RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Fbxw11Q5SRY7 542 aaKnown RBP12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Usp7Q6A4J8 1103 aa12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 FukQ7TMC8 1090 aa12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Sephs1Q8BH69 392 aa12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Ephb1Q8CBF3 984 aa12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Lrrc66Q8K0B3 872 aa12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Prmt7Q922X9 692 aa12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Cyp4f13Q99N19 523 aa12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 PrameQ9D4Z5 464 aa12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Myo1hQ9D6A1 958 aa12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Poc5Q9DBS8 558 aa12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Map3k20Q9ESL4 802 aaKnown RBP12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Sart3Q9JLI8 962 aaKnown RBP12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Dnajb9Q9QYI6 222 aa12.15□□□□□ -0.46
Hmgb1-202ENSMUST00000093196 Sptbn1Q62261 2363 aaKnown RBP12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Fn1P11276 2477 aaKnown RBP12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 PtprdQ64487 1912 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Gm11549A0A286YD83 63 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Gnai2P08752 355 aaKnown RBP12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Zfp13P10754 512 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Wnt11P48615 354 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Ampd1Q3V1D3 745 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Lcp1Q61233 627 aaKnown RBP12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Srd5a1Q68FF9 255 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Rab11fip4Q8BQP8 635 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Fam214bQ8BR27 538 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Tceal3Q8R0A5 200 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Nxnl1Q8VC33 217 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 NpntQ91V88 561 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Zdhhc7Q91WU6 308 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Pcdhb6Q91XZ4 772 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Mrpl11Q9CQF0 192 aaKnown RBP12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Mms19Q9D071 1031 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 4930578G10RikQ9D4Q4 153 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Arih2Q9Z1K6 492 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 AtrQ9JKK8 2635 aa12.14□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 AgrnA2ASQ1 1950 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 PbsnO08976 174 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Fcn1O70165 334 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 JchainP01592 159 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Tyro3P55144 880 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Kcnab2P62482 367 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Gpr143P70259 405 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Uhmk1P97343 419 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Ccsmst1Q6RUT7 136 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Trmt61aQ80XC2 290 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Rnf168Q80XJ2 565 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Slc15a5Q8CBB2 566 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Mknk2Q8CDB0 459 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 DpydQ8CHR6 1025 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Tmem161aQ8VCA6 480 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Kdm4bQ91VY5 1086 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Rpl17Q9CPR4 184 aaKnown RBP12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Ifrd2Q9D8U0 441 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Slc6a14Q9JMA9 638 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Rad1Q9QWZ1 280 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Cldn14Q9Z0S3 239 aa12.13□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Abca2P41234 2434 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Cacna1eQ61290 2272 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Ccdc88cQ6VGS5 2009 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Lrrc3cA0A1B0GRI5 255 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Gm12695A2AGB2 545 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Atf6F6VAN0 656 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Lta4hP24527 611 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 HexaP29416 528 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 March5Q3KNM2 278 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Gpr174Q3U507 335 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Gtpbp2Q3UJK4 602 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Ice2Q3UZ18 988 aaKnown RBP12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Ankrd40Q5SUE8 363 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Tex2Q6ZPJ0 1128 aaKnown RBP12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Dnajc6Q80TZ3 938 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Ercc6lQ8BHK9 1240 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Wdr27Q8C5V5 780 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Lin9Q8C735 542 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Zdhhc3Q8R173 299 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Vopp1Q8R1C3 172 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 McmbpQ8R3C0 642 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Pcdhb18Q91Y02 792 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 RnmtQ9D0L8 465 aaKnown RBP12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Mgat4dQ9D4R2 373 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Slc22a17Q9D9E0 401 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Tmem47Q9JJG6 181 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Atg2bQ80XK6 2075 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Vps13cQ8BX70 3748 aa12.12□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Ccdc171E9Q1U1 1324 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Gm3095E9Q058 166 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Yjefn3F6W8I0 251 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 SprtnG3X912 497 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Gm4758L7N258 96 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Timm44O35857 452 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Actn3O88990 900 aaKnown RBP12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 GrnP28798 589 aaKnown RBP12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Cdc25cP48967 447 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Senp1P59110 640 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Nrp1P97333 923 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 ptchd1Q14B62 888 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Rsph3aQ3UFY4 516 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Bcar1Q61140 874 aa12.11□□□□□ -0.47
Hmgb1-202ENSMUST00000093196 Cfap97Q6ZPR1 541 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms