RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 TMEM53Q6P2H8 277 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 PALB2Q86YC2 1186 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 PQLC1Q8N2U9 271 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 DIS3LQ8TF46 1054 aaKnown RBP17.25■□□□□ 0.35
PACS1-201ENST00000320580 FAM20AQ96MK3 541 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 KRT82Q9NSB4 513 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 PARVAQ9NVD7 372 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 MED1Q15648 1581 aaPredicted RBP17.25■□□□□ 0.35
PACS1-201ENST00000320580 GNGT2O14610 69 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 RARBP10826 455 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 THRAP10827 490 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 CYP11B1P15538 503 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 SLC5A3P53794 718 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 PSMC6P62333 389 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 TCP10Q12799 353 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 MFSD14BQ5SR56 506 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 MCUQ8NE86 351 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 CALML6Q8TD86 181 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 GATA6Q92908 595 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 MECRQ9BV79 373 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 GTSE1Q9NYZ3 720 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 A0A087WXM4 84 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 RIMBP2O15034 1052 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 ADAMTS3O15072 1205 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 RBP3P10745 1247 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 MYCLP12524 364 aaPredicted RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 ARPC4P59998 168 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 TMEM119Q4V9L6 283 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 PDCD4Q53EL6 469 aaKnown RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 C6orf52Q5T4I8 152 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 PADI6Q6TGC4 694 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 DACH2Q96NX9 599 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 OSBPL6Q9BZF3 934 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 OCEL1Q9H607 264 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 LIN28AQ9H9Z2 209 aaKnown RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 DKK3Q9UBP4 350 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 SHOC2Q9UQ13 582 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 LTN1O94822 1766 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 ZNF804BA4D1E1 1349 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 TTLL13PA6NNM8 815 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 GOLGA8TH3BQL2 631 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 H3BSA7 217 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 OAS1P00973 400 aaKnown RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 PPATQ06203 517 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 SMTNL2Q2TAL5 461 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 SLC26A11Q86WA9 606 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 HPS6Q86YV9 775 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 PAF1Q8N7H5 531 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 ZC3H15Q8WU90 426 aaKnown RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 HPS1Q92902 700 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 CYTH3O43739 400 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 UFL1O94874 794 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 KRT3P12035 628 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 CDO1Q16878 200 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 ZNF772Q68DY9 489 aaPredicted RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 MIPEPQ99797 713 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 GPATCH1Q9BRR8 931 aaKnown RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 GCOM2Q9BZD3 368 aaPredicted RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 ZHX2Q9Y6X8 837 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 FSCN2O14926 492 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 DLGAP3O95886 979 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 EIF2AK2P19525 551 aaKnown RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 MSX2P35548 267 aaPredicted RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 FASTKD5Q7L8L6 764 aaKnown RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 KMT5AQ9NQR1 393 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 HSPBP1Q9NZL4 362 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 GNEQ9Y223 722 aaKnown RBP17.24■□□□□ 0.35
PACS1-201ENST00000320580 TTLL3Q9Y4R7 772 aa17.24■□□□□ 0.35
PACS1-201ENST00000320580 TOPAZ1Q8N9V7 1692 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 ZBTB11O95625 1053 aaPredicted RBP17.23■□□□□ 0.35
PACS1-201ENST00000320580 RPA1P27694 616 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 SOX11P35716 441 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 FAXCQ5TGI0 409 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 ANKRD23Q86SG2 305 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 ARHGEF19Q8IW93 802 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 NUP93Q8N1F7 819 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 NEDD1Q8NHV4 660 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 CNDP1Q96KN2 507 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 COQ7Q99807 217 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 SH2D3AQ9BRG2 576 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 PI4K2AQ9BTU6 479 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 TRIM15Q9C019 465 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 DDX56Q9NY93 547 aaKnown RBP17.23■□□□□ 0.35
PACS1-201ENST00000320580 MID2Q9UJV3 735 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 SPAG6O75602 509 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 CSPG5O95196 566 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 ELK3P41970 407 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 SFT2D3Q587I9 215 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 FAM172AQ8WUF8 416 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 NRG4Q8WWG1 115 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 KAT5Q92993 513 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 CSRNP1Q96S65 589 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 CDY2AQ9Y6F7 541 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 CDY1Q9Y6F8 540 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 SAC3D1A6NKF1 404 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 AP3B1O00203 1094 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 FASTKD3Q14CZ7 662 aaKnown RBP17.23■□□□□ 0.35
PACS1-201ENST00000320580 SBK1Q52WX2 424 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 CLEC10AQ8IUN9 316 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 SMYD1Q8NB12 490 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms