127 aa2.06□□□□□ -2.08
RIF1YBR275C PFY1P07274 126 aa2.06□□□□□ -2.08
RIF1YBR275C RGM1Q00453 211 aa2.06□□□□□ -2.08
RIF1YBR275C YCR095W-AQ3E787 52 aa2.06□□□□□ -2.08
RIF1YBR275C YFR032C-BQ8TGU2 87 aa2.06□□□□□ -2.08
RIF1YBR275C HUA1P40325 198 aa2.06□□□□□ -2.08
RIF1YBR275C YNL122CP53921 115 aaPredicted RBP2.06□□□□□ -2.08
RIF1YBR275C ATP19P81451 68 aa2.06□□□□□ -2.08
RIF1YBR275C YOL085CQ99345 113 aa2.06□□□□□ -2.08
RIF1YBR275C YLR285C-AQ3E771 56 aa2.06□□□□□ -2.08
RIF1YBR275C QRI5P32344 111 aa2.05□□□□□ -2.08
RIF1YBR275C YGR269WP40326 108 aa2.05□□□□□ -2.08
RIF1YBR275C YOL118CQ08259 102 aa2.05□□□□□ -2.08
RIF1YBR275C TOR2P32600 2474 aaKnown RBP2.05□□□□□ -2.08
RIF1YBR275C TY2B-DR3Q07791 1770 aaKnown RBP2.05□□□□□ -2.08
RIF1YBR275C ATP18P81450 59 aa2.05□□□□□ -2.08
RIF1YBR275C BLM10P43583 2143 aa2.05□□□□□ -2.08
RIF1YBR275C YLR412C-AQ3E742 68 aa2.05□□□□□ -2.08
RIF1YBR275C RPS30AP0CX33 63 aaKnown RBP2.04□□□□□ -2.08
RIF1YBR275C RPS30BP0CX34 63 aaKnown RBP2.04□□□□□ -2.08
RIF1YBR275C YGL235WP53071 178 aa2.04□□□□□ -2.08
RIF1YBR275C MRPS12P53732 153 aa2.04□□□□□ -2.08
RIF1YBR275C YMR103CQ04436 120 aa2.04□□□□□ -2.08
RIF1YBR275C YOR034C-AQ3E735 80 aa2.04□□□□□ -2.08
RIF1YBR275C YBR200W-AQ3E755 54 aa2.04□□□□□ -2.08
RIF1YBR275C USO1P25386 1790 aa2.04□□□□□ -2.08
RIF1YBR275C YKL065W-AQ2V2P2 73 aa2.03□□□□□ -2.08
RIF1YBR275C YSY6P38374 65 aa2.03□□□□□ -2.08
RIF1YBR275C YFL065CP43539 102 aa2.03□□□□□ -2.08
RIF1YBR275C CUE4Q04201 117 aaPredicted RBP2.03□□□□□ -2.08
RIF1YBR275C YPR203WQ08994 102 aa2.03□□□□□ -2.08
RIF1YBR275C TOR1P35169 2470 aa2.03□□□□□ -2.09
RIF1YBR275C YNL190WP53872 204 aa2.02□□□□□ -2.09
RIF1YBR275C TY2B-LR1P0C2J3 1770 aa2.02□□□□□ -2.09
RIF1YBR275C TY2B-FP0CX63 1770 aa2.02□□□□□ -2.09
RIF1YBR275C TY2B-GR2P0CX64 1770 aa2.02□□□□□ -2.09
RIF1YBR275C TY2B-CP25384 1770 aa2.02□□□□□ -2.09
RIF1YBR275C TY2B-DR2Q03494 1770 aa2.02□□□□□ -2.09
RIF1YBR275C TY2B-OR1Q12113 1770 aa2.02□□□□□ -2.09
RIF1YBR275C TY2B-DR1Q12472 1770 aa2.02□□□□□ -2.09
RIF1YBR275C TY2B-BQ12491 1770 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 138.2 ms