RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 SMOQ99835 787 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 EBF3Q9H4W6 596 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 LMAN1LQ9HAT1 526 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 GCNT4Q9P109 453 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 KIAA1468Q9P260 1216 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 CHORDC1Q9UHD1 332 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-219ENST00000580540 CACNA1HO95180 2353 aa17.63■□□□□ 0.41
SREBF1-219ENST00000580540 SPECC1L-ADORA2AF8WAN1 911 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 CILPO75339 1184 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 BEST1O76090 585 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 FAM200BP0CF97 657 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 PPP3CCP48454 512 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 SLC5A3P53794 718 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 MTF1Q14872 753 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 ITPRIPL2Q3MIP1 535 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 CREBRFQ8IUR6 639 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 RIN3Q8TB24 985 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 SH3RF2Q8TEC5 729 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 WHAMMQ8TF30 809 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 SLC35C1Q96A29 364 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 ARID3AQ99856 593 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 CISHQ9NSE2 258 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 MYH10P35580 1976 aa17.62■□□□□ 0.41
SREBF1-219ENST00000580540 LAMTOR5O43504 91 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 ARSAP15289 507 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 CTHP32929 405 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 IFNAR2P48551 515 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 RUNX3Q13761 415 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 TXNDC11Q6PKC3 985 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 RALGPS2Q86X27 583 aaPredicted RBP17.61■□□□□ 0.41
SREBF1-219ENST00000580540 TRIML1Q8N9V2 468 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 ZMIZ2Q8NF64 920 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 CLDN23Q96B33 292 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 MSANTD3Q96H12 275 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 HNRNPABQ99729 332 aaKnown RBP17.61■□□□□ 0.41
SREBF1-219ENST00000580540 FAM83CQ9BQN1 747 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 SRRTQ9BXP5 876 aaKnown RBP17.61■□□□□ 0.41
SREBF1-219ENST00000580540 DUS2Q9NX74 493 aaKnown RBP17.61■□□□□ 0.41
SREBF1-219ENST00000580540 SMPD4Q9NXE4 827 aa17.61■□□□□ 0.41
SREBF1-219ENST00000580540 ANAPC1Q9H1A4 1944 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 TNFRSF10BO14763 440 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 MBL2P11226 248 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-219ENST00000580540 MAGEA9P43362 315 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 FMO5P49326 533 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 MLLT6P55198 1093 aaPredicted RBP17.6■□□□□ 0.41
SREBF1-219ENST00000580540 FZD5Q13467 585 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 PON2Q15165 354 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 PDGFRLQ15198 375 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 ZNF77Q15935 545 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 TTC39CQ8N584 583 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 PDZD8Q8NEN9 1154 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 RNF38Q9H0F5 515 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 HPS4Q9NQG7 708 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 GMIPQ9P107 970 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 ARHGAP26Q9UNA1 814 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 COQ4Q9Y3A0 265 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 WNT6Q9Y6F9 365 aa17.6■□□□□ 0.41
SREBF1-219ENST00000580540 CACNA1IQ9P0X4 2223 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 LEFTY2O00292 366 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 PFKLP17858 780 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
SREBF1-219ENST00000580540 RPS9P46781 194 aaKnown RBP17.59■□□□□ 0.41
SREBF1-219ENST00000580540 USP4Q13107 963 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 CUL2Q13617 745 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 PPP1R26Q5T8A7 1209 aaPredicted RBP17.59■□□□□ 0.41
SREBF1-219ENST00000580540 C1orf228Q6PIY5 440 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 CLEC20AQ6ZU45 233 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 OSCP1Q8WVF1 389 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 TMEM176AQ96HP8 235 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 FAXDC2Q96IV6 333 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 CLSTN2Q9H4D0 955 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 CSNK1G1Q9HCP0 422 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 RBM12Q9NTZ6 932 aaKnown RBP17.59■□□□□ 0.41
SREBF1-219ENST00000580540 COMMD8Q9NX08 183 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 CPQQ9Y646 472 aa17.59■□□□□ 0.41
SREBF1-219ENST00000580540 COL4A2P08572 1712 aa17.58■□□□□ 0.41
SREBF1-219ENST00000580540 SCAMP3O14828 347 aaKnown RBP17.58■□□□□ 0.4
SREBF1-219ENST00000580540 FGFR1OPO95684 399 aaKnown RBP17.58■□□□□ 0.4
SREBF1-219ENST00000580540 GNA14O95837 355 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 CHRNB1P11230 501 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 ACO1P21399 889 aaKnown RBP17.58■□□□□ 0.4
SREBF1-219ENST00000580540 RAD23BP54727 409 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 YWHAEP62258 255 aaKnown RBP17.58■□□□□ 0.4
SREBF1-219ENST00000580540 SLC7A9P82251 487 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 CSTF1Q05048 431 aaKnown RBP17.58■□□□□ 0.4
SREBF1-219ENST00000580540 CETN1Q12798 172 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 MTAPQ13126 283 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 LRRC32Q14392 662 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 HECTD3Q5T447 861 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 FOXR2Q6PJQ5 311 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 ZNF687Q8N1G0 1237 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 CPA6Q8N4T0 437 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 SLC4A11Q8NBS3 891 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 OVCA2Q8WZ82 227 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 NT5C1BQ96P26 610 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 NACA2Q9H009 215 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 LINC00597Q9H2U6 94 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 FBXO44Q9H4M3 255 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 R4GN57 208 aa17.58■□□□□ 0.4
SREBF1-219ENST00000580540 KIF26AQ9ULI4 1882 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms