RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	SLC15A3	Q8IY34	581 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	COLGALT2	Q8IYK4	626 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	CPEB3	Q8NE35	698 aa	Known RBP	3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	TMEM171	Q8WVE6	324 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	EXTL1	Q92935	676 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	BOD1	Q96IK1	185 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	C20orf173	Q96LM9	149 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	C8orf49	Q96NF6	230 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PRPF18	Q99633	342 aa	Known RBP	3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SORBS1	Q9BX66	1292 aa	Known RBP	3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	MAGEH1	Q9H213	219 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	FAM83D	Q9H4H8	585 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	GALNT9	Q9HCQ5	603 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	NECTIN3	Q9NQS3	549 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SCAF8	Q9UPN6	1271 aa	Known RBP	3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	DGKB	Q9Y6T7	804 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	DNMT1	P26358	1616 aa	Known RBP	3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	NES	P48681	1621 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SPATA31E1	Q6ZUB1	1445 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SPATA31A3	Q5VYP0	1347 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	LAMC3	Q9Y6N6	1575 aa		3.68	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	POLA1	P09884	1462 aa	Predicted RBP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	FER1L4	A9Z1Z3	1794 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	WDR62	O43379	1518 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	TOPBP1	Q92547	1522 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	UNC119B	A6NIH7	251 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	MARCH11	A6NNE9	402 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SYT5	O00445	386 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PLSCR1	O15162	318 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	CDKL5	O76039	1030 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	USP1	O94782	785 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	FGA	P02671	866 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	CSF1R	P07333	972 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	HSPA5	P11021	654 aa	Known RBP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	HGF	P14210	728 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	EGR1	P18146	543 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PAX3	P23760	479 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	DDX6	P26196	483 aa	Known RBP eCLIP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	ADORA2A	P29274	412 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PPIF	P30405	207 aa	Known RBP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PRKAR1B	P31321	381 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SERPINF1	P36955	418 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	VAV2	P52735	878 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	JAG1	P78504	1218 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PRKG1	Q13976	671 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PTK2B	Q14289	1009 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	TIGD6	Q17RP2	521 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	BEAN1	Q3B7T3	259 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	USP39	Q53GS9	565 aa	Known RBP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	DEPDC1	Q5TB30	811 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	MANEAL	Q5VSG8	457 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	ICE2	Q659A1	982 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	ARL6IP4	Q66PJ3	421 aa	Known RBP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SFRP4	Q6FHJ7	346 aa	Predicted RBP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	MRNIP	Q6NTE8	343 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	ZNF276	Q8N554	614 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	IL17D	Q8TAD2	202 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	FAM71B	Q8TC56	605 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	ZNF384	Q8TF68	577 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	TBC1D20	Q96BZ9	403 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	ZBTB45	Q96K62	511 aa	Predicted RBP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	NELL2	Q99435	816 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	TPSD1	Q9BZJ3	242 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	TRIM5	Q9C035	493 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	AMBRA1	Q9C0C7	1298 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SLC25A32	Q9H2D1	315 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	EPS8L2	Q9H6S3	715 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	UNKL	Q9H9P5	680 aa	Known RBP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	INTS13	Q9NVM9	706 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PARPBP	Q9NWS1	579 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SMPD4	Q9NXE4	827 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SSX2IP	Q9Y2D8	614 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	CROCC2	H7BZ55	1655 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	MIA2	Q96PC5	1412 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	KDM5C	P41229	1560 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	BCORL1	Q5H9F3	1711 aa		3.67	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	MTUS2	Q5JR59	1369 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	DHX29	Q7Z478	1369 aa	Known RBP	3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PPM1D	O15297	605 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	CD3EAP	O15446	510 aa	Known RBP	3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	ASNA1	O43681	348 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	CCNT2	O60583	730 aa	Known RBP	3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	LMNA	P02545	664 aa	Known RBP	3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PDHA1	P08559	390 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SRGAP2B	P0DMP2	458 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PPP3CB	P16298	524 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	NR4A1	P22736	598 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	ZFP36	P26651	326 aa	Known RBP	3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	MST1	P26927	711 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	NTSR1	P30989	418 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	UQCRC1	P31930	480 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	PGD	P52209	483 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SLC25A3	Q00325	362 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	SP2	Q02086	613 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	CCNI	Q14094	377 aa		3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	R3HDM1	Q15032	1099 aa	Known RBP	3.66	□□□□□ -1.82
CALCOCO2-216	ENST00000509784	POSTN	Q15063	836 aa		3.66	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms