RNA–Protein interactions for RNA: ENST00000496805.5

PEF1-208, Transcript of penta-EF-hand domain containing 1, human

TSL 5

Gene PEF1, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PEF1-208	ENST00000496805	RNASEL	Q05823	741 aa	Known RBP	13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	NOMO2	Q5JPE7	1267 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	C9orf57	Q5W0N0	161 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	SPOPL	Q6IQ16	392 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	GLB1L	Q6UWU2	654 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	AGMO	Q6ZNB7	445 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	GLYCTK	Q8IVS8	523 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	ZNF687	Q8N1G0	1237 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	KAT5	Q92993	513 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	TATDN2	Q93075	761 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	C18orf25	Q96B23	403 aa	Predicted RBP	13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	HPDL	Q96IR7	371 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	CCDC42	Q96M95	316 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	ZFP42	Q96MM3	310 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	CHP1	Q99653	195 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	ARID3A	Q99856	593 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	HERC2P3	Q9BVR0	1158 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	CHRD	Q9H2X0	955 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	SMOC1	Q9H4F8	434 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.71	□□□□□ -0.21	3e-12	■■■■■ 49.5
PEF1-208	ENST00000496805	MARCH5	Q9NX47	278 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	CDH7	Q9ULB5	785 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	NDRG2	Q9UN36	371 aa	Known RBP	13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	AGAP1	Q9UPQ3	857 aa		13.71	□□□□□ -0.21
PEF1-208	ENST00000496805	SCN1A	P35498	2009 aa		13.71	□□□□□ -0.22
PEF1-208	ENST00000496805	ATP8B3	O60423	1300 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	ANO9	A1A5B4	782 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	GOLGA6L9	A6NEM1	432 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	EIF3CL	B5ME19	914 aa	Known RBP	13.7	□□□□□ -0.22
PEF1-208	ENST00000496805		F8W810	466 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	FOXN3	O00409	490 aa	Predicted RBP	13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	ZSCAN12	O43309	604 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	CST3	P01034	146 aa	Predicted RBP	13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	SOD2	P04179	222 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	UROD	P06132	367 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	TH	P07101	528 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	PNMA6A	P0CW24	399 aa	Predicted RBP	13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	KRT5	P13647	590 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	ACO1	P21399	889 aa	Known RBP	13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	PDE6C	P51160	858 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	TNNC1	P63316	161 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	ARID5A	Q03989	594 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	MTF1	Q14872	753 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	STPG1	Q5TH74	334 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	TOGARAM2	Q6ZUX3	1019 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	IRF2BP2	Q7Z5L9	587 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	PALB2	Q86YC2	1186 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	TXLNB	Q8N3L3	684 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	FAM160A2	Q8N612	972 aa	Predicted RBP	13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	UBR7	Q8N806	425 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	URGCP	Q8TCY9	931 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	B3GALT6	Q96L58	329 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	GAD1	Q99259	594 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	EIF3C	Q99613	913 aa	Known RBP	13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	PRKD2	Q9BZL6	878 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	CYP3A43	Q9HB55	503 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	LUC7L	Q9NQ29	371 aa	Known RBP	13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	CNTN6	Q9UQ52	1028 aa		13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.7	□□□□□ -0.22
PEF1-208	ENST00000496805	NUP205	Q92621	2012 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	TGM5	O43548	720 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	AKR1B10	O60218	316 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	OFD1	O75665	1012 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	LCA5L	O95447	670 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	PLEK	P08567	350 aa	Predicted RBP	13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	PAX3	P23760	479 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	EIF4A3	P38919	411 aa	Known RBP	13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	TAF6	P49848	677 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	SCNN1G	P51170	649 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	ZNF132	P52740	706 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	BPIFB4	P59827	614 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	KRT83	P78385	493 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	PTK2	Q05397	1052 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	ADCY1	Q08828	1119 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	ZNF252P-AS1	Q0IIN9	211 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	SPA17	Q15506	151 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	ASTE1	Q2TB18	679 aa	Predicted RBP	13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	WDR72	Q3MJ13	1102 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	SV2C	Q496J9	727 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	SCARA5	Q6ZMJ2	495 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	CCAR2	Q8N163	923 aa	Known RBP	13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	GSTCD	Q8NEC7	633 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	EPS8L1	Q8TE68	723 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	FGF13	Q92913	245 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	UROC1	Q96N76	676 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	CXCL16	Q9H2A7	254 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	HAUS4	Q9H6D7	363 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	PPP2R2C	Q9Y2T4	447 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	ADGRG1	Q9Y653	693 aa		13.69	□□□□□ -0.22
PEF1-208	ENST00000496805	TMEM8B	A6NDV4	472 aa		13.68	□□□□□ -0.22
PEF1-208	ENST00000496805	PIR	O00625	290 aa		13.68	□□□□□ -0.22
PEF1-208	ENST00000496805	ZNF500	O60304	480 aa	Predicted RBP	13.68	□□□□□ -0.22
PEF1-208	ENST00000496805	RPL9	P32969	192 aa	Known RBP	13.68	□□□□□ -0.22
PEF1-208	ENST00000496805	USP8	P40818	1118 aa		13.68	□□□□□ -0.22
PEF1-208	ENST00000496805	NRL	P54845	237 aa		13.68	□□□□□ -0.22

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