Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm25239-201ENSMUST00000174915 86 ntBASIC37.9■■■■□ 3.66
Pcdhb6Q91XZ4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Pcdhb6Q91XZ4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
Pcdhb6Q91XZ4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Pcdhb6Q91XZ4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.37■■■■□ 3.09
Pcdhb6Q91XZ4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Pcdhb6Q91XZ4 Gm15042-201ENSMUST00000120212 883 ntBASIC33.67■■■□□ 2.98
Pcdhb6Q91XZ4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Pcdhb6Q91XZ4 Gm15045-201ENSMUST00000117359 883 ntBASIC33.07■■■□□ 2.88
Pcdhb6Q91XZ4 Psd-208ENSMUST00000224556 2034 ntBASIC33.04■■■□□ 2.88
Pcdhb6Q91XZ4 Gm24109-201ENSMUST00000175489 103 ntBASIC32.62■■■□□ 2.81
Pcdhb6Q91XZ4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Pcdhb6Q91XZ4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.44■■■□□ 2.78
Pcdhb6Q91XZ4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Pcdhb6Q91XZ4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Pcdhb6Q91XZ4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Pcdhb6Q91XZ4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Pcdhb6Q91XZ4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pcdhb6Q91XZ4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Pcdhb6Q91XZ4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pcdhb6Q91XZ4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pcdhb6Q91XZ4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Pcdhb6Q91XZ4 Gm23366-201ENSMUST00000175022 89 ntBASIC31.71■■■□□ 2.67
Pcdhb6Q91XZ4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pcdhb6Q91XZ4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.62■■■□□ 2.65
Pcdhb6Q91XZ4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pcdhb6Q91XZ4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pcdhb6Q91XZ4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Pcdhb6Q91XZ4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pcdhb6Q91XZ4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Pcdhb6Q91XZ4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Pcdhb6Q91XZ4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.26■■■□□ 2.59
Pcdhb6Q91XZ4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pcdhb6Q91XZ4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Pcdhb6Q91XZ4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pcdhb6Q91XZ4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Pcdhb6Q91XZ4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Pcdhb6Q91XZ4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.9■■■□□ 2.54
Pcdhb6Q91XZ4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.53
Pcdhb6Q91XZ4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Pcdhb6Q91XZ4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.7■■■□□ 2.5
Pcdhb6Q91XZ4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Pcdhb6Q91XZ4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.43■■■□□ 2.46
Pcdhb6Q91XZ4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Pcdhb6Q91XZ4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Pcdhb6Q91XZ4 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.37■■■□□ 2.45
Pcdhb6Q91XZ4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Pcdhb6Q91XZ4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Pcdhb6Q91XZ4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.1■■■□□ 2.41
Pcdhb6Q91XZ4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pcdhb6Q91XZ4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Pcdhb6Q91XZ4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Pcdhb6Q91XZ4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Pcdhb6Q91XZ4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pcdhb6Q91XZ4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Pcdhb6Q91XZ4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pcdhb6Q91XZ4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pcdhb6Q91XZ4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pcdhb6Q91XZ4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Pcdhb6Q91XZ4 Gm25238-201ENSMUST00000174914 89 ntBASIC29.75■■■□□ 2.35
Pcdhb6Q91XZ4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.73■■■□□ 2.35
Pcdhb6Q91XZ4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.71■■■□□ 2.35
Pcdhb6Q91XZ4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.7■■■□□ 2.35
Pcdhb6Q91XZ4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Pcdhb6Q91XZ4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
Pcdhb6Q91XZ4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pcdhb6Q91XZ4 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.64■■■□□ 2.34
Pcdhb6Q91XZ4 Gm27325-201ENSMUST00000175467 74 ntBASIC29.64■■■□□ 2.34
Pcdhb6Q91XZ4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.62■■■□□ 2.33
Pcdhb6Q91XZ4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.57■■■□□ 2.32
Pcdhb6Q91XZ4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Pcdhb6Q91XZ4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.4■■■□□ 2.3
Pcdhb6Q91XZ4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Pcdhb6Q91XZ4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Pcdhb6Q91XZ4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.37■■■□□ 2.29
Pcdhb6Q91XZ4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Pcdhb6Q91XZ4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.21■■■□□ 2.27
Pcdhb6Q91XZ4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pcdhb6Q91XZ4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Pcdhb6Q91XZ4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pcdhb6Q91XZ4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pcdhb6Q91XZ4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pcdhb6Q91XZ4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pcdhb6Q91XZ4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
Pcdhb6Q91XZ4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
Pcdhb6Q91XZ4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Pcdhb6Q91XZ4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.02■■■□□ 2.24
Pcdhb6Q91XZ4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Pcdhb6Q91XZ4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Pcdhb6Q91XZ4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.96■■■□□ 2.23
Pcdhb6Q91XZ4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.95■■■□□ 2.22
Pcdhb6Q91XZ4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Pcdhb6Q91XZ4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pcdhb6Q91XZ4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pcdhb6Q91XZ4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pcdhb6Q91XZ4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdhb6Q91XZ4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
Pcdhb6Q91XZ4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Pcdhb6Q91XZ4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.76■■■□□ 2.19
Pcdhb6Q91XZ4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms