RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 YJR107C-AP0CT86 78 aa0.91□□□□□ -2.26
NME1NME1 PDX3P38075 228 aaKnown RBP0.91□□□□□ -2.26
NME1NME1 YBR016WP38216 128 aa0.91□□□□□ -2.26
NME1NME1 SUS1Q6WNK7 96 aa0.91□□□□□ -2.26
NME1NME1 YFR009W-AP0C5M9 85 aa0.9□□□□□ -2.27
NME1NME1 COX7P10174 60 aa0.9□□□□□ -2.27
NME1NME1 YPL225WQ08971 146 aaKnown RBP0.9□□□□□ -2.27
NME1NME1 Q0032Q9ZZX7 96 aa0.9□□□□□ -2.27
NME1NME1 BSC4P53841 131 aa0.85□□□□□ -2.27
NME1NME1 YDR042CQ03205 200 aa0.84□□□□□ -2.27
NME1NME1 YDR029WQ12111 104 aa0.84□□□□□ -2.27
NME1NME1 TY1B-BRQ12193 1756 aa0.82□□□□□ -2.28
NME1NME1 DNF3Q12674 1656 aa0.81□□□□□ -2.28
NME1NME1 YBR201C-AQ2V2Q3 67 aa0.8□□□□□ -2.28
NME1NME1 MHF2Q3E829 80 aa0.79□□□□□ -2.28
NME1NME1 POL1P13382 1468 aa0.73□□□□□ -2.29
NME1NME1 YIL134C-AQ45U18 67 aa0.72□□□□□ -2.29
NME1NME1 NHP2P32495 156 aaPredicted RBP0.71□□□□□ -2.3
NME1NME1 TOM6P33448 61 aa0.71□□□□□ -2.3
NME1NME1 GDB1Q06625 1536 aa0.69□□□□□ -2.3
NME1NME1 PDR10P51533 1564 aa0.67□□□□□ -2.3
NME1NME1 YHR214C-DP0CX93 97 aa0.66□□□□□ -2.3
NME1NME1 YMR122W-AQ3E842 84 aa0.65□□□□□ -2.31
NME1NME1 SWR1Q05471 1514 aa0.64□□□□□ -2.31
NME1NME1 SGF11Q03067 99 aa0.63□□□□□ -2.31
NME1NME1 YAL065CO13511 128 aa0.61□□□□□ -2.31
NME1NME1 YCL001W-BQ96VH2 84 aa0.61□□□□□ -2.31
NME1NME1 SCP1Q08873 200 aa0.6□□□□□ -2.31
NME1NME1 YCR075W-AQ3E830 75 aa0.59□□□□□ -2.31
NME1NME1 TY1B-PR2P0C2J0 1756 aa0.56□□□□□ -2.32
NME1NME1 ATP18P81450 59 aa0.55□□□□□ -2.32
NME1NME1 ECM12O13529 151 aa0.53□□□□□ -2.32
NME1NME1 FPR2P32472 135 aa0.53□□□□□ -2.32
NME1NME1 YMR082CQ04276 118 aa0.53□□□□□ -2.32
NME1NME1 SDH6Q3E785 79 aa0.53□□□□□ -2.32
NME1NME1 TY1B-DR6P0C2I3 1755 aa0.48□□□□□ -2.33
NME1NME1 TY1B-LR2P0C2I5 1755 aa0.48□□□□□ -2.33
NME1NME1 TY1B-PR3P0C2J1 1755 aaKnown RBP0.48□□□□□ -2.33
NME1NME1 TY1B-JR2P47100 1755 aaKnown RBP0.48□□□□□ -2.33
NME1NME1 TY1B-MR1Q04214 1755 aa0.48□□□□□ -2.33
NME1NME1 TY1B-MR2Q04670 1755 aaKnown RBP0.48□□□□□ -2.33
NME1NME1 TY1B-NL1Q12112 1755 aa0.48□□□□□ -2.33
NME1NME1 TY1B-GR1Q12141 1755 aa0.48□□□□□ -2.33
NME1NME1 TY1B-GR3Q12316 1755 aa0.48□□□□□ -2.33
NME1NME1 TY1B-PLQ12414 1755 aaKnown RBP0.48□□□□□ -2.33
NME1NME1 TY1B-ORQ92393 1755 aa0.48□□□□□ -2.33
NME1NME1 PAU23Q07987 124 aa0.47□□□□□ -2.33
NME1NME1 PAU17Q12370 124 aa0.47□□□□□ -2.33
NME1NME1 HKR1P41809 1802 aa0.46□□□□□ -2.34
NME1NME1 TY1B-LR3P0C2I6 1755 aaKnown RBP0.45□□□□□ -2.34
NME1NME1 YKL068W-AQ3E826 78 aa0.41□□□□□ -2.34
NME1NME1 ECM29P38737 1868 aa0.39□□□□□ -2.35
NME1NME1 YMR175W-AQ3E766 64 aa0.36□□□□□ -2.35
NME1NME1 YDR381C-AQ3E6R5 114 aa0.34□□□□□ -2.36
NME1NME1 YOR343CQ12484 108 aa0.33□□□□□ -2.36
NME1NME1 MOT1P32333 1867 aa0.33□□□□□ -2.36
NME1NME1 YCR085WP25650 117 aa0.32□□□□□ -2.36
NME1NME1 STT4P37297 1900 aa0.3□□□□□ -2.36
NME1NME1 NOP10Q6Q547 58 aaPredicted RBP0.3□□□□□ -2.36
NME1NME1 YGR025WP53216 100 aa0.29□□□□□ -2.36
NME1NME1 EDC1P53080 175 aaPredicted RBP0.28□□□□□ -2.36
NME1NME1 YPR108W-AQ3E7B3 70 aa0.27□□□□□ -2.37
NME1NME1 YOL097W-AQ3E7Y9 61 aa0.26□□□□□ -2.37
NME1NME1 YBR032WP38223 100 aa0.23□□□□□ -2.37
NME1NME1 YGL194C-AQ2V2P6 80 aa0.22□□□□□ -2.37
NME1NME1 YCR108CQ3E819 63 aa0.21□□□□□ -2.38
NME1NME1 XRN1P22147 1528 aaKnown RBP0.21□□□□□ -2.38
NME1NME1 TY1B-DR5P0C2I2 1755 aa0.18□□□□□ -2.38
NME1NME1 TY1B-PR1P0C2I9 1755 aaKnown RBP0.18□□□□□ -2.38
NME1NME1 TY1B-JR1P47098 1755 aa0.18□□□□□ -2.38
NME1NME1 TY1B-ML2Q03434 1755 aaKnown RBP0.18□□□□□ -2.38
NME1NME1 TY1B-ER1Q03612 1755 aa0.18□□□□□ -2.38
NME1NME1 TY1B-ER2Q03619 1755 aa0.18□□□□□ -2.38
NME1NME1 TY1B-DR1Q03855 1755 aa0.18□□□□□ -2.38
NME1NME1 TY1B-ML1Q04711 1755 aaKnown RBP0.18□□□□□ -2.38
NME1NME1 TY1B-LR1Q12088 1755 aaKnown RBP0.18□□□□□ -2.38
NME1NME1 TY1B-GR2Q12269 1755 aa0.18□□□□□ -2.38
NME1NME1 TY1B-OLQ12273 1755 aa0.18□□□□□ -2.38
NME1NME1 TY1B-DR3Q99231 1755 aa0.18□□□□□ -2.38
NME1NME1 BPH1P25356 2167 aa0.17□□□□□ -2.38
NME1NME1 YIL156W-BQ2V2P4 73 aa0.17□□□□□ -2.38
NME1NME1 LTE1P07866 1435 aa0.14□□□□□ -2.39
NME1NME1 YOR105WQ08504 108 aa0.12□□□□□ -2.39
NME1NME1 UTP10P42945 1769 aaKnown RBP0.11□□□□□ -2.39
NME1NME1 YBR056W-AI2HB52 66 aa0.11□□□□□ -2.39
NME1NME1 YSP2Q06681 1438 aa0.07□□□□□ -2.4
NME1NME1 ESC1Q03661 1658 aaKnown RBP0.02□□□□□ -2.41
NME1NME1 YKL065W-AQ2V2P2 73 aa0.02□□□□□ -2.41
NME1NME1 PMD1P32634 1753 aa0.01□□□□□ -2.41
NME1NME1 YBL044WP38194 122 aa0.01□□□□□ -2.41
NME1NME1 SEN1Q00416 2231 aaKnown RBP0.01□□□□□ -2.41
NME1NME1 CWP2P43497 92 aa-0.02□□□□□ -2.41
NME1NME1 YDR246W-AQ3E763 66 aa-0.02□□□□□ -2.41
NME1NME1 MDN1Q12019 4910 aaKnown RBP-0.05□□□□□ -2.42
NME1NME1 YOR314WQ12506 109 aa-0.07□□□□□ -2.42
NME1NME1 POC4Q12245 148 aaPredicted RBP-0.08□□□□□ -2.42
NME1NME1 YPR145C-AQ2V2P0 78 aa-0.08□□□□□ -2.42
NME1NME1 MMS1Q06211 1407 aa-0.1□□□□□ -2.43
NME1NME1 FMP27Q06179 2628 aa-0.15□□□□□ -2.43
NME1NME1 YDL022C-AP0C5L6 82 aa-0.16□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 95.7 ms