Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm25239-201ENSMUST00000174915 86 ntBASIC40.54■■■■■ 4.08
Pcdhb18Q91Y02 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
Pcdhb18Q91Y02 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
Pcdhb18Q91Y02 Gm15042-201ENSMUST00000120212 883 ntBASIC35.28■■■■□ 3.24
Pcdhb18Q91Y02 Gm24109-201ENSMUST00000175489 103 ntBASIC35.17■■■■□ 3.22
Pcdhb18Q91Y02 Gm15045-201ENSMUST00000117359 883 ntBASIC34.43■■■■□ 3.1
Pcdhb18Q91Y02 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Pcdhb18Q91Y02 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
Pcdhb18Q91Y02 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
Pcdhb18Q91Y02 Gm23366-201ENSMUST00000175022 89 ntBASIC33.86■■■■□ 3.01
Pcdhb18Q91Y02 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Pcdhb18Q91Y02 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Pcdhb18Q91Y02 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Pcdhb18Q91Y02 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Pcdhb18Q91Y02 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.88■■■□□ 2.85
Pcdhb18Q91Y02 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
Pcdhb18Q91Y02 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
Pcdhb18Q91Y02 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.6■■■□□ 2.81
Pcdhb18Q91Y02 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.57■■■□□ 2.8
Pcdhb18Q91Y02 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Pcdhb18Q91Y02 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Pcdhb18Q91Y02 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Pcdhb18Q91Y02 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.23■■■□□ 2.75
Pcdhb18Q91Y02 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Pcdhb18Q91Y02 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Pcdhb18Q91Y02 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Pcdhb18Q91Y02 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Pcdhb18Q91Y02 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.09■■■□□ 2.73
Pcdhb18Q91Y02 Gm25238-201ENSMUST00000174914 89 ntBASIC32.04■■■□□ 2.72
Pcdhb18Q91Y02 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Pcdhb18Q91Y02 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pcdhb18Q91Y02 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Pcdhb18Q91Y02 Psd-208ENSMUST00000224556 2034 ntBASIC31.68■■■□□ 2.66
Pcdhb18Q91Y02 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.6■■■□□ 2.65
Pcdhb18Q91Y02 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pcdhb18Q91Y02 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
Pcdhb18Q91Y02 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pcdhb18Q91Y02 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pcdhb18Q91Y02 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Pcdhb18Q91Y02 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pcdhb18Q91Y02 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pcdhb18Q91Y02 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.17■■■□□ 2.58
Pcdhb18Q91Y02 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
Pcdhb18Q91Y02 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.05■■■□□ 2.56
Pcdhb18Q91Y02 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Pcdhb18Q91Y02 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.98■■■□□ 2.55
Pcdhb18Q91Y02 Gm27325-201ENSMUST00000175467 74 ntBASIC30.88■■■□□ 2.53
Pcdhb18Q91Y02 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.85■■■□□ 2.53
Pcdhb18Q91Y02 Gm25262-201ENSMUST00000174934 133 ntBASIC30.81■■■□□ 2.52
Pcdhb18Q91Y02 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pcdhb18Q91Y02 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Pcdhb18Q91Y02 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Pcdhb18Q91Y02 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Pcdhb18Q91Y02 Rab21-202ENSMUST00000218831 843 ntBASIC30.44■■■□□ 2.46
Pcdhb18Q91Y02 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pcdhb18Q91Y02 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.41■■■□□ 2.46
Pcdhb18Q91Y02 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.38■■■□□ 2.45
Pcdhb18Q91Y02 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.36■■■□□ 2.45
Pcdhb18Q91Y02 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.32■■■□□ 2.44
Pcdhb18Q91Y02 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pcdhb18Q91Y02 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pcdhb18Q91Y02 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Pcdhb18Q91Y02 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.23■■■□□ 2.43
Pcdhb18Q91Y02 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.17■■■□□ 2.42
Pcdhb18Q91Y02 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
Pcdhb18Q91Y02 Gm26115-201ENSMUST00000175605 87 ntBASIC30.11■■■□□ 2.41
Pcdhb18Q91Y02 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pcdhb18Q91Y02 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pcdhb18Q91Y02 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Pcdhb18Q91Y02 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Pcdhb18Q91Y02 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.97■■■□□ 2.39
Pcdhb18Q91Y02 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pcdhb18Q91Y02 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.95■■■□□ 2.38
Pcdhb18Q91Y02 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.94■■■□□ 2.38
Pcdhb18Q91Y02 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Pcdhb18Q91Y02 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Pcdhb18Q91Y02 Gm8109-201ENSMUST00000194076 746 ntBASIC29.89■■■□□ 2.38
Pcdhb18Q91Y02 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Pcdhb18Q91Y02 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.85■■■□□ 2.37
Pcdhb18Q91Y02 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Pcdhb18Q91Y02 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pcdhb18Q91Y02 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pcdhb18Q91Y02 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Pcdhb18Q91Y02 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Pcdhb18Q91Y02 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.73■■■□□ 2.35
Pcdhb18Q91Y02 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
Pcdhb18Q91Y02 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Pcdhb18Q91Y02 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pcdhb18Q91Y02 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pcdhb18Q91Y02 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Pcdhb18Q91Y02 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Pcdhb18Q91Y02 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Pcdhb18Q91Y02 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.53■■■□□ 2.32
Pcdhb18Q91Y02 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
Pcdhb18Q91Y02 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Pcdhb18Q91Y02 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.46■■■□□ 2.31
Pcdhb18Q91Y02 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Pcdhb18Q91Y02 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
Pcdhb18Q91Y02 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Pcdhb18Q91Y02 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms