RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ZSWIM1Q9BR11 485 aa20.67■□□□□ 0.9
CIRBP-220ENST00000588917 MAGED2Q9UNF1 606 aaPredicted RBP20.67■□□□□ 0.9
CIRBP-220ENST00000588917 USP15Q9Y4E8 981 aaPredicted RBP20.67■□□□□ 0.9
CIRBP-220ENST00000588917 BZW2Q9Y6E2 419 aaKnown RBP20.67■□□□□ 0.9
CIRBP-220ENST00000588917 LRRC53A6NM62 1247 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 TNFRSF10BO14763 440 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 RHOP08100 348 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 ALADP13716 330 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 YWHAQP27348 245 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 PLA2G4AP47712 749 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 ARID5AQ03989 594 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 ASIC2Q16515 512 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 SDHAF4Q5VUM1 108 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 IRF2BP2Q7Z5L9 587 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 ZMIZ2Q8NF64 920 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 EPS8L1Q8TE68 723 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 SLC35F5Q8WV83 523 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 KCTD13Q8WZ19 329 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 SLITRK1Q96PX8 696 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 GCNAQ96QF7 691 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 TTLL2Q9BWV7 592 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 ACP6Q9NPH0 428 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 CYLDQ9NQC7 956 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 TMEM30AQ9NV96 361 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.66■□□□□ 0.9
CIRBP-220ENST00000588917 IL37Q9NZH6 218 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 ZMYM5Q9UJ78 669 aa20.66■□□□□ 0.9
CIRBP-220ENST00000588917 SOBPA7XYQ1 873 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 GYPCP04921 128 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 HMGA1P17096 107 aaKnown RBP20.65■□□□□ 0.9
CIRBP-220ENST00000588917 FSHRP23945 695 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 CDC25CP30307 473 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 CASP14P31944 242 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 GPD2P43304 727 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 ACADSBP45954 432 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 CDR2Q01850 454 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 SMAD2Q15796 467 aaKnown RBP20.65■□□□□ 0.9
CIRBP-220ENST00000588917 PIGZQ86VD9 579 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 TMEM35BQ8NCS4 154 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 PDZD8Q8NEN9 1154 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 OR8K1Q8NGG5 319 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 OVCA2Q8WZ82 227 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 LRRC4Q9HBW1 653 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 PRKAG3Q9UGI9 489 aa20.65■□□□□ 0.9
CIRBP-220ENST00000588917 MRPS23Q9Y3D9 190 aaKnown RBP20.65■□□□□ 0.9
CIRBP-220ENST00000588917 ZFP37Q9Y6Q3 630 aaPredicted RBP20.65■□□□□ 0.9
CIRBP-220ENST00000588917 CLUHO75153 1309 aa20.64■□□□□ 0.89
CIRBP-220ENST00000588917 HHLA1C9JL84 531 aa20.64■□□□□ 0.89
CIRBP-220ENST00000588917 LSM8O95777 96 aaKnown RBP20.64■□□□□ 0.89
CIRBP-220ENST00000588917 CALCAP01258 141 aa20.64■□□□□ 0.89
CIRBP-220ENST00000588917 MYL4P12829 197 aa20.64■□□□□ 0.89
CIRBP-220ENST00000588917 SLC5A3P53794 718 aa20.64■□□□□ 0.89
CIRBP-220ENST00000588917 TRIM72Q6ZMU5 477 aa20.64■□□□□ 0.89
CIRBP-220ENST00000588917 TMC6Q7Z403 805 aa20.64■□□□□ 0.89
CIRBP-220ENST00000588917 NOP9Q86U38 636 aaKnown RBP20.64■□□□□ 0.89
CIRBP-220ENST00000588917 CNGA4Q8IV77 575 aa20.64■□□□□ 0.89
CIRBP-220ENST00000588917 DRC7Q8IY82 874 aa20.64■□□□□ 0.89
CIRBP-220ENST00000588917 DDX1Q92499 740 aaKnown RBP20.64■□□□□ 0.89
CIRBP-220ENST00000588917 SECISBP2LQ93073 1101 aaKnown RBP20.64■□□□□ 0.89
CIRBP-220ENST00000588917 LRRC3Q9BY71 257 aa20.64■□□□□ 0.89
CIRBP-220ENST00000588917 ZNHIT6Q9NWK9 470 aaKnown RBP20.64■□□□□ 0.89
CIRBP-220ENST00000588917 HCFC1R1Q9NWW0 138 aa20.64■□□□□ 0.89
CIRBP-220ENST00000588917 PRR33A8MZF0 331 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 GABRR2P28476 465 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 PRKCIP41743 596 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 KIF11P52732 1056 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 MTMR3Q13615 1198 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 ARHGAP15Q53QZ3 475 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 RAB41Q5JT25 222 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 DENND1BQ6P3S1 775 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 TMC8Q8IU68 726 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 HS6ST3Q8IZP7 471 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 ACSF2Q96CM8 615 aaPredicted RBP20.63■□□□□ 0.89
CIRBP-220ENST00000588917 AGPAT1Q99943 283 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 TRPM5Q9NZQ8 1165 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 NOCTQ9UK39 431 aaKnown RBP20.63■□□□□ 0.89
CIRBP-220ENST00000588917 USTQ9Y2C2 406 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 USP3Q9Y6I4 520 aa20.63■□□□□ 0.89
CIRBP-220ENST00000588917 FAM92AA1XBS5 289 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 AKR1B15C9JRZ8 316 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-220ENST00000588917 ADCY5O95622 1261 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 F11P03951 625 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 CDC25BP30305 580 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 PSEN1P49768 467 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 ZP2Q05996 745 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 KLHL30Q0D2K2 578 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 TBX2Q13207 712 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-220ENST00000588917 TAF3Q5VWG9 929 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 PPP1R2P3Q6NXS1 205 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 PMF1Q6P1K2 205 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 OTOP3Q7RTS5 596 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-220ENST00000588917 ADHFE1Q8IWW8 467 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 SIX6OS1Q8N1H7 587 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 ARHGAP18Q8N392 663 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 MSANTD4Q8NCY6 345 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 MRPS31Q92665 395 aaKnown RBP20.62■□□□□ 0.89
CIRBP-220ENST00000588917 PHF7Q9BWX1 381 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-220ENST00000588917 MIS12Q9H081 205 aa20.62■□□□□ 0.89
CIRBP-220ENST00000588917 ATXN3LQ9H3M9 355 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms