RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ARHGAP26Q9UNA1 814 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 FRMD4BQ9Y2L6 1034 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 PCDHA5Q9Y5H7 936 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 WNT6Q9Y6F9 365 aa18.13■□□□□ 0.49
BRCC3-202ENST00000340647 FAM92AA1XBS5 289 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 ANTXRLA6NF34 631 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 USP17L7P0C7H9 530 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 CCDC130P13994 396 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 HDCP19113 662 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 INCA1Q0VD86 236 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 EDRF1Q3B7T1 1238 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 COBLL1Q53SF7 1204 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 INTS8Q75QN2 995 aaKnown RBP18.12■□□□□ 0.49
BRCC3-202ENST00000340647 DCLK2Q8N568 766 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 SH3RF2Q8TEC5 729 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 OSCP1Q8WVF1 389 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 TAF4BQ92750 862 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 RMDN1Q96DB5 314 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 THG1LQ9NWX6 298 aaKnown RBP18.12■□□□□ 0.49
BRCC3-202ENST00000340647 ZSCAN32Q9NX65 697 aa18.12■□□□□ 0.49
BRCC3-202ENST00000340647 HHLA1C9JL84 531 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 TRDMT1O14717 391 aaKnown RBP18.11■□□□□ 0.49
BRCC3-202ENST00000340647 GADD45BO75293 160 aaPredicted RBP18.11■□□□□ 0.49
BRCC3-202ENST00000340647 CKMP06732 381 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 CD44P16070 742 aaKnown RBP18.11■□□□□ 0.49
BRCC3-202ENST00000340647 BMP6P22004 513 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 GJA4P35212 333 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 PSMC2P35998 433 aaKnown RBP18.11■□□□□ 0.49
BRCC3-202ENST00000340647 PIK3CAP42336 1068 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 SLC7A9P82251 487 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 ZNF658Q5TYW1 1059 aaPredicted RBP18.11■□□□□ 0.49
BRCC3-202ENST00000340647 C1orf228Q6PIY5 440 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 NUP93Q8N1F7 819 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 SPEM1Q8N4L4 309 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 CCDC47Q96A33 483 aaKnown RBP18.11■□□□□ 0.49
BRCC3-202ENST00000340647 ZFRQ96KR1 1074 aaKnown RBP18.11■□□□□ 0.49
BRCC3-202ENST00000340647 ECT2Q9H8V3 914 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 CSNK1G1Q9HCP0 422 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 POLR3BQ9NW08 1133 aaPredicted RBP18.11■□□□□ 0.49
BRCC3-202ENST00000340647 PCDHGA2Q9Y5H1 932 aa18.11■□□□□ 0.49
BRCC3-202ENST00000340647 TRIM49BA6NDI0 452 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 LEFTY2O00292 366 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 KIF20AO95235 890 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 PAPSS2O95340 614 aaPredicted RBP18.1■□□□□ 0.49
BRCC3-202ENST00000340647 ZDHHC11BP0C7U3 371 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 ANXA13P27216 316 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 GALK1P51570 392 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 DGKKQ5KSL6 1271 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 ANKRD40Q6AI12 368 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 GPRIN1Q7Z2K8 1008 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 SLC2A14Q8TDB8 520 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 WBP2Q969T9 261 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 TIGD1Q96MW7 591 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 GSDMAQ96QA5 445 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 IER2Q9BTL4 223 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 MMRN2Q9H8L6 949 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 TMEM8AQ9HCN3 771 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 TRPM5Q9NZQ8 1165 aa18.1■□□□□ 0.49
BRCC3-202ENST00000340647 CHORDC1Q9UHD1 332 aaPredicted RBP18.1■□□□□ 0.49
BRCC3-202ENST00000340647 MYO18AQ92614 2054 aaKnown RBP18.1■□□□□ 0.49
BRCC3-202ENST00000340647 MED19A0JLT2 244 aaPredicted RBP18.09■□□□□ 0.49
BRCC3-202ENST00000340647 EGFP01133 1207 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 PFKLP17858 780 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 SLC5A3P53794 718 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 IFRD2Q12894 506 aaPredicted RBP18.09■□□□□ 0.49
BRCC3-202ENST00000340647 PDGFRLQ15198 375 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 CBWD6Q4V339 395 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 CBWD3Q5JTY5 395 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 CBWD5Q5RIA9 395 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 SNX30Q5VWJ9 437 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 ZC3H14Q6PJT7 736 aaKnown RBP18.09■□□□□ 0.49
BRCC3-202ENST00000340647 UNC93AQ86WB7 457 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 TNIP3Q96KP6 325 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 EPC1Q9H2F5 836 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 KRT82Q9NSB4 513 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 FAM49BQ9NUQ9 324 aa18.09■□□□□ 0.49
BRCC3-202ENST00000340647 DUS2Q9NX74 493 aaKnown RBP18.09■□□□□ 0.49
BRCC3-202ENST00000340647 SPAG17Q6Q759 2223 aa18.08■□□□□ 0.49
BRCC3-202ENST00000340647 RALGAPA1Q6GYQ0 2036 aa18.08■□□□□ 0.49
BRCC3-202ENST00000340647 SCAMP3O14828 347 aaKnown RBP18.08■□□□□ 0.48
BRCC3-202ENST00000340647 CILPO75339 1184 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 AP1G2O75843 785 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 CHRM1P11229 460 aaPredicted RBP18.08■□□□□ 0.48
BRCC3-202ENST00000340647 RPL13P26373 211 aaKnown RBP18.08■□□□□ 0.48
BRCC3-202ENST00000340647 YWHAQP27348 245 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 CXCL12P48061 93 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 CCR3P51677 355 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 MESP2Q0VG99 397 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 LRRC32Q14392 662 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 CLEC20AQ6ZU45 233 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 KIAA2013Q8IYS2 634 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 TATDN2Q93075 761 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 SMARCD1Q96GM5 515 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 ARID3AQ99856 593 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 DMAP1Q9NPF5 467 aaPredicted RBP18.08■□□□□ 0.48
BRCC3-202ENST00000340647 MAN1B1Q9UKM7 699 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 CPQQ9Y646 472 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 CEP250Q9BV73 2442 aa18.08■□□□□ 0.48
BRCC3-202ENST00000340647 COCHO43405 550 aa18.07■□□□□ 0.48
BRCC3-202ENST00000340647 HRO43593 1189 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms